Search of human proteins with 169204921

Search of human proteins with 169204921

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169204921 PREDICTED: chromosome 12 open reading frame 55
[Homo sapiens]
         (935 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169204921 PREDICTED: chromosome 12 open reading frame 55 [Hom...  1863   0.0  
gi|169205589 PREDICTED: chromosome 12 open reading frame 55 [Hom...  1816   0.0  
gi|169203876 PREDICTED: hypothetical protein [Homo sapiens]          1813   0.0  
gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo sap...    35   0.43 
gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo sa...    35   0.43 
gi|239753555 PREDICTED: hypothetical protein XP_002345695 [Homo ...    33   0.95 
gi|58761508 midnolin [Homo sapiens]                                    32   2.1  
gi|40353729 Ras and Rab interactor 3 [Homo sapiens]                    32   2.8  
gi|19743886 regulatory factor X4 isoform a [Homo sapiens]              31   4.7  
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]            31   4.7  
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ...    31   4.7  
gi|47132527 regulatory factor X4 isoform c [Homo sapiens]              31   4.7  
gi|188219559 protein phosphatase 1, regulatory subunit 15B [Homo...    31   4.7  
gi|156105697 ring finger and CCCH-type zinc finger domains 2 iso...    31   6.2  
gi|156105699 ring finger and CCCH-type zinc finger domains 2 iso...    31   6.2  
gi|189011544 ubiquitously transcribed tetratricopeptide repeat, ...    30   8.0  
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi...    30   8.0  
gi|116284392 mucin 2 precursor [Homo sapiens]                          30   8.0  
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]              30   8.0  
gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo ...    30   8.0  
gi|151301053 RNA binding motif protein 33 [Homo sapiens]               30   8.0  
gi|118918395 fibronectin type III domain containing 3A isoform 1...    30   8.0  
gi|118918397 fibronectin type III domain containing 3A isoform 2...    30   8.0  
gi|21361302 serine (or cysteine) proteinase inhibitor, clade A (...    30   8.0  
gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo sap...    30   8.0  
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap...    30   8.0  
gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo sap...    30   8.0  

>gi|169204921 PREDICTED: chromosome 12 open reading frame 55 [Homo
           sapiens]
          Length = 935

 Score = 1863 bits (4826), Expect = 0.0
 Identities = 935/935 (100%), Positives = 935/935 (100%)

Query: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60
           MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV
Sbjct: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60

Query: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120
           FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR
Sbjct: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120

Query: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180
           LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG
Sbjct: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180

Query: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240
           FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL
Sbjct: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240

Query: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300
           CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV
Sbjct: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300

Query: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360
           CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR
Sbjct: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360

Query: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420
           GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN
Sbjct: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420

Query: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480
           RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI
Sbjct: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480

Query: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540
           SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK
Sbjct: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540

Query: 541 RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600
           RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ
Sbjct: 541 RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600

Query: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660
           PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME
Sbjct: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660

Query: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720
           DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF
Sbjct: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720

Query: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780
           TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS
Sbjct: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780

Query: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKVSWYCILGCKAEGSYGKVR 840
           YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKVSWYCILGCKAEGSYGKVR
Sbjct: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKVSWYCILGCKAEGSYGKVR 840

Query: 841 LNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGETTKPILVY 900
           LNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGETTKPILVY
Sbjct: 841 LNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGETTKPILVY 900

Query: 901 PPLSTITARMFLTQLLPDLKHVTSEEDARKSDSLT 935
           PPLSTITARMFLTQLLPDLKHVTSEEDARKSDSLT
Sbjct: 901 PPLSTITARMFLTQLLPDLKHVTSEEDARKSDSLT 935


>gi|169205589 PREDICTED: chromosome 12 open reading frame 55 [Homo
           sapiens]
          Length = 1241

 Score = 1816 bits (4705), Expect = 0.0
 Identities = 914/922 (99%), Positives = 915/922 (99%), Gaps = 7/922 (0%)

Query: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60
           MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV
Sbjct: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60

Query: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120
           FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR
Sbjct: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120

Query: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180
           LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG
Sbjct: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180

Query: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240
           FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL
Sbjct: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240

Query: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300
           CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV
Sbjct: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300

Query: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360
           CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR
Sbjct: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360

