Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169170737
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169170737 PREDICTED: hypothetical protein LOC286002 [Homo
sapiens]
(159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169171936 PREDICTED: hypothetical protein LOC286002 [Homo sap... 325 1e-89
gi|169171203 PREDICTED: hypothetical protein LOC286002 [Homo sap... 325 1e-89
gi|169170737 PREDICTED: hypothetical protein LOC286002 [Homo sap... 325 1e-89
gi|239753856 PREDICTED: hypothetical protein [Homo sapiens] 40 6e-04
gi|239748415 PREDICTED: hypothetical protein [Homo sapiens] 40 6e-04
gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo ... 40 6e-04
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 40 0.001
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 39 0.002
gi|54860079 nadrin isoform 1 [Homo sapiens] 38 0.003
gi|54860105 nadrin isoform 2 [Homo sapiens] 38 0.003
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 38 0.003
gi|194272183 G protein-coupled receptor 124 [Homo sapiens] 37 0.005
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 37 0.005
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 37 0.007
gi|55741677 SET domain containing 1A [Homo sapiens] 37 0.009
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 36 0.012
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 36 0.016
gi|239582763 ral guanine nucleotide dissociation stimulator-like... 36 0.016
gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 35 0.021
gi|9945318 MAX binding protein [Homo sapiens] 35 0.021
gi|17511255 poly(A) binding protein interacting protein 1 isofor... 35 0.021
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.027
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 35 0.027
gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 35 0.027
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 35 0.027
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 35 0.027
gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens] 35 0.027
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] 35 0.027
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 35 0.027
>gi|169171936 PREDICTED: hypothetical protein LOC286002 [Homo
sapiens]
Length = 159
Score = 325 bits (833), Expect = 1e-89
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH 60
MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH
Sbjct: 1 MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH 60
Query: 61 SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP 120
SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP
Sbjct: 61 SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP 120
Query: 121 RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE 159
RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE
Sbjct: 121 RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE 159
>gi|169171203 PREDICTED: hypothetical protein LOC286002 [Homo
sapiens]
Length = 159
Score = 325 bits (833), Expect = 1e-89
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH 60
MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH
Sbjct: 1 MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH 60
Query: 61 SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP 120
SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP
Sbjct: 61 SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP 120
Query: 121 RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE 159
RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE
Sbjct: 121 RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE 159
>gi|169170737 PREDICTED: hypothetical protein LOC286002 [Homo
sapiens]
Length = 159
Score = 325 bits (833), Expect = 1e-89
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH 60
MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH
Sbjct: 1 MENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPH 60
Query: 61 SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP 120
SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP
Sbjct: 61 SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLLLESELAVDRP 120
Query: 121 RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE 159
RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE
Sbjct: 121 RHHVAAAVLGELRRLRPAAWRCHDLRARGQRGGRTRGKE 159
>gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 40.4 bits (93), Expect = 6e-04
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
Query: 51 RPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALP 97
RPGA PPAP S P P PP G+ +P PLP A GQ +P
Sbjct: 129 RPGAEPPAPASDPDLEPTPPGGLKSP----------PLPCASGQGVP 165
>gi|239748415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 40.4 bits (93), Expect = 6e-04
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
Query: 51 RPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALP 97
RPGA PPAP S P P PP G+ +P PLP A GQ +P
Sbjct: 129 RPGAEPPAPASDPDLEPTPPGGLKSP----------PLPCASGQGVP 165
>gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo
sapiens]
Length = 208
Score = 40.4 bits (93), Expect = 6e-04
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
Query: 51 RPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALP 97
RPGA PPAP S P P PP G+ +P PLP A GQ +P
Sbjct: 129 RPGAEPPAPASDPDLEPTPPGGLKSP----------PLPCASGQGVP 165
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 40.0 bits (92), Expect = 8e-04
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 6 ASISENKLTGGSSGGKNLTDGATLPPEGR-RGGPETESRAS-GRSSWRPGAPPPAPHSRP 63
A+ + + G GG + LPP + RG P + S G RP +PPP+P S P
Sbjct: 73 AAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPSPPSPP 132
Query: 64 LGT-------PFPPQGVDAPLRFSLRRP 84
+ T P+PPQG +P SLR P
Sbjct: 133 VPTAQSSLPAPWPPQGPRSPAP-SLRAP 159
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 39.7 bits (91), Expect = 0.001
Identities = 33/87 (37%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 18 SGGKNLTDGATLPP-EGRRGGPETESRASGRSSWR-PGAPPPAPHSRPLGTPFPPQGVDA 75
SG ++ LPP G G P+ R SS R P PPP P P PPQ
Sbjct: 581 SGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLP-------PTPPQPAR- 632
Query: 76 PLRFSLRRPARPLPAALGQALPQRLAL 102
R S R PA P PA+ G A P ++L
Sbjct: 633 --RQSRRSPASPSPASPGPASPSPVSL 657
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 38.5 bits (88), Expect = 0.002
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 35 RGGPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQ 94
R GP++ + A+ APP P R GTP + + R ARPLP LG+
Sbjct: 456 RSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAAR-----AARPLPLFLGR 510
Query: 95 ALPQRLALLQAP 106
A P R A+ Q P
Sbjct: 511 APPPRPAVEQPP 522
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 14/107 (13%)
Query: 30 PPEGRRGGPETESRASGRSSWRPGAP-----PPAPHS-RPLGTPFPPQGVDAPLRFS--- 80
PP G GG + + S P P PP H+ +P G P P + AP R+S
Sbjct: 646 PPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSL 705
Query: 81 --LRRPARPLPAALGQALPQRLALLQA---PLVLLLESELAVDRPRH 122
++ P P P QA P + P + L SE +++P H
Sbjct: 706 SPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSH 752
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 14/107 (13%)
Query: 30 PPEGRRGGPETESRASGRSSWRPGAP-----PPAPHS-RPLGTPFPPQGVDAPLRFS--- 80
PP G GG + + S P P PP H+ +P G P P + AP R+S
Sbjct: 568 PPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSL 627
Query: 81 --LRRPARPLPAALGQALPQRLALLQA---PLVLLLESELAVDRPRH 122
++ P P P QA P + P + L SE +++P H
Sbjct: 628 SPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSH 674
