Guide to the Human Genome
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Name: TIMM23B Sequence: fasta or formatted (61aa) NCBI GI: 169194838
Description:

PREDICTED: translocase of inner mitochondrial membrane 23 homolog B (yeast)

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2          5           1
 C cysteine            0.0          0           0
 D aspartate           3.3          2           1
 E glutamate           1.6          1           1
 F phenylalanine       4.9          3           2
 G glycine            23.0         14           4
 H histidine           1.6          1           1
 I isoleucine          0.0          0           0
 K lysine              1.6          1           1
 L leucine            11.5          7           1
 M methionine          3.3          2           1
 N asparagine          4.9          3           1
 P proline             6.6          4           1
 Q glutamine           1.6          1           1
 R arginine            4.9          3           1
 S serine              4.9          3           1
 T threonine           4.9          3           2
 V valine              6.6          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            6.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: translocase of inner mitochondrial membr... 
TIMM23                0.886   translocase of inner mitochondrial membrane 23 (yeast...
LOC100287932          0.886   PREDICTED: hypothetical protein XP_002343028 isofor...
LOC100287932          0.886   PREDICTED: hypothetical protein XP_002343027 isofor...
LOR                   0.095   loricrin 
TLX1                  0.095   T-cell leukemia homeobox 1 
PHC1                  0.086   polyhomeotic 1-like 
SIX3                  0.067   sine oculis homeobox homolog 3 
ONECUT3               0.067   one cut homeobox 3 
GATAD1                0.057   GATA zinc finger domain containing 1 
ARID1B                0.048   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.048   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.048   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
LOC120364             0.048   PREDICTED: similar to heterogeneous nuclear ribonuc...
NBEA                  0.048   neurobeachin 
LOC120364             0.038   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.038   PREDICTED: similar to heterogeneous nuclear ribonucl...
ZFHX3                 0.038   AT-binding transcription factor 1 
GAR1                  0.038   nucleolar protein family A, member 1 
GAR1                  0.038   nucleolar protein family A, member 1 
MYOZ1                 0.038   myozenin 1 
KRT1                  0.029   keratin 1 
KRT9                  0.029   keratin 9 
SHOX2                 0.029   short stature homeobox 2 isoform a 
TRIO                  0.029   triple functional domain (PTPRF interacting) 
TRIM67                0.029   tripartite motif-containing 67 
NFKB2                 0.029   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.029   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.029   nuclear factor of kappa light polypeptide gene enha...
WIPF1                 0.029   WAS/WASL interacting protein family, member 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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