SNX21 834

Name: SNX21	Sequence: fasta or formatted (152aa)		NCBI GI: 111118959
Description: sorting nexin 21 isoform c		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [158aa] sorting nexin 21 isoform d alt prot [373aa] sorting nexin 21 isoform a alt prot [199aa] sorting nexin 21 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 15 3 C cysteine 0.0 0 0 D aspartate 11.2 17 3 E glutamate 11.2 17 2 F phenylalanine 2.6 4 1 G glycine 8.6 13 1 H histidine 2.0 3 1 I isoleucine 0.0 0 0 K lysine 2.0 3 2 L leucine 10.5 16 2 M methionine 1.3 2 1 N asparagine 2.0 3 1 P proline 8.6 13 3 Q glutamine 5.3 8 1 R arginine 5.9 9 1 S serine 11.2 17 2 T threonine 4.6 7 1 V valine 2.0 3 2 W tryptophan 1.3 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 21 isoform c SNX21 0.968 sorting nexin 21 isoform d SNX21 0.954 sorting nexin 21 isoform a SNX21 0.954 sorting nexin 21 isoform b ZBTB45 0.070 zinc finger and BTB domain containing 45 CHIC1 0.060 cysteine-rich hydrophobic domain 1 C1orf107 0.056 digestive-organ expansion factor homolog LCP2 0.056 lymphocyte cytosolic protein 2 ITGAE 0.053 integrin, alpha E precursor LOC645490 0.053 PREDICTED: similar to hCG1991922 NCL 0.049 nucleolin LOC645490 0.049 PREDICTED: similar to hCG1991922 CASZ1 0.049 castor homolog 1, zinc finger isoform a PGBD3 0.049 hypothetical protein LOC267004 UBTF 0.049 upstream binding transcription factor, RNA polymera... UBTF 0.049 upstream binding transcription factor, RNA polymera... UBTF 0.049 upstream binding transcription factor, RNA polymerase... C10orf140 0.049 hypothetical protein LOC387640 SUPT5H 0.046 suppressor of Ty 5 homolog isoform a SUPT5H 0.046 suppressor of Ty 5 homolog isoform a SUPT5H 0.046 suppressor of Ty 5 homolog isoform a FAM134A 0.046 hypothetical protein LOC79137 NKX1-1 0.042 PREDICTED: NK1 homeobox 1 NKX1-1 0.042 PREDICTED: HPX-153 homeobox LOC645490 0.042 PREDICTED: similar to hCG1991922 MYT1 0.042 myelin transcription factor 1 PELP1 0.042 proline, glutamic acid and leucine rich protein 1 [... RP1L1 0.042 retinitis pigmentosa 1-like 1 ARID3A 0.039 AT rich interactive domain 3A (BRIGHT- like) protein ... SUPT5H 0.039 suppressor of Ty 5 homolog isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.