Query: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420
           GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN
Sbjct: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420

Query: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480
           RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI
Sbjct: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480

Query: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540
           SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK
Sbjct: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540

Query: 541 RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600
           RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ
Sbjct: 541 RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600

Query: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660
           PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME
Sbjct: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660

Query: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720
           DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF
Sbjct: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720

Query: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780
           TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS
Sbjct: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780

Query: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVK-------VSWYCILGCKAE 833
           YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVK       VSWYCILGCKAE
Sbjct: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE 840

Query: 834 GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 893
           GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET
Sbjct: 841 GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 900

Query: 894 TKPILVYPPLSTITARMFLTQL 915
           TKPILVYPPLSTITARMFLTQ+
Sbjct: 901 TKPILVYPPLSTITARMFLTQV 922


>gi|169203876 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1241

 Score = 1813 bits (4695), Expect = 0.0
 Identities = 912/922 (98%), Positives = 913/922 (99%), Gaps = 7/922 (0%)

Query: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60
           MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV
Sbjct: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60

Query: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120
           FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR
Sbjct: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120

Query: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180
           LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG
Sbjct: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180

Query: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240
           FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL
Sbjct: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240

Query: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300
           CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV
Sbjct: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300

Query: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360
           CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR
Sbjct: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360

Query: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420
           GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN
Sbjct: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420

Query: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480
           RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI
Sbjct: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480

Query: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540
           SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK
Sbjct: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540

Query: 541 RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600
           RNKGLIFPLENYKEGQS QIY KKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ
Sbjct: 541 RNKGLIFPLENYKEGQSTQIYLKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600

Query: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660
           PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME
Sbjct: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660

Query: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720
           DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF
Sbjct: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720

Query: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780
           TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS
Sbjct: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780

Query: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVK-------VSWYCILGCKAE 833
           YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVK       VSWYCILGCKAE
Sbjct: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE 840

Query: 834 GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 893
           GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET
Sbjct: 841 GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 900

Query: 894 TKPILVYPPLSTITARMFLTQL 915
           TKPILVYPPLSTITARMFLTQ+
Sbjct: 901 TKPILVYPPLSTITARMFLTQV 922


>gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo
           sapiens]
          Length = 1048

 Score = 34.7 bits (78), Expect = 0.43
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1   MAAQGSPSSSPSDD-STTSGSLPELPPTSTATSRSPPE-SKGSSRSSLLQWTCPEDSLPL 58
           M A  SP S P+   ST  G++P  PP +T  +  PP  + G S SS+L    PE  +  
Sbjct: 727 MIAAASPPSQPAVALSTIPGAVPITPPITTIAAAPPPSVTVGGSLSSVLGPPVPEIKVKE 786

Query: 59  AVFYGPLDAKNPLLA 73
            V   P+D   P+ A
Sbjct: 787 EV--EPMDIMRPVSA 799


>gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo
           sapiens]
          Length = 1083

 Score = 34.7 bits (78), Expect = 0.43
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1   MAAQGSPSSSPSDD-STTSGSLPELPPTSTATSRSPPE-SKGSSRSSLLQWTCPEDSLPL 58
           M A  SP S P+   ST  G++P  PP +T  +  PP  + G S SS+L    PE  +  
Sbjct: 762 MIAAASPPSQPAVALSTIPGAVPITPPITTIAAAPPPSVTVGGSLSSVLGPPVPEIKVKE 821

Query: 59  AVFYGPLDAKNPLLA 73
            V   P+D   P+ A
Sbjct: 822 EV--EPMDIMRPVSA 834


>gi|239753555 PREDICTED: hypothetical protein XP_002345695 [Homo
           sapiens]
          Length = 258

 Score = 33.5 bits (75), Expect = 0.95
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 782 QKYLESSKRKKSRVPPPP-ILLSRTHCSVTLKPAPFTSEVKVSWYCILGCKAEGSYGKVR 840
           QK   S KR++ R+PPPP    SR        P P       S  C   C+  G  G  R
Sbjct: 135 QKQWPSRKRERPRLPPPPGSRKSRLRRWARASPHPGELAGLTSRLCPATCRGRGR-GLAR 193

Query: 841 LNNNHLPNSGEA 852
               H+P SG +
Sbjct: 194 AQATHIPLSGHS 205


>gi|58761508 midnolin [Homo sapiens]
          Length = 468

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%)

