LOC100130187 7878

Name: LOC100130187	Sequence: fasta or formatted (98aa)		NCBI GI: 169171220
Description: PREDICTED: hypothetical protein LOC100130187		Not currently referenced in the text
Other entries for this name: alt prot {98aa} PREDICTED: hypothetical protein LOC100130187 alt mRNA {98aa} PREDICTED: hypothetical protein LOC100130187 alt mRNA {98aa} PREDICTED: hypothetical protein LOC100130187
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 6 1 C cysteine 2.0 2 1 D aspartate 5.1 5 1 E glutamate 10.2 10 3 F phenylalanine 6.1 6 1 G glycine 6.1 6 1 H histidine 9.2 9 1 I isoleucine 0.0 0 0 K lysine 6.1 6 1 L leucine 6.1 6 1 M methionine 4.1 4 1 N asparagine 4.1 4 1 P proline 2.0 2 1 Q glutamine 8.2 8 2 R arginine 2.0 2 1 S serine 4.1 4 1 T threonine 5.1 5 1 V valine 7.1 7 2 W tryptophan 2.0 2 1 Y tyrosine 4.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100130187 LOC100130187 1.000 PREDICTED: hypothetical protein LOC100130187 LOC100130187 1.000 PREDICTED: hypothetical protein LOC100130187 LOC100130187 0.989 PREDICTED: hypothetical protein LOC100130187 TUBB2C 0.221 tubulin, beta, 2 TUBB3 0.211 tubulin, beta, 4 TUBB4 0.205 tubulin, beta 4 TUBB2B 0.195 tubulin, beta 2B TUBB2A 0.195 tubulin, beta 2 TUBB 0.189 tubulin, beta TUBB6 0.184 tubulin, beta 6 TUBB4Q 0.184 tubulin, beta polypeptide 4, member Q TUBB8 0.179 tubulin, beta 8 LOC100292044 0.132 PREDICTED: similar to hCG1642465 TUBB1 0.068 beta tubulin 1, class VI LOC100130736 0.058 PREDICTED: similar to hCG1647990 LOC100130736 0.047 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.047 PREDICTED: similar to tubulin, beta 5 RDH11 0.032 retinol dehydrogenase 11 TUBA1B 0.016 tubulin, alpha, ubiquitous TUBA1A 0.016 tubulin, alpha 1a TUBA1C 0.016 tubulin alpha 6 LOC442434 0.016 PREDICTED: similar to hCG1784562 LOC442434 0.016 PREDICTED: similar to hCG1784562 LOC442434 0.016 PREDICTED: similar to hCG1784562 UBR4 0.016 retinoblastoma-associated factor 600 RDH12 0.011 retinol dehydrogenase 12 CEACAM4 0.011 carcinoembryonic antigen-related cell adhesion molec... SRCAP 0.005 Snf2-related CBP activator protein EGFLAM 0.005 EGF-like, fibronectin type III and laminin G domains... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.