LOC100134674 7848

Name: LOC100134674	Sequence: fasta or formatted (310aa)		NCBI GI: 169170721
Description: PREDICTED: similar to intestinal mucin		Referenced in: Mucins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 19 2 C cysteine 3.5 11 1 D aspartate 6.8 21 2 E glutamate 7.1 22 2 F phenylalanine 4.8 15 1 G glycine 6.8 21 2 H histidine 1.6 5 1 I isoleucine 2.3 7 1 K lysine 4.2 13 1 L leucine 8.1 25 4 M methionine 2.3 7 1 N asparagine 4.5 14 3 P proline 3.2 10 1 Q glutamine 5.2 16 2 R arginine 5.2 16 2 S serine 7.1 22 3 T threonine 7.7 24 2 V valine 8.7 27 2 W tryptophan 2.9 9 2 Y tyrosine 1.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to intestinal mucin MUC3B 0.986 PREDICTED: mucin 3B, cell surface associated, parti... MUC3A 0.986 PREDICTED: mucin 3A, intestinal LOC100134216 0.781 PREDICTED: similar to hCG1747328, partial MUC12 0.200 PREDICTED: mucin 12 MUC12 0.200 PREDICTED: mucin 12 MUC17 0.192 mucin 17 MUC12 0.174 PREDICTED: mucin 12 MUC12 0.169 PREDICTED: mucin 12, cell surface associated IMPG2 0.032 interphotoreceptor matrix proteoglycan 2 GPR116 0.027 G-protein coupled receptor 116 GPR116 0.027 G-protein coupled receptor 116 CSPG5 0.024 chondroitin sulfate proteoglycan 5 (neuroglycan C) ... GPR110 0.023 G-protein coupled receptor 110 isoform 1 MUC4 0.023 mucin 4 isoform a MUC4 0.023 mucin 4 isoform e MUC4 0.023 mucin 4 isoform d LRP2 0.016 low density lipoprotein-related protein 2 MEP1A 0.013 meprin A alpha IMPG1 0.013 interphotoreceptor matrix proteoglycan 1 MEP1B 0.013 meprin A beta UMODL1 0.011 uromodulin-like 1 isoform 1 precursor UMODL1 0.011 uromodulin-like 1 isoform 2 precursor MUC16 0.011 mucin 16 PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... SCN1A 0.008 sodium channel, voltage-gated, type I, alpha SLIT3 0.008 slit homolog 3 LRP1 0.008 low density lipoprotein-related protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.