Guide to the Human Genome
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Name: GPR116 Sequence: fasta or formatted (1346aa) NCBI GI: 148719671
Description:

G-protein coupled receptor 116

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [1346aa] G-protein coupled receptor 116
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         65           2
 C cysteine            3.3         44           2
 D aspartate           3.5         47           1
 E glutamate           5.2         70           2
 F phenylalanine       4.6         62           2
 G glycine             5.1         69           2
 H histidine           2.0         27           2
 I isoleucine          7.3         98           2
 K lysine              5.1         68           3
 L leucine             8.9        120           2
 M methionine          1.9         26           2
 N asparagine          6.1         82           2
 P proline             4.5         61           2
 Q glutamine           3.6         48           3
 R arginine            2.8         38           2
 S serine             11.1        150           3
 T threonine           7.6        102           3
 V valine              7.7        103           3
 W tryptophan          1.8         24           1
 Y tyrosine            3.1         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G-protein coupled receptor 116 
GPR116                1.000   G-protein coupled receptor 116 
GPR110                0.141   G-protein coupled receptor 110 isoform 1 
GPR111                0.126   G-protein coupled receptor 111 
GPR115                0.121   G-protein coupled receptor 115 
GPR113                0.095   G-protein coupled receptor 113 isoform 1 
GPR113                0.095   G-protein coupled receptor 113 isoform 2 
GPR113                0.093   G-protein coupled receptor 113 isoform 3 
GPR133                0.052   G protein-coupled receptor 133 
LPHN2                 0.047   latrophilin 2 precursor 
LPHN3                 0.046   latrophilin 3 precursor 
ELTD1                 0.046   EGF, latrophilin and seven transmembrane domain con...
GPR126                0.045   G protein-coupled receptor 126 alpha 1 precursor [Ho...
GPR126                0.045   G protein-coupled receptor 126 beta 1 precursor [Hom...
GPR126                0.045   G protein-coupled receptor 126 alpha 2 precursor [Ho...
GPR126                0.045   G protein-coupled receptor 126 beta 2 precursor [Hom...
GPR64                 0.043   G protein-coupled receptor 64 isoform 3 
GPR64                 0.043   G protein-coupled receptor 64 isoform 2 
GPR64                 0.043   G protein-coupled receptor 64 isoform 1 
GPR64                 0.043   G protein-coupled receptor 64 isoform 4 
LPHN1                 0.041   latrophilin 1 isoform 1 precursor 
LPHN1                 0.041   latrophilin 1 isoform 2 precursor 
BAI2                  0.041   brain-specific angiogenesis inhibitor 2 
GPR112                0.041   G-protein coupled receptor 112 
BAI1                  0.040   brain-specific angiogenesis inhibitor 1 precursor [...
CD97                  0.038   CD97 antigen isoform 3 precursor 
CD97                  0.038   CD97 antigen isoform 2 precursor 
CD97                  0.038   CD97 antigen isoform 1 precursor 
CELSR1                0.037   cadherin EGF LAG seven-pass G-type receptor 1 
BAI3                  0.037   brain-specific angiogenesis inhibitor 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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