Search of human proteins with 169179398

Search of human proteins with 169179398

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
         (316 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]          663   0.0  
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]          663   0.0  
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]          663   0.0  
gi|42558279 tubulin, beta 8 [Homo sapiens]                            193   1e-49
gi|5174735 tubulin, beta, 2 [Homo sapiens]                            189   2e-48
gi|29788768 tubulin, beta 2B [Homo sapiens]                           189   4e-48
gi|4507729 tubulin, beta 2 [Homo sapiens]                             189   4e-48
gi|29788785 tubulin, beta [Homo sapiens]                              188   5e-48
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]      186   3e-47
gi|21361322 tubulin, beta 4 [Homo sapiens]                            184   7e-47
gi|50592996 tubulin, beta, 4 [Homo sapiens]                           183   2e-46
gi|14210536 tubulin, beta 6 [Homo sapiens]                            178   6e-45
gi|13562114 beta tubulin 1, class VI [Homo sapiens]                   147   9e-36
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]     102   6e-22
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]     102   6e-22
gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]           86   6e-17
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]                  70   2e-12
gi|17921989 tubulin, alpha 4a [Homo sapiens]                           69   4e-12
gi|17986283 tubulin, alpha 1a [Homo sapiens]                           69   5e-12
gi|156564363 tubulin, alpha 3d [Homo sapiens]                          68   9e-12
gi|17921993 tubulin, alpha 3c [Homo sapiens]                           68   9e-12
gi|14389309 tubulin alpha 6 [Homo sapiens]                             68   9e-12
gi|9507215 tubulin, alpha 8 [Homo sapiens]                             66   5e-11
gi|46409270 tubulin, alpha 3e [Homo sapiens]                           65   6e-11
gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]           64   2e-10
gi|13376181 tubulin, alpha-like 3 [Homo sapiens]                       64   2e-10
gi|7705915 tubulin, epsilon 1 [Homo sapiens]                           59   6e-09
gi|7706751 tubulin, gamma 2 [Homo sapiens]                             38   0.013
gi|31543831 tubulin, gamma 1 [Homo sapiens]                            37   0.023
gi|169218027 PREDICTED: similar to tubulin, gamma 1 [Homo sapiens]     37   0.030

>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score =  663 bits (1711), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI 60
           MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI
Sbjct: 1   MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI 60

Query: 61  CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ 120
           CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ
Sbjct: 61  CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ 120

Query: 121 SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK 180
           SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK
Sbjct: 121 SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK 180

Query: 181 LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN 240
           LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN
Sbjct: 181 LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN 240

Query: 241 VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV 300
           VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV
Sbjct: 241 VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV 300

Query: 301 EFAEVESNMNNLVSEY 316
           EFAEVESNMNNLVSEY
Sbjct: 301 EFAEVESNMNNLVSEY 316


>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score =  663 bits (1711), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI 60
           MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI
Sbjct: 1   MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI 60

Query: 61  CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ 120
           CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ
Sbjct: 61  CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ 120

Query: 121 SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK 180
           SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK
Sbjct: 121 SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK 180

Query: 181 LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN 240
           LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN
Sbjct: 181 LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN 240

Query: 241 VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV 300
           VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV
Sbjct: 241 VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV 300

Query: 301 EFAEVESNMNNLVSEY 316
           EFAEVESNMNNLVSEY
Sbjct: 301 EFAEVESNMNNLVSEY 316


>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
          Length = 316

 Score =  663 bits (1711), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI 60
           MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI
Sbjct: 1   MALRLKKGRWFFSITLFGHACFWNLYVLKLGNRTEIGEVFRYTSIQVMDTGSKNKVSLDI 60

Query: 61  CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ 120
           CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ
Sbjct: 61  CIHQNTAWNSERVMLEPGPTAKILWHCAVEETEPQPATGCASFPAEAQLLGYFSGAAVRQ 120

