PGBD3 24166

Name: PGBD3	Sequence: fasta or formatted (593aa)		NCBI GI: 25777744
Description: hypothetical protein LOC267004		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 30 2 C cysteine 2.9 17 1 D aspartate 6.4 38 2 E glutamate 6.1 36 2 F phenylalanine 5.4 32 2 G glycine 5.9 35 2 H histidine 3.4 20 1 I isoleucine 4.9 29 2 K lysine 7.1 42 3 L leucine 7.6 45 2 M methionine 1.7 10 1 N asparagine 4.2 25 2 P proline 5.7 34 3 Q glutamine 3.9 23 2 R arginine 5.7 34 3 S serine 6.7 40 2 T threonine 5.4 32 2 V valine 7.3 43 2 W tryptophan 1.2 7 1 Y tyrosine 3.5 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC267004 PGBD2 0.368 hypothetical protein LOC267002 isoform a PGBD1 0.254 piggyBac transposable element derived 1 PGBD2 0.233 hypothetical protein LOC267002 isoform b PGBD4 0.075 piggyBac transposable element derived 4 PGBD5 0.027 piggyBac transposable element derived 5 SNX21 0.012 sorting nexin 21 isoform d SNX21 0.012 sorting nexin 21 isoform a SNX21 0.012 sorting nexin 21 isoform c SNX21 0.012 sorting nexin 21 isoform b AFF1 0.008 myeloid/lymphoid or mixed-lineage leukemia trithorax ... LOC100292376 0.006 PREDICTED: hypothetical protein LOC100290765 0.006 PREDICTED: hypothetical protein XP_002346483 LOC100287864 0.006 PREDICTED: hypothetical protein XP_002342323 DGKB 0.006 diacylglycerol kinase, beta isoform 2 DGKB 0.006 diacylglycerol kinase, beta isoform 1 TULP4 0.006 tubby like protein 4 isoform 2 TULP4 0.006 tubby like protein 4 isoform 1 MLXIP 0.006 MLX interacting protein EVL 0.006 Enah/Vasp-like C1orf116 0.006 specifically androgen-regulated protein isoform 1 [... TDRD6 0.005 tudor domain containing 6 TCEB3CL 0.005 transcription elongation factor B polypeptide 3C-li... TCEB3C 0.005 transcription elongation factor B polypeptide 3C [H... NCL 0.004 nucleolin ZNF414 0.004 zinc finger protein 414 isoform 1 ZNF414 0.004 zinc finger protein 414 isoform 2 AP3B2 0.004 adaptor-related protein complex 3, beta 2 subunit [H... PPP1R15A 0.004 protein phosphatase 1, regulatory subunit 15A [Homo... ZNF761 0.004 zinc finger protein 761 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.