Query: 2   AAQGSPS-----SSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPE 53
           AA+G PS     SSP    +++  +P +P TS + +   P + GS RS     TCPE
Sbjct: 177 AARGDPSIASPVSSPCRPVSSAARVPPVP-TSPSPASPSPITAGSFRSHAASTTCPE 232


>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
          Length = 985

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 5   GSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAVFYGP 64
           G P    S  S      P  P  +TA S+S PE KGS  S         DSL ++V    
Sbjct: 496 GPPREGQSPASQAGTQHP--PAQATAHSQSSPEFKGSLASL-------SDSLGVSVMATD 546

Query: 65  LDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPRLPAD 124
            D+ +   +S E+E+++      KKK      + +H       +S+F+ +          
Sbjct: 547 QDSYS--TSSTEEELEQFSSPSVKKKPSMILGKARHRLSFASFSSMFHAFLS-------- 596

Query: 125 YYNEKLLKVGDSLCQMK-EYKLALLQCYGRY 154
             N KL K    L Q K  Y  +L+Q Y  Y
Sbjct: 597 -NNRKLYKKVVELAQDKGSYFGSLVQDYKVY 626


>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
          Length = 641

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 2   AAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQ 48
           AA  +PS  PS     S +  E+PP S+  S   PE  G S +  +Q
Sbjct: 408 AAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQ 454


>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 7   PSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSS 45
           PSSSPS  S+ S S P   P+S++    PP     S SS
Sbjct: 174 PSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSS 212


>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
           sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 7   PSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSS 45
           PSSSPS  S+ S S P   P+S++    PP     S SS
Sbjct: 174 PSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSS 212


>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
          Length = 735

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 2   AAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQ 48
           AA  +PS  PS     S +  E+PP S+  S   PE  G S +  +Q
Sbjct: 502 AAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQ 548


>gi|188219559 protein phosphatase 1, regulatory subunit 15B [Homo
           sapiens]
          Length = 713

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 10  SPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWT--CPEDSLPLAVFYGPLDA 67
           S  ++S+ SGSLPE P  S+       ES      SL  W   C  D       Y PL+ 
Sbjct: 518 SDLENSSQSGSLPETPEHSSG-EEDDWESSADEAESLKLWNSFCNSDDP-----YNPLNF 571

Query: 68  KNPLLASCEKE 78
           K P   S E E
Sbjct: 572 KAPFQTSGENE 582


>gi|156105697 ring finger and CCCH-type zinc finger domains 2
           isoform 1 [Homo sapiens]
          Length = 1191

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 1   MAAQGSPSSSPSDDSTTS---GSLPELPPTSTATSRSPPESKGSSRSSLLQWTCP 52
           + A G  ++ PS DS T    GS P+ P ++ A + + P + G+  +S+ Q + P
Sbjct: 527 VGANGQNAAGPSADSVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSP 581


>gi|156105699 ring finger and CCCH-type zinc finger domains 2
           isoform 2 [Homo sapiens]
          Length = 1064

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 1   MAAQGSPSSSPSDDSTTS---GSLPELPPTSTATSRSPPESKGSSRSSLLQWTCP 52
           + A G  ++ PS DS T    GS P+ P ++ A + + P + G+  +S+ Q + P
Sbjct: 527 VGANGQNAAGPSADSVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSP 581


>gi|189011544 ubiquitously transcribed tetratricopeptide repeat, X
           chromosome [Homo sapiens]
          Length = 1401

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 735 SKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYSYQKYLESSK 789
           S AI  +QK+L   E D  S  SW  L   YS I ++   Q+A  SY++ ++ S+
Sbjct: 267 SYAIQYLQKSL---EADPNSGQSWYFLGRCYSSIGKV---QDAFISYRQSIDKSE 315


>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
           sapiens]
          Length = 862

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 2   AAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKG 40
           +  GSPS++   D +++GS   LPPT+T T+ S   + G
Sbjct: 228 SVNGSPSATSESDGSSTGS---LPPTNTNTNTSEGATSG 263


>gi|116284392 mucin 2 precursor [Homo sapiens]
          Length = 5179

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 6    SPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSS 45
            +P S+P+  +TTSG     PP ST TS     ++G++  S
Sbjct: 4251 APPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGS 4290