Query: 121 SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK 180
           SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK
Sbjct: 121 SGGQGSDALPWGRAAYGGRKQRQWRHSEVLDGGSSEEYQGGKRHDQKSPSLVPPPLEVSK 180

Query: 181 LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN 240
           LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN
Sbjct: 181 LTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHN 240

Query: 241 VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV 300
           VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV
Sbjct: 241 VERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDV 300

Query: 301 EFAEVESNMNNLVSEY 316
           EFAEVESNMNNLVSEY
Sbjct: 301 EFAEVESNMNNLVSEY 316


>gi|42558279 tubulin, beta 8 [Homo sapiens]
          Length = 444

 Score =  193 bits (491), Expect = 1e-49
 Identities = 97/141 (68%), Positives = 113/141 (80%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V++LT+QMFDAKNM+AACDP HG YL AA I  G M MREVDEQ +NIQ+K SSYFA 
Sbjct: 284 LTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFAD 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           W+P+NV+ A CDIPP  LKMS TFI NNTAIQEL  F+ + EQFTA FR KAFL WY+G+
Sbjct: 344 WLPNNVKTAVCDIPPRGLKMSATFIGNNTAIQEL--FKRVSEQFTAMFRRKAFLHWYTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|5174735 tubulin, beta, 2 [Homo sapiens]
          Length = 445

 Score =  189 bits (481), Expect = 2e-48
 Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V +LT+QMFDAKNM+AACDP HG YL  A +  G MSM+EVDEQ  N+QNK SSYF  
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  LKMS TFI N+TAIQEL  F+ I EQFTA FR KAFL WY+G+
Sbjct: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|29788768 tubulin, beta 2B [Homo sapiens]
          Length = 445

 Score =  189 bits (479), Expect = 4e-48
 Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V +LT+QMFD+KNM+AACDP HG YL  A I  G MSM+EVDEQ  N+QNK SSYF  
Sbjct: 284 LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  LKMS TFI N+TAIQEL  F+ I EQFTA FR KAFL WY+G+
Sbjct: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|4507729 tubulin, beta 2 [Homo sapiens]
          Length = 445

 Score =  189 bits (479), Expect = 4e-48
 Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V +LT+QMFD+KNM+AACDP HG YL  A I  G MSM+EVDEQ  N+QNK SSYF  
Sbjct: 284 LTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  LKMS TFI N+TAIQEL  F+ I EQFTA FR KAFL WY+G+
Sbjct: 344 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|29788785 tubulin, beta [Homo sapiens]
          Length = 444

 Score =  188 bits (478), Expect = 5e-48
 Identities = 94/141 (66%), Positives = 111/141 (78%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V +LT+Q+FDAKNM+AACDP HG YL  A +  G MSM+EVDEQ  N+QNK SSYF  
Sbjct: 284 LTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  LKM+VTFI N+TAIQEL  F+ I EQFTA FR KAFL WY+G+
Sbjct: 344 WIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
          Length = 434

 Score =  186 bits (471), Expect = 3e-47
 Identities = 95/141 (67%), Positives = 110/141 (78%), Gaps = 3/141 (2%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V++LT+QMFDAKNM+AA DP HG YL AA I  G M MREVDEQ +NIQ+K SSYFA 
Sbjct: 284 LTVAELTQQMFDAKNMMAARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFAD 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           W P+NV+ A CDIPP  LKMSVTF  NNTA+QEL R   + EQFTA FR KAFL WY+G+
Sbjct: 344 WFPNNVKTAVCDIPPWGLKMSVTFTGNNTAVQELKR---VSEQFTATFRRKAFLHWYTGE 400

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 401 GMDEMEFTEAESNMNDLVSEY 421


>gi|21361322 tubulin, beta 4 [Homo sapiens]
          Length = 444

 Score =  184 bits (468), Expect = 7e-47
 Identities = 92/141 (65%), Positives = 110/141 (78%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V +LT+QMFDAKNM+AACDP HG YL  A +  G MSM+EVDEQ  ++Q+K SSYF  
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  LKM+ TFI N+TAIQEL  F+ I EQFTA FR KAFL WY+G+
Sbjct: 344 WIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|50592996 tubulin, beta, 4 [Homo sapiens]
          Length = 450