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 38.1 bits (87), Expect = 0.003
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 30 PPEGRRGGP----ETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPA 85
PP G+ GP + +SR+S +P PPP ++P G P PP P +P
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 213
Query: 86 RPLPAALGQALP 97
P P Q P
Sbjct: 214 GPPPPGKPQGPP 225
Score = 38.1 bits (87), Expect = 0.003
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 30 PPEGRRGGPETESRASGRSS----WRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPA 85
PP G+ GP + + RSS +P PPP ++P G P PP P +P
Sbjct: 278 PPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 337
Query: 86 RPLPAALGQALP 97
P P Q P
Sbjct: 338 GPPPPGKPQGPP 349
Score = 35.4 bits (80), Expect = 0.021
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 30 PPEGRRGGPETE---SRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
PP G+ GP + SR+ +P PPP ++P G P PP P +P
Sbjct: 93 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 152
Query: 87 PLPAALGQALP 97
P P Q P
Sbjct: 153 PPPPGKPQGPP 163
Score = 35.4 bits (80), Expect = 0.021
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 30 PPEGRRGGP----ETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPA 85
PP G+ GP + +S+++ +P PPP ++P G P PP P +P
Sbjct: 216 PPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 275
Query: 86 RPLPAALGQALP 97
P P Q P
Sbjct: 276 GPPPPGKPQGPP 287
Score = 32.3 bits (72), Expect = 0.18
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 35/84 (41%)
Query: 30 PPEGRRGGPETESRASGRSSWRP----------------GAPPPA----------PHSRP 63
PP G+ GP + + RS+ P G PPPA P +P
Sbjct: 340 PPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQP 399
Query: 64 LGTPFPPQGVDAPLRFSLRRPARP 87
G P PPQG RP+RP
Sbjct: 400 QGPPRPPQG---------GRPSRP 414
Score = 28.9 bits (63), Expect = 1.9
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 2 ENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPE---TESRASGRSSWRPGAPPPA 58
+ ++ S+ G G N G PP +G P + + +P PPP
Sbjct: 25 QEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 84
Query: 59 PHSRPLGTPFP--PQG 72
++P G P P PQG
Sbjct: 85 GGNKPQGPPPPGKPQG 100
Score = 28.5 bits (62), Expect = 2.5
Identities = 15/47 (31%), Positives = 19/47 (40%)
Query: 51 RPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALP 97
+P PPP ++P G P PP P +P P P Q P
Sbjct: 56 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 102
Score = 26.9 bits (58), Expect = 7.4
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 30 PPEGRRGGPETESRASGRSSWRPG---APPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
PP G+ GP + + PG PPP S+ PP P + P
Sbjct: 320 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQG 379
Query: 87 PLPAALG 93
P P A G
Sbjct: 380 PPPPAGG 386
>gi|194272183 G protein-coupled receptor 124 [Homo sapiens]
Length = 1338
Score = 37.4 bits (85), Expect = 0.005
Identities = 40/129 (31%), Positives = 47/129 (36%), Gaps = 16/129 (12%)
Query: 43 RASGRSSWR---PGAPPPAPHSRPLGTPF------PPQGVDAPLRFSLRRPARPLPAALG 93
R R+SWR P A P APH+ P P P G P S + P ALG
Sbjct: 1073 RRDVRASWRACCPPASPAAPHAPPRALPAAAEDGSPVFGEGPPSLKSSPSGSSGHPLALG 1132
Query: 94 QALPQRLALLQAPLVLLLESELAVDRPRHHVAAAVLGELRRLRPA----AWRCHDLRARG 149
P +L LQ + E+ A A G L P R H RA+G
Sbjct: 1133 ---PCKLTNLQLAQSQVCEAGAAAGGEGEPEPAGTRGNLAHRHPNNVHHGRRAHKSRAKG 1189
Query: 150 QRGGRTRGK 158
R G GK
Sbjct: 1190 HRAGEACGK 1198
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 37.4 bits (85), Expect = 0.005
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 30 PPEGRRGGPETE---SRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
PP G+ GP + SR+S +P PPP ++P G P PP P +P
Sbjct: 194 PPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 253
Query: 87 PLPAALGQALP 97
P P Q P
