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Search of human proteins with 169168160
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169168160 PREDICTED: hypothetical protein [Homo sapiens]
(148 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169168451 PREDICTED: hypothetical protein [Homo sapiens] 312 6e-86
gi|169168160 PREDICTED: hypothetical protein [Homo sapiens] 312 6e-86
gi|169167373 PREDICTED: hypothetical protein [Homo sapiens] 312 6e-86
gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo ... 40 7e-04
gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo ... 40 7e-04
gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens] 39 0.002
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.002
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens] 39 0.002
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.002
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.002
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 38 0.004
gi|188536004 zinc finger protein 469 [Homo sapiens] 37 0.005
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 37 0.006
gi|13540521 basic helix-loop-helix domain containing, class B, 3... 37 0.006
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 36 0.013
gi|34452695 amiloride-sensitive cation channel 1, neuronal isofo... 36 0.013
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 36 0.013
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 35 0.018
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] 35 0.018
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 35 0.023
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 35 0.023
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ... 35 0.030
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ... 35 0.030
gi|239508959 PREDICTED: hypothetical protein [Homo sapiens] 35 0.030
gi|54607124 RNA binding motif protein 15B [Homo sapiens] 34 0.039
gi|23510368 homeobox D11 [Homo sapiens] 34 0.051
gi|169204510 PREDICTED: hypothetical protein [Homo sapiens] 34 0.051
gi|169205117 PREDICTED: hypothetical protein [Homo sapiens] 34 0.051
gi|71274152 hypothetical protein LOC388939 [Homo sapiens] 34 0.051
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 33 0.067
>gi|169168451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 312 bits (800), Expect = 6e-86
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR 60
MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR
Sbjct: 1 MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR 60
Query: 61 PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC 120
PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC
Sbjct: 61 PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC 120
Query: 121 PSPSCTAATLRPASFSQPGSAHTCSSAL 148
PSPSCTAATLRPASFSQPGSAHTCSSAL
Sbjct: 121 PSPSCTAATLRPASFSQPGSAHTCSSAL 148
>gi|169168160 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 312 bits (800), Expect = 6e-86
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR 60
MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR
Sbjct: 1 MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR 60
Query: 61 PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC 120
PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC
Sbjct: 61 PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC 120
Query: 121 PSPSCTAATLRPASFSQPGSAHTCSSAL 148
PSPSCTAATLRPASFSQPGSAHTCSSAL
Sbjct: 121 PSPSCTAATLRPASFSQPGSAHTCSSAL 148
>gi|169167373 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 312 bits (800), Expect = 6e-86
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR 60
MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR
Sbjct: 1 MNETKPSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR 60
Query: 61 PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC 120
PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC
Sbjct: 61 PLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFC 120
Query: 121 PSPSCTAATLRPASFSQPGSAHTCSSAL 148
PSPSCTAATLRPASFSQPGSAHTCSSAL
Sbjct: 121 PSPSCTAATLRPASFSQPGSAHTCSSAL 148
>gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo
sapiens]
Length = 194
Score = 40.0 bits (92), Expect = 7e-04
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 42 GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100
G GG L+ + + GRP G G G T + PP L+ P P P+ PR PA A
Sbjct: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
Query: 101 CFFPRGSTCRALPLL-----ASLFCP 121
P S+C+A ASL CP
Sbjct: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
>gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo
sapiens]
Length = 194
Score = 40.0 bits (92), Expect = 7e-04
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 42 GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100