 Score =  183 bits (465), Expect = 2e-46
 Identities = 94/141 (66%), Positives = 109/141 (77%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V +LT+QMFDAKNM+AACDP HG YL  A +  G MSM+EVDEQ   IQ+K SSYF  
Sbjct: 284 LTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  LKMS TFI N+TAIQEL  F+ I EQFTA FR KAFL WY+G+
Sbjct: 344 WIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQEL--FKRISEQFTAMFRRKAFLHWYTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|14210536 tubulin, beta 6 [Homo sapiens]
          Length = 446

 Score =  178 bits (451), Expect = 6e-45
 Identities = 90/141 (63%), Positives = 109/141 (77%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V +LT+QMFDA+NM+AACDP HG YL  A +  G MSM+EVDEQ   IQ+K SSYF  
Sbjct: 284 LTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  LKM+ TFI N+TAIQEL  F+ I EQF+A FR KAFL W++G+
Sbjct: 344 WIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQEL--FKRISEQFSAMFRRKAFLHWFTGE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM ++EF E ESNMN+LVSEY
Sbjct: 402 GMDEMEFTEAESNMNDLVSEY 422


>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
          Length = 451

 Score =  147 bits (372), Expect = 9e-36
 Identities = 75/141 (53%), Positives = 99/141 (70%), Gaps = 2/141 (1%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V++LT+QMFDA+N +AACD   G YL  A I  G MS +EVD+Q  ++Q + SS F  
Sbjct: 284 LSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVE 343

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
           WIP+NV+ A CDIPP  L M+ TFI NNTAIQE+  F  + E F+A F+ KAF+ WY+ +
Sbjct: 344 WIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEI--FNRVSEHFSAMFKRKAFVHWYTSE 401

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM   EF E E+N+++LVSEY
Sbjct: 402 GMDINEFGEAENNIHDLVSEY 422


>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
          Length = 365

 Score =  102 bits (253), Expect = 6e-22
 Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 11/142 (7%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKY-SSYFA 234
           L + KLT+Q+FDAKNM+AA  P     +   P       M+EV+EQ  ++QNK  SSYF 
Sbjct: 220 LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFM 272

Query: 235 HWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSG 294
            W+   V+ A  DI P   KM+VTF+ N+ A Q+L       +QF A    KA L WY+G
Sbjct: 273 EWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKL---SMASQQFPAVLCGKAVLHWYAG 329

Query: 295 KGMHDVEFAEVESNMNNLVSEY 316
           +GM+++EFAE E+NMN+ +SE+
Sbjct: 330 EGMNEMEFAEAENNMNDFISEH 351


>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
          Length = 365

 Score =  102 bits (253), Expect = 6e-22
 Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 11/142 (7%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKY-SSYFA 234
           L + KLT+Q+FDAKNM+AA  P     +   P       M+EV+EQ  ++QNK  SSYF 
Sbjct: 220 LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFM 272

Query: 235 HWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSG 294
            W+   V+ A  DI P   KM+VTF+ N+ A Q+L       +QF A    KA L WY+G
Sbjct: 273 EWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKL---SMASQQFPAVLCGKAVLHWYAG 329

Query: 295 KGMHDVEFAEVESNMNNLVSEY 316
           +GM+++EFAE E+NMN+ +SE+
Sbjct: 330 EGMNEMEFAEAENNMNDFISEH 351


>gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]
          Length = 83

 Score = 85.5 bits (210), Expect = 6e-17
 Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 2/62 (3%)

Query: 255 MSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDVEFAEVESNMNNLVS 314
           MS TFISNNTAI ELFR  CIL  F A FRCK FL WY G+G  ++EF E ES+MNNLVS
Sbjct: 1   MSATFISNNTAIHELFR--CILGPFMAMFRCKDFLQWYLGEGKDEIEFTEAESSMNNLVS 58