Sbjct: 254 PPPPGKPQGPP 264
Score = 36.6 bits (83), Expect = 0.009
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 30 PPEGRRGGPETE---SRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
PP G+ GP + SR+ +P PPP ++P G P PP P RP
Sbjct: 72 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQG 131
Query: 87 PLPAALGQALP 97
P P Q P
Sbjct: 132 PPPPGKPQGPP 142
Score = 36.2 bits (82), Expect = 0.012
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 30 PPEGRRGGPETE---SRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
PP G+ GP + SR+ +P PPP ++P G P PP P ++P
Sbjct: 133 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQG 192
Query: 87 PLPAALGQALP 97
P P Q P
Sbjct: 193 PPPPGKPQGPP 203
Score = 31.6 bits (70), Expect = 0.30
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 25/86 (29%)
Query: 12 KLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPA----------PHS 61
K G + G + + A PP +G P+ E G PPPA P
Sbjct: 259 KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNP------QGPPPPAGGNPQQPQAPPAG 312
Query: 62 RPLGTPFPPQGVDAPLRFSLRRPARP 87
+P G P PPQG RP+RP
Sbjct: 313 QPQGPPRPPQG---------GRPSRP 329
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 37.0 bits (84), Expect = 0.007
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 52 PGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLP 89
PG PPP P PLG PP G AP+ +L++ + P P
Sbjct: 571 PGGPPPPPGPPPLGAIMPPPG--APMGLALKKKSIPQP 606
Score = 28.5 bits (62), Expect = 2.5
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 8/76 (10%)
Query: 30 PPEGRRGGPETESRASGRSSWRPGAP------PPAPHSRPLGTPFPPQGVDAPLRFSLRR 83
P G GGP S P P PP P P G P PP G PL +
Sbjct: 531 PSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPG-PPPLGAIMPP 589
Query: 84 PARPLPAAL-GQALPQ 98
P P+ AL +++PQ
Sbjct: 590 PGAPMGLALKKKSIPQ 605
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 36.6 bits (83), Expect = 0.009
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 31 PEGRRGGPETESRASGRSSWRPGAPPP-APHSRPLGTPFPPQGVDAPLRFSLRRPARPLP 89
PE G P T S RP P +P S PL P PP G AP RP+ P+P
Sbjct: 1097 PERVAGSPVTPLPEQEASPARPAGPTEESPPSAPLRPPEPPAGPPAPAPRPDERPSSPIP 1156
Score = 31.2 bits (69), Expect = 0.39
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 2 ENDAASISENKLTGGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPP---- 57
END+ S SE+ + SS + + ++ E E ++ +PPP
Sbjct: 1026 ENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPREVP 1085
Query: 58 APHSRPLGTPFPPQGVDA---PLRFSLRRPARP 87
P P+ P P + + PL PARP
Sbjct: 1086 VPTPAPVEVPVPERVAGSPVTPLPEQEASPARP 1118
Score = 26.6 bits (57), Expect = 9.6
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Query: 51 RPGAPPPA-------PHSRPLGTPFPPQGVDAPLRFSLRRPARPLP 89
R G+PPPA P P P PP PL + +PA LP
Sbjct: 590 RGGSPPPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLP 635
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 36.2 bits (82), Expect = 0.012
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 15 GGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVD 74
GG +G + G G R GP R RS P P RP G P PP
Sbjct: 1402 GGKAGSSGSSSGGGGGGPGGRTGP---GRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPS 1458
Query: 75 APLRFSLRRPARPLPAALGQALPQ 98
+ F L + PA + QAL Q
Sbjct: 1459 SSAVFRLDQVIHSNPAGIQQALAQ 1482
Score = 34.7 bits (78), Expect = 0.035
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 52 PGAPPPAPHSR---PLGTPFPPQGV-----DAPLRFSLRRPARPLPAALGQA 95
P APPPAP P+G P + AP L PARP PA+LG+A
Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRA 2048
Score = 29.6 bits (65), Expect = 1.1
Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 16/95 (16%)
Query: 12 KLTGGSSGGK---NLTDGATLPPEGRRG-------GPETESRASGRSSWRPGAPPPAPHS 61
+LTG +G K + G PP RR GP S G PGAPP +