G GG L+ + + GRP G G G T + PP L+ P P P+ PR PA A
Sbjct: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
Query: 101 CFFPRGSTCRALPLL-----ASLFCP 121
P S+C+A ASL CP
Sbjct: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
>gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]
Length = 587
Score = 38.9 bits (89), Expect = 0.002
Identities = 46/170 (27%), Positives = 60/170 (35%), Gaps = 38/170 (22%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG---------GGGGSPFLRNQVKQA 56
P STTA + H+ PG+ D + G GSP R + A
Sbjct: 225 PGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP--RTTLSPA 282
Query: 57 VAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRG 106
+ P G +G+ Q P PS PPST A +P +T FP
Sbjct: 283 SSTSP--GLQGESTAFQTHPASTHTTPS--PPSTATAPVEESTTYHRSPGSTPTTHFPAS 338
Query: 107 STCRALPLLASLFCPSPSCTAATLRPA-------------SFSQPGSAHT 143
ST +++F SP + T A S SQPGS HT
Sbjct: 339 STTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGVSEESSTSHSQPGSTHT 388
Score = 30.8 bits (68), Expect = 0.43
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSSA 147
+T + P +TH FP +T L ++ SP T TL PAS + G + +++
Sbjct: 154 TTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 212
Score = 29.3 bits (64), Expect = 1.3
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 14/134 (10%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGG 65
P+STT++ S H+ PG+ + D G S +
Sbjct: 141 PASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHS-------------S 187
Query: 66 RGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSC 125
G T +P PSQ +T ++P +T P +T + ++ F SP
Sbjct: 188 PGSTDTTLLPASTTTSGPSQ-ESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGS 246
Query: 126 TAATLRPASFSQPG 139
T TL P S + G
Sbjct: 247 THTTLFPDSTTSSG 260
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 73 QVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRP 132
Q PP L P P QAPPS P + P + A P+ A+ LL + F P PS
Sbjct: 395 QAPPALALP-PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV----Q 449
Query: 133 ASFSQPGSAHTCSSA 147
A FS P S SA
Sbjct: 450 APFSPPASPPVSPSA 464
Score = 33.1 bits (74), Expect = 0.087
Identities = 43/147 (29%), Positives = 53/147 (36%), Gaps = 15/147 (10%)
Query: 9 TTATQSSRPRKREHTGPGAFRKASRQ---DPRPAWGGGGGSPFLRNQVKQ-AVAGRPLGG 64
+T S R+R G G R ASR P P R + A +P
Sbjct: 216 STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP--- 272
Query: 65 GRGQGCTAQVPPLLQRPRPSQAP-----PSTPRANPPATHACFFPRGSTCRALPLLASLF 119
+ +G A PP + PR AP S+P A P + A T A P +SL
Sbjct: 273 -KPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLT 331
Query: 120 CPSPSCTAATLRPASFSQPGSAHTCSS 146
C T L P S S P S T S
Sbjct: 332 C--QLATPLPLAPPSPSAPPSLQTLPS 356
Score = 29.3 bits (64), Expect = 1.3
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 17/81 (20%)
Query: 75 PPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCP--------SPSCT 126
PPL P P +PP +P A PP P+ A P L P +P
Sbjct: 477 PPLQVPPSPPASPPMSPSATPP-------PQAPPPLAAPPLQLAKPPPQAPPALATPPLQ 529
Query: 127 AATLRPASFSQPGSAHTCSSA 147
A PASF PG A SA
Sbjct: 530 ALPSPPASF--PGQAPFSPSA 548
>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
Length = 456
Score = 38.9 bits (89), Expect = 0.002
Identities = 46/170 (27%), Positives = 60/170 (35%), Gaps = 38/170 (22%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG---------GGGGSPFLRNQVKQA 56
P STTA + H+ PG+ D + G GSP R + A
Sbjct: 119 PGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP--RTTLSPA 176
Query: 57 VAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRG 106
+ P G +G+ Q P PS PPST A +P +T FP
Sbjct: 177 SSTSP--GLQGESTAFQTHPASTHTTPS--PPSTATAPVEESTTYHRSPGSTPTTHFPAS 232
Query: 107 STCRALPLLASLFCPSPSCTAATLRPA-------------SFSQPGSAHT 143
ST +++F SP + T A S SQPGS HT
Sbjct: 233 STTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGVSEESSTSHSQPGSTHT 282
Score = 30.8 bits (68), Expect = 0.43
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSSA 147
+T + P +TH FP +T L ++ SP T TL PAS + G + +++
Sbjct: 48 TTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 106
Score = 29.3 bits (64), Expect = 1.3
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 14/134 (10%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGG 65
P+STT++ S H+ PG+ + D G S +
Sbjct: 35 PASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHS-------------S 81
Query: 66 RGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSC 125
G T +P PSQ +T ++P +T P +T + ++ F SP
Sbjct: 82 PGSTDTTLLPASTTTSGPSQ-ESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGS 140
Query: 126 TAATLRPASFSQPG 139
T TL P S + G
Sbjct: 141 THTTLFPDSTTSSG 154
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 73 QVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRP 132