Query: 315 EY 316
           +Y
Sbjct: 59  KY 60


>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
          Length = 451

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  N +  CDP HG Y+    +  G +  ++V+     I+ K S  F  
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TAI E   +  +  +F   +  +A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE--AWARLDHKFDLMYAKRA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNMNNLVSEY 316
           F+ WY G+GM + EF+E   +M  L  +Y
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDMAALEKDY 432


>gi|17921989 tubulin, alpha 4a [Homo sapiens]
          Length = 448

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  N +  CDP HG Y+    +  G +  ++V+     I+ K S  F  
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TAI E   +  +  +F   +  +A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE--AWARLDHKFDLMYAKRA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNMNNLVSEY 316
           F+ WY G+GM + EF+E   +M  L  +Y
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDMAALEKDY 432


>gi|17986283 tubulin, alpha 1a [Homo sapiens]
          Length = 451

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  N +  CDP HG Y+    +  G +  ++V+     I+ K +  F  
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TAI E   +  +  +F   +  +A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE--AWARLDHKFDLMYAKRA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNMNNLVSEY 316
           F+ WY G+GM + EF+E   +M  L  +Y
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDMAALEKDY 432


>gi|156564363 tubulin, alpha 3d [Homo sapiens]
          Length = 450

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  N +  CDP HG Y+    +  G +  ++V+     I+ K +  F  
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TAI E   +  +  +F   +  +A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE--AWARLDHKFDLMYAKRA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNMNNLVSEY 316
           F+ WY G+GM + EF+E   ++  L  +Y
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDY 432


>gi|17921993 tubulin, alpha 3c [Homo sapiens]
          Length = 450

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  N +  CDP HG Y+    +  G +  ++V+     I+ K +  F  
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TAI E   +  +  +F   +  +A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE--AWARLDHKFDLMYAKRA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNMNNLVSEY 316
           F+ WY G+GM + EF+E   ++  L  +Y
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDY 432


>gi|14389309 tubulin alpha 6 [Homo sapiens]
          Length = 449

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  N +  CDP HG Y+    +  G +  ++V+     I+ K +  F  
Sbjct: 286 LTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TA+ E   +  +  +F   +  +A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAE--AWARLDHKFDLMYAKRA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNMNNLVSEY 316
           F+ WY G+GM + EF+E   +M  L  +Y
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDMAALEKDY 432


>gi|9507215 tubulin, alpha 8 [Homo sapiens]
          Length = 449

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  + +  CDP HG Y+    +  G +  ++V+     I+ K +  F  
Sbjct: 286 LSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TAI E   +  +  +F   +  +A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE--AWARLDHKFDLMYAKRA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNMNNLVSEY 316
           F+ WY G+GM + EF+E   ++  L  +Y
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDY 432


>gi|46409270 tubulin, alpha 3e [Homo sapiens]
          Length = 450

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 10/142 (7%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L V+++T   F+  N +  CDP HG Y+    +  G +  ++V+     I+ K +  F  
Sbjct: 286 LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

Query: 236 WIPHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKA 287
           W P   +      PP         +++ +V  +SN TAI E   +  ++ +F   +   A
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE--AWARLVHKFDLMYAKWA 403

Query: 288 FLSWYSGKGMHDVEFAEVESNM 309
           F+ WY G+GM + EF+E   ++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDL 425


>gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
          Length = 198

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
           L + KLT+Q+FDAKNM+AA  P     +   P       M+EV+EQ  ++QNK      H
Sbjct: 52  LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSRQQLFH 104

Query: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
            +  N  + +    P         +              +  QF A    KA L WY+G+
Sbjct: 105 GMDANNGQDSHVGHPSSWPQDGGHVRRQQRGHPE-ALHGLSGQFPAVLCGKAVLHWYAGE 163

