RFX4 11505

Name: RFX4	Sequence: fasta or formatted (641aa)		NCBI GI: 19743886
Description: regulatory factor X4 isoform a		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [563aa] regulatory factor X4 isoform b alt prot [735aa] regulatory factor X4 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 39 3 C cysteine 1.6 10 1 D aspartate 3.4 22 2 E glutamate 6.1 39 2 F phenylalanine 3.4 22 2 G glycine 4.4 28 2 H histidine 4.1 26 1 I isoleucine 4.2 27 2 K lysine 3.6 23 2 L leucine 8.4 54 2 M methionine 3.4 22 2 N asparagine 3.4 22 1 P proline 7.6 49 3 Q glutamine 4.5 29 2 R arginine 5.1 33 2 S serine 10.8 69 3 T threonine 7.2 46 2 V valine 6.1 39 2 W tryptophan 1.7 11 1 Y tyrosine 4.8 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 regulatory factor X4 isoform a RFX4 0.947 regulatory factor X4 isoform c RFX4 0.630 regulatory factor X4 isoform b RFX6 0.237 regulatory factor X, 6 RFX1 0.133 regulatory factor X1 RFX3 0.130 regulatory factor X3 isoform a RFX2 0.130 regulatory factor X2 isoform b RFX2 0.130 regulatory factor X2 isoform a RFX3 0.129 regulatory factor X3 isoform b LOC731220 0.046 hypothetical protein LOC731220 POLR2A 0.019 DNA-directed RNA polymerase II A LOC100294420 0.015 PREDICTED: similar to mucin 2 WNK4 0.015 WNK lysine deficient protein kinase 4 MUC2 0.014 mucin 2 precursor MUC6 0.014 mucin 6, gastric RNF111 0.014 ring finger protein 111 SOX30 0.012 SRY (sex determining region Y)-box 30 isoform a [Hom... GLIS3 0.012 GLIS family zinc finger 3 isoform a GLIS3 0.012 GLIS family zinc finger 3 isoform b LOC100134147 0.011 PREDICTED: hypothetical protein MUC4 0.011 mucin 4 isoform a OTX1 0.011 orthodenticle homeobox 1 MUC17 0.011 mucin 17 NUP214 0.010 nucleoporin 214kDa LOC100128719 0.010 PREDICTED: hypothetical protein, partial LOC100128719 0.010 PREDICTED: hypothetical protein, partial RICH2 0.010 Rho GTPase-activating protein RICH2 MUC16 0.009 mucin 16 MUC7 0.009 mucin 7, secreted precursor MUC3B 0.009 PREDICTED: mucin 3B, cell surface associated, parti... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.