Q PP L P P QAPPS P + P + A P+ A+ LL + F P PS
Sbjct: 620 QAPPXLALP-PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV----Q 674
Query: 133 ASFSQPGSAHTCSSA 147
A FS P S SA
Sbjct: 675 APFSPPASPPVSPSA 689
Score = 34.7 bits (78), Expect = 0.030
Identities = 44/150 (29%), Positives = 55/150 (36%), Gaps = 18/150 (12%)
Query: 9 TTATQSSRPRKREHTGPGAFRKASRQ---DPRPAWGGGGGSPFLRNQVKQ-AVAGRPLGG 64
+T S R+R G G R ASR P P R + A +P
Sbjct: 216 STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP--- 272
Query: 65 GRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCR--------ALPLLA 116
+ +G A PP + PR AP P ++ P A P G+ R A PL A
Sbjct: 273 -KPKGLQALRPPQVTPPRKDAAPALGPLSSSPL--ATPSPSGTKARPVPPPDNAATPLPA 329
Query: 117 SLFCPSPSCTAATLRPASFSQPGSAHTCSS 146
+L P T L P S S P S T S
Sbjct: 330 TLPPSPPLATPLPLAPPSPSAPPSLQTLPS 359
Score = 30.8 bits (68), Expect = 0.43
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 27/82 (32%)
Query: 73 QVPPLLQRPRPSQAPPS-------TPRANPPATHACFFPRGSTCRALPLLASLFCPSPSC 125
+VPPLL P P Q PPS +P A PP P+ A P L +L PSP
Sbjct: 756 RVPPLLAAP-PLQVPPSPPASLPMSPLAKPP-------PQAPPALATPPLQAL--PSP-- 803
Query: 126 TAATLRPASFSQPGSAHTCSSA 147
PASF PG A SA
Sbjct: 804 ------PASF--PGQAPFSPSA 817
Score = 30.0 bits (66), Expect = 0.74
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 75 PPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS 134
PPL P P +PP +P A PP R PLLA+ P A+L +
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPP------------RVPPLLAAPPLQVPPSPPASLPMSP 780
Query: 135 FSQP 138
++P
Sbjct: 781 LAKP 784
Score = 28.5 bits (62), Expect = 2.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 75 PPLLQRPRPSQAPPSTPRANPP 96
PPL P P +PP +P A PP
Sbjct: 702 PPLQVPPSPPASPPMSPSATPP 723
Score = 26.6 bits (57), Expect = 8.2
Identities = 32/106 (30%), Positives = 38/106 (35%), Gaps = 19/106 (17%)
Query: 33 RQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPR 92
R+D PA G SP L RP+ P P P+ PPS P
Sbjct: 289 RKDAAPALGPLSSSP-LATPSPSGTKARPV----------PPPDNAATPLPATLPPSPPL 337
Query: 93 ANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQP 138
A P P S A P L +L PSP T + P S + P
Sbjct: 338 ATPLPLAP---PSPS---APPSLQTL--PSPPATPPSQAPPSMTTP 375
Score = 26.6 bits (57), Expect = 8.2
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 76 PLLQRPRPSQAPPS---TPRANPPATHACFFPRGSTCRALPLLASLFCP--SPSCTAATL 130
P P P QAPPS TP P++ A P+ A P L L P SP T
Sbjct: 561 PPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQ 620
Query: 131 RPASFSQP 138
P + P
Sbjct: 621 APPXLALP 628
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 73 QVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRP 132
Q PP L P P QAPPS P + P + A P+ A+ LL + F P PS
Sbjct: 356 QAPPALALP-PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV----Q 410
Query: 133 ASFSQPGSAHTCSSA 147
A FS P S SA
Sbjct: 411 APFSPPASPPVSPSA 425
Score = 29.3 bits (64), Expect = 1.3
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 17/81 (20%)
Query: 75 PPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCP--------SPSCT 126
PPL P P +PP +P A PP P+ A P L P +P
Sbjct: 438 PPLQVPPSPPASPPMSPSATPP-------PQAPPPLAAPPLQLAKPPPQAPPALATPPLQ 490
Query: 127 AATLRPASFSQPGSAHTCSSA 147
A PASF PG A SA
Sbjct: 491 ALPSPPASF--PGQAPFSPSA 509
Score = 28.5 bits (62), Expect = 2.1
Identities = 38/135 (28%), Positives = 51/135 (37%), Gaps = 13/135 (9%)
Query: 9 TTATQSSRPRKREHTGPGAFRKASRQ---DPRPAWGGGGGSPFLRNQVKQ-AVAGRPLGG 64
+T S R+R G G R ASR P P R + A +P
Sbjct: 207 STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP--- 263
Query: 65 GRGQGCTAQVPPLLQRPRPSQAPPSTPRANPP-ATHACFFPRGSTCRALPLLASLFCPSP 123
+ +G A PP + PR AP P ++ P AT + P + A P L +L PSP
Sbjct: 264 -KPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPS--APPSLQTL--PSP 318
Query: 124 SCTAATLRPASFSQP 138
T + S P
Sbjct: 319 PATPPSQATTSLGSP 333
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 37.7 bits (86), Expect = 0.004
Identities = 43/160 (26%), Positives = 59/160 (36%), Gaps = 33/160 (20%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG---------GGGGSPFLRNQVKQA 56
P STTA + H+ PG+ D + G GSP R + A
Sbjct: 2623 PGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP--RTTLSPA 2680
Query: 57 VAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRG 106
+ P G +G+ T Q P PS PPST A +P +T FP
Sbjct: 2681 SSTSP--GLQGESTTFQTHPASTHTTPS--PPSTATAPVEESTTYHRSPGSTPTTHFPAS 2736
Query: 107 STCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSS 146
ST +++F SP + T P SAH+ +S
Sbjct: 2737 STTSGHSEKSTIFHSSPDASGTT--------PSSAHSTTS 2768
Score = 35.8 bits (81), Expect = 0.013
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 33/160 (20%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG---------GGGGSPFLRNQVKQA 56
P STTA + H+ PG+