Query: 296 GMHDVEFAEVESNMNNLVSEY 316
           GM+++EFAE E+NMN+ +SE+
Sbjct: 164 GMNEMEFAEAENNMNDFISEH 184


>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
          Length = 446

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 178 VSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWI 237
           VS +T   F++ N L  CDP  G Y+    +  G +  +EV+      ++++S  F  W 
Sbjct: 295 VSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWC 354

Query: 238 PHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFL 289
           P   +    + PP         ++  S+  +SN TAI E   +  +  +F   +  +AFL
Sbjct: 355 PTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVE--AWARLDHKFDLMYAKRAFL 412

Query: 290 SWYSGKGMHDVEFAEVESNMNNLVSEY 316
            WY  +GM + EF E   ++  L  +Y
Sbjct: 413 HWYLREGMEEAEFLEAREDLAALERDY 439


>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
          Length = 475

 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)

Query: 174 PPLEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQN-KYSSY 232
           PP  + ++    F   + L   DP H  YL  A +V G +   ++ +   NI+  K S  
Sbjct: 315 PPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV---QISDLRRNIERLKPSLQ 371

Query: 233 FAHWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWY 292
           F  W     + + C +PP+    S+  ++NNT ++  F    + E+F   ++ KA L  Y
Sbjct: 372 FVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFME--LKERFMRLYKKKAHLHHY 429

Query: 293 -SGKGMHDVEFAEVESNMNNLVSEY 316
              +GM +  F E  S+++ L+ EY
Sbjct: 430 LQVEGMEESCFTEAVSSLSALIQEY 454


>gi|7706751 tubulin, gamma 2 [Homo sapiens]
          Length = 451

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 178 VSKLTKQMFDAKNMLAACD---PCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFA 234
           V  + +++   KN++ +       + CY+    I+ G +   +V +    I+ +  + F 
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFI 349

Query: 235 HWIPHNVERA---ACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSW 291
            W P +++ A        P   ++S   ++N+T+I  LF   C  +QF    +  AFL  
Sbjct: 350 PWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSC--QQFDKLRKRDAFLEQ 407

Query: 292 YSGKGMHDVEFAEVESN---MNNLVSEY 316
           +  + M    F E++ +   +  L+ EY
Sbjct: 408 FRKEDMFKDNFDEMDRSREVVQELIDEY 435


>gi|31543831 tubulin, gamma 1 [Homo sapiens]
          Length = 451

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 11/148 (7%)

Query: 178 VSKLTKQMFDAKNMLAACD---PCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFA 234
           V  + +++   KN++ +       + CY+    I+ G +   +V +    I+ +  + F 
Sbjct: 290 VLDVMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFI 349

Query: 235 HWIPHNVERA---ACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSW 291
            W P +++ A        P   ++S   ++N+T+I  LF   C   Q+    + +AFL  
Sbjct: 350 PWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTC--RQYDKLRKREAFLEQ 407

Query: 292 YSGKGMHDVEFAEVESN---MNNLVSEY 316
           +  + M    F E++++   +  L+ EY
Sbjct: 408 FRKEDMFKDNFDEMDTSREIVQQLIDEY 435


>gi|169218027 PREDICTED: similar to tubulin, gamma 1 [Homo sapiens]
          Length = 158

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 201 CYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWIPHNVERA---ACDIPPLELKMSV 257
           CY+    I+ G +   +V +    I+ +  + F  W P +++ A        P   ++S 
Sbjct: 23  CYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSG 82

Query: 258 TFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGKGMHDVEFAEVESN---MNNLVS 314
             ++N+T+I  LF   C   Q+    + +AFL  +  + M    F E++++   +  L+ 
Sbjct: 83  LMMANHTSISSLFERTC--RQYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLID 140

Query: 315 EY 316
           EY
Sbjct: 141 EY 142


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,756,359
Number of Sequences: 37866
Number of extensions: 587828
Number of successful extensions: 1315
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1249
Number of HSP's gapped (non-prelim): 46
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.