LOC100130736 20538

Name: LOC100130736	Sequence: fasta or formatted (365aa)		NCBI GI: 239750785
Description: PREDICTED: similar to tubulin, beta 5		Referenced in: Tubulins and Microtubules
Other entries for this name: alt prot [198aa] PREDICTED: similar to hCG1647990 alt mRNA [365aa] PREDICTED: similar to tubulin, beta 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 24 2 C cysteine 2.5 9 1 D aspartate 4.1 15 1 E glutamate 7.1 26 2 F phenylalanine 4.7 17 2 G glycine 6.0 22 1 H histidine 3.8 14 1 I isoleucine 3.8 14 1 K lysine 4.1 15 1 L leucine 7.9 29 2 M methionine 6.0 22 2 N asparagine 4.4 16 2 P proline 6.3 23 2 Q glutamine 4.9 18 2 R arginine 2.7 10 1 S serine 8.2 30 2 T threonine 7.9 29 2 V valine 5.5 20 1 W tryptophan 1.1 4 1 X unknown 0.5 2 1 Y tyrosine 1.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to tubulin, beta 5 LOC100130736 1.000 PREDICTED: similar to tubulin, beta 5 TUBB 0.537 tubulin, beta TUBB2B 0.531 tubulin, beta 2B TUBB2A 0.530 tubulin, beta 2 TUBB2C 0.530 tubulin, beta, 2 TUBB4 0.527 tubulin, beta 4 TUBB3 0.512 tubulin, beta, 4 TUBB6 0.509 tubulin, beta 6 TUBB8 0.488 tubulin, beta 8 TUBB4Q 0.484 tubulin, beta polypeptide 4, member Q TUBB1 0.448 beta tubulin 1, class VI LOC100130736 0.381 PREDICTED: similar to hCG1647990 TUBA1C 0.153 tubulin alpha 6 TUBA1B 0.151 tubulin, alpha, ubiquitous TUBA1A 0.148 tubulin, alpha 1a TUBA4A 0.148 tubulin, alpha 4a TUBA3D 0.146 tubulin, alpha 3d TUBA3C 0.146 tubulin, alpha 3c TUBA3E 0.141 tubulin, alpha 3e TUBA8 0.139 tubulin, alpha 8 TUBAL3 0.137 tubulin, alpha-like 3 TUBG2 0.121 tubulin, gamma 2 TUBG1 0.117 tubulin, gamma 1 LOC442434 0.107 PREDICTED: similar to hCG1784562 LOC442434 0.107 PREDICTED: similar to hCG1784562 LOC442434 0.107 PREDICTED: similar to hCG1784562 TUBE1 0.093 tubulin, epsilon 1 LOC100292044 0.036 PREDICTED: similar to hCG1642465 TUBD1 0.031 delta-tubulin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.