Sbjct: 892 QLTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPP--RRA 949
Query: 62 RPLGTPFPPQGVD----APLRFSLRRPARPLPAAL 92
P+ P PP V+ PL P P P L
Sbjct: 950 GPIKKPPPPTKVEELPPKPLEQGDETPKPPKPDPL 984
Score = 27.3 bits (59), Expect = 5.6
Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 13/73 (17%)
Query: 25 DGATLPPEGRRG--------GPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAP 76
DG EG G G E A G+ P + PP P + T PP+ P
Sbjct: 346 DGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGP 405
Query: 77 LRFSLRRPARPLP 89
P PLP
Sbjct: 406 -----PAPKPPLP 413
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 35.8 bits (81), Expect = 0.016
Identities = 30/81 (37%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
Query: 14 TGGSSGGKN-LTDGATLPPEGRRGGPETESRASGRSSWRP------GAPPPAPHSRPLGT 66
TGG KN L A PP RGGP S P GAPPP P P
Sbjct: 262 TGGVEAVKNELRRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAA 321
Query: 67 PFPPQGVDAPLRFSLRRPARP 87
P PP P R S+ P P
Sbjct: 322 PPPP----PPSRPSVAVPPPP 338
>gi|239582763 ral guanine nucleotide dissociation stimulator-like 3
isoform 2 [Homo sapiens]
Length = 710
Score = 35.8 bits (81), Expect = 0.016
Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 31 PEGRRGGPETESRASGRSSWRPGAPPPAPHSR--PLGTPFP---PQGVDAPLRFSLRRPA 85
P G G P +S SS PG+PP +P SR P G+P PQG L SL P+
Sbjct: 537 PSGSPGDP-----SSPTSSVSPGSPPSSPRSRDAPAGSPPASPGPQGPSTKLPLSLDLPS 591
Query: 86 RPLPAALGQALPQ 98
P P AL P+
Sbjct: 592 -PRPFALPLGSPR 603
>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
Length = 435
Score = 35.4 bits (80), Expect = 0.021
Identities = 34/124 (27%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 31 PEGRRG-GPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLP 89
PEG + GP + + PP P L P P P R LR P+ P+
Sbjct: 124 PEGTQAAGPAPAGKEHRKQDAETPPPPDPPAPETLLAPPPLPSTPDPPRRELRAPSPPVE 183
Query: 90 AALGQALPQRLALLQAPLVLLLESELAVDRPRHHVAAAVLGELRRLRPAAWRCHDLRARG 149
P+ L + PLV+ ++ +R + A + R RP WR ARG
Sbjct: 184 H------PRLLRSVPTPLVM---AQKISERMAGNEALSPTSPFREGRPGEWRTP--AARG 232
Query: 150 QRGG 153
R G
Sbjct: 233 PRSG 236
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 35.4 bits (80), Expect = 0.021
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 52 PGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLP--AALGQAL---PQRLALLQAP 106
P APPPAP PL TP P + P+ + +P P P A Q L P++ AL+ AP
Sbjct: 69 PPAPPPAPPP-PLATPAPLTVIPIPVVTNSPQPLPPPPPLPAAAQPLPLAPRQPALVGAP 127
Query: 107 LVLLLESELAVDRPRHHVAAAVLGELRRLRP 137
+ + E RP+ A +L + + P
Sbjct: 128 GLSIKEPAPLPSRPQVPTPAPLLPDSKATIP 158
Score = 28.9 bits (63), Expect = 1.9
Identities = 31/116 (26%), Positives = 39/116 (33%), Gaps = 14/116 (12%)
Query: 2 ENDAASISENKLTGGSSGGKNLTD-------GATLPPEGRRGGPETESRASGRSSWRPGA 54
E+D AS S S G N+ + G P R PE S P
Sbjct: 323 EDDQASTST-----ASEGEDNIDEDMEEDRAGLGPPKLSHRPQPELLKSTLPPPSTTPAP 377
Query: 55 PPPAPHSRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLL 110
PP PH P PP P++ + PLPA L+ AP L+
Sbjct: 378 LPPHPHPHPHSVALPP--AHLPVQQQQPQQKTPLPAPPPPPAAPAQTLVPAPAHLV 431
>gi|17511255 poly(A) binding protein interacting protein 1 isoform 1
[Homo sapiens]
Length = 479
Score = 35.4 bits (80), Expect = 0.021
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 22/123 (17%)
Query: 15 GGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVD 74
GG G +GA GP +R PG P P +P T PP G
Sbjct: 23 GGGPEGGGFPNGA---------GPAERARHQPPQPKAPGFLQPPPLRQPRTT--PPPGAQ 71
Query: 75 APLRFSLRRPARPLPAALGQALPQRLALLQAP-----LVLLLESELAVDRPRHHVAAAVL 129
+ S +RP+RP ALP++ L+AP + SE A+ +P+ VA ++
Sbjct: 72 CEVPASPQRPSRP------GALPEQTRPLRAPPSSQDKIPQQNSESAMAKPQVVVAPVLM 125
Query: 130 GEL 132
+L
Sbjct: 126 SKL 128
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 35.0 bits (79), Expect = 0.027
