RFX4 30421

Name: RFX4	Sequence: fasta or formatted (735aa)		NCBI GI: 47132527
Description: regulatory factor X4 isoform c		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [563aa] regulatory factor X4 isoform b alt prot [641aa] regulatory factor X4 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 43 3 C cysteine 1.8 13 1 D aspartate 3.5 26 2 E glutamate 6.9 51 2 F phenylalanine 3.0 22 1 G glycine 4.2 31 1 H histidine 4.1 30 1 I isoleucine 3.8 28 2 K lysine 3.9 29 2 L leucine 8.6 63 2 M methionine 3.3 24 2 N asparagine 4.1 30 2 P proline 7.2 53 3 Q glutamine 4.6 34 2 R arginine 5.3 39 2 S serine 10.6 78 3 T threonine 7.2 53 2 V valine 5.7 42 2 W tryptophan 1.5 11 1 Y tyrosine 4.8 35 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 regulatory factor X4 isoform c RFX4 0.824 regulatory factor X4 isoform a RFX4 0.706 regulatory factor X4 isoform b RFX6 0.274 regulatory factor X, 6 RFX1 0.177 regulatory factor X1 RFX2 0.177 regulatory factor X2 isoform b RFX2 0.171 regulatory factor X2 isoform a RFX3 0.170 regulatory factor X3 isoform a RFX3 0.169 regulatory factor X3 isoform b LOC731220 0.040 hypothetical protein LOC731220 RFX7 0.030 regulatory factor X domain containing 2 RFX5 0.028 regulatory factor X, 5 RFX5 0.028 regulatory factor X, 5 POLR2A 0.016 DNA-directed RNA polymerase II A LOC100294420 0.013 PREDICTED: similar to mucin 2 WNK4 0.013 WNK lysine deficient protein kinase 4 MUC2 0.012 mucin 2 precursor MUC6 0.012 mucin 6, gastric RNF111 0.012 ring finger protein 111 SOX30 0.011 SRY (sex determining region Y)-box 30 isoform a [Hom... GLIS3 0.010 GLIS family zinc finger 3 isoform a GLIS3 0.010 GLIS family zinc finger 3 isoform b ARID2 0.010 AT rich interactive domain 2 (ARID, RFX-like) LOC100134147 0.009 PREDICTED: hypothetical protein MUC4 0.009 mucin 4 isoform a OTX1 0.009 orthodenticle homeobox 1 MUC17 0.009 mucin 17 NUP214 0.009 nucleoporin 214kDa LOC100128719 0.009 PREDICTED: hypothetical protein, partial LOC100128719 0.009 PREDICTED: hypothetical protein, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.