SNX21 835

Name: SNX21	Sequence: fasta or formatted (158aa)		NCBI GI: 111118961
Description: sorting nexin 21 isoform d		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [152aa] sorting nexin 21 isoform c alt prot [373aa] sorting nexin 21 isoform a alt prot [199aa] sorting nexin 21 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 15 3 C cysteine 0.0 0 0 D aspartate 10.8 17 3 E glutamate 10.8 17 2 F phenylalanine 2.5 4 1 G glycine 8.2 13 1 H histidine 1.9 3 1 I isoleucine 0.0 0 0 K lysine 2.5 4 2 L leucine 10.8 17 2 M methionine 1.3 2 1 N asparagine 1.9 3 1 P proline 8.2 13 3 Q glutamine 5.1 8 1 R arginine 5.7 9 1 S serine 11.4 18 2 T threonine 5.1 8 1 V valine 2.5 4 2 W tryptophan 1.3 2 1 Y tyrosine 0.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 21 isoform d SNX21 0.939 sorting nexin 21 isoform a SNX21 0.939 sorting nexin 21 isoform b SNX21 0.932 sorting nexin 21 isoform c ZBTB45 0.068 zinc finger and BTB domain containing 45 CHIC1 0.057 cysteine-rich hydrophobic domain 1 C1orf107 0.054 digestive-organ expansion factor homolog ITGAE 0.051 integrin, alpha E precursor LOC645490 0.051 PREDICTED: similar to hCG1991922 NCL 0.047 nucleolin PGBD3 0.047 hypothetical protein LOC267004 LCP2 0.047 lymphocyte cytosolic protein 2 LOC645490 0.047 PREDICTED: similar to hCG1991922 CASZ1 0.047 castor homolog 1, zinc finger isoform a UBTF 0.047 upstream binding transcription factor, RNA polymera... UBTF 0.047 upstream binding transcription factor, RNA polymera... UBTF 0.047 upstream binding transcription factor, RNA polymerase... C10orf140 0.047 hypothetical protein LOC387640 SUPT5H 0.044 suppressor of Ty 5 homolog isoform a SUPT5H 0.044 suppressor of Ty 5 homolog isoform a SUPT5H 0.044 suppressor of Ty 5 homolog isoform a NKX1-1 0.041 PREDICTED: NK1 homeobox 1 NKX1-1 0.041 PREDICTED: HPX-153 homeobox LOC645490 0.041 PREDICTED: similar to hCG1991922 MYT1 0.041 myelin transcription factor 1 PELP1 0.041 proline, glutamic acid and leucine rich protein 1 [... RP1L1 0.041 retinitis pigmentosa 1-like 1 ARID3A 0.037 AT rich interactive domain 3A (BRIGHT- like) protein ... SUPT5H 0.037 suppressor of Ty 5 homolog isoform b SRCAP 0.037 Snf2-related CBP activator protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.