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 27 ATLPPEGRRGGPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
AT P R G +++S+A R+ P APP P + PL P PP AP
Sbjct: 368 ATAPASPRLG--QSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAP---------- 415
Query: 87 PLPAALGQALP 97
PLP A A P
Sbjct: 416 PLPCAQKAAHP 426
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 35.0 bits (79), Expect = 0.027
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 27 ATLPPEGRRGGPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
AT P R G +++S+A R+ P APP P + PL P PP AP
Sbjct: 368 ATAPASPRLG--QSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAP---------- 415
Query: 87 PLPAALGQALP 97
PLP A A P
Sbjct: 416 PLPCAQKAAHP 426
>gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
sapiens]
Length = 319
Score = 35.0 bits (79), Expect = 0.027
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 27 ATLPPEGRRGGPETES---------RASGRSSWRPGAPPPAPHSRPLGTP---FPPQGVD 74
A PP G R GPE +A G R PP P ++P +P + G
Sbjct: 204 AEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRG 263
Query: 75 APLRF--SLRRPARPLPAALGQALPQ 98
PLR L+RP PLP +G A P+
Sbjct: 264 DPLRVPRCLQRPLSPLP-HVGDAPPR 288
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 35.0 bits (79), Expect = 0.027
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 27 ATLPPEGRRGGPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLRRPAR 86
AT P R G +++S+A R+ P APP P + PL P PP AP
Sbjct: 368 ATAPASPRLG--QSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAP---------- 415
Query: 87 PLPAALGQALP 97
PLP A A P
Sbjct: 416 PLPCAQKAAHP 426
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 35.0 bits (79), Expect = 0.027
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 26 GATLPPEGRRGGPETESRASGRSSWRPGAPPPAPHSRPLGTPFPPQGVDAPLRFSLR--- 82
GA L + P T RA+ + +RPG+P P HSR P P R LR
Sbjct: 184 GARLRLSSQLPSPTTLPRAAPLTPYRPGSPSPRGHSRLRSRP--------PTRAQLRVGA 235
Query: 83 RPARPLPAAL 92
P P+PA L
Sbjct: 236 NPLSPVPARL 245
>gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]
Length = 757
Score = 35.0 bits (79), Expect = 0.027
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 52 PGAPPPAPH-SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLL 110
PG P P S PL P P D+P + L + A P P+ L L ++ +LL L+
Sbjct: 89 PGIPDTLPPGSAPLEAPMTPVTDDSPQKKMLGQKATPPPSPLLSELLKKGSLLPTSPRLV 148
Query: 111 LESELAV 117
ESE+AV
Sbjct: 149 NESEMAV 155
>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
Length = 951
Score = 35.0 bits (79), Expect = 0.027
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 52 PGAPPPAPH-SRPLGTPFPPQGVDAPLRFSLRRPARPLPAALGQALPQRLALLQAPLVLL 110
PG P P S PL P P D+P + L + A P P+ L L ++ +LL L+
Sbjct: 229 PGIPDTLPPGSAPLEAPMTPVTDDSPQKKMLGQKATPPPSPLLSELLKKGSLLPTSPRLV 288
Query: 111 LESELAV 117
ESE+AV
Sbjct: 289 NESEMAV 295
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 0.027
Identities = 42/130 (32%), Positives = 49/130 (37%), Gaps = 33/130 (25%)
Query: 15 GGSSGGKNLTDGATLPPEGRRGGPETESRASGRSSWRPGAPPPAPHS-----RPLGTP-- 67
GG GG + G +L + R G P SGRS RPG PP+ S LG+
Sbjct: 98 GGGGGGSARSSGISLGYDQRHGSPR-----SGRSDPRPGPGPPSVGSARSSVSSLGSRGS 152
Query: 68 -------FPPQGVDAPLR---------FSLRRPARPLPAAL---GQALPQRLALLQAPLV 108
PP AP R F L PA PLP A +RL L L
Sbjct: 153 AGAYADFLPPGACPAPARSPEPAGPAPFPL--PALPLPPGREGGPSAAERRLEALTRELE 210
Query: 109 LLLESELAVD 118
LE+ A D
Sbjct: 211 RALEARTARD 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,299,498
Number of Sequences: 37866
Number of extensions: 546808
Number of successful extensions: 5949
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 619
Number of HSP's that attempted gapping in prelim test: 4537
Number of HSP's gapped (non-prelim): 1791
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.