>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
          Length = 2639

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 6    SPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSS 45
            +P S+P+  +TTSG     PP ST TS     ++G++  S
Sbjct: 1711 APPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGS 1750


>gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo
           sapiens]
          Length = 324

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 85  FMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPRLPA 123
           F  KK     T E K +FRRR   SL N+  K  PR+PA
Sbjct: 154 FSSKKLVSWDTSERKRQFRRRMF-SLANMRVKMPPRIPA 191


>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
          Length = 1170

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFT 817
           +  +L   +R     PPPP LL+ +H   T  P PFT
Sbjct: 471 FPSHLFLEQRSPPPPPPPPTLLNSSHPVPTQSPLPFT 507


>gi|118918395 fibronectin type III domain containing 3A isoform 1
           [Homo sapiens]
          Length = 1198

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 800 ILLSRTHCSVTLKPAPFTSEVKVSWYCILGCKAEGSYGKVRLN-----NNHLPNSGEAIP 854
           +L   + C+ ++  +P  ++  ++W  +   K  G+     ++            G    
Sbjct: 458 VLYYTSGCAPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPK 517

Query: 855 ADGKSV-FEVKGLETNEKYVFAVAAYSNNGK 884
            DG+ + + VK L  + KY F V AY++ GK
Sbjct: 518 YDGEDLAYTVKNLRRSTKYKFKVIAYNSEGK 548


>gi|118918397 fibronectin type III domain containing 3A isoform 2
           [Homo sapiens]
          Length = 1142

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 800 ILLSRTHCSVTLKPAPFTSEVKVSWYCILGCKAEGSYGKVRLN-----NNHLPNSGEAIP 854
           +L   + C+ ++  +P  ++  ++W  +   K  G+     ++            G    
Sbjct: 402 VLYYTSGCAPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPK 461

Query: 855 ADGKSV-FEVKGLETNEKYVFAVAAYSNNGK 884
            DG+ + + VK L  + KY F V AY++ GK
Sbjct: 462 YDGEDLAYTVKNLRRSTKYKFKVIAYNSEGK 492


>gi|21361302 serine (or cysteine) proteinase inhibitor, clade A
           (alpha-1 antiproteinase, antitrypsin), member 4 [Homo
           sapiens]
          Length = 427

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 658 KMEDIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGST 717
           KM +I+ V+  E+ +R + +L       R F + L L  P  S   S    + L + G T
Sbjct: 285 KMREIEEVLTPEMLMRWNNLLRK-----RNFYKKLELHLPKFSISGSYVLDQILPRLGFT 339

Query: 718 DCFTELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSS 757
           D F++   ++ I K    +A     KA L  ++  T  ++
Sbjct: 340 DLFSKWADLSGITKQQKLEASKSFHKATLDVDEAGTEAAA 379


>gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo
           sapiens]
          Length = 1347

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 735 SKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYSYQKYLESSK 789
           S AI  +QK+L   E D  S  SW  L   YS I ++   Q+A  SY++ ++ S+
Sbjct: 264 SYAIQYLQKSL---EADPNSGQSWYFLGRCYSSIGKV---QDAFISYRQSIDKSE 312


>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo
           sapiens]
          Length = 1079

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 735 SKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYSYQKYLESSK 789
           S AI  +QK+L   E D  S  SW  L   YS I ++   Q+A  SY++ ++ S+
Sbjct: 264 SYAIQYLQKSL---EADPNSGQSWYFLGRCYSSIGKV---QDAFISYRQSIDKSE 312


>gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo
           sapiens]
          Length = 1240

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 735 SKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYSYQKYLESSK 789
           S AI  +QK+L   E D  S  SW  L   YS I ++   Q+A  SY++ ++ S+
Sbjct: 264 SYAIQYLQKSL---EADPNSGQSWYFLGRCYSSIGKV---QDAFISYRQSIDKSE 312


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,149,007
Number of Sequences: 37866
Number of extensions: 1486980
Number of successful extensions: 6191
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6123
Number of HSP's gapped (non-prelim): 80
length of query: 935
length of database: 18,247,518
effective HSP length: 112
effective length of query: 823
effective length of database: 14,006,526
effective search space: 11527370898
effective search space used: 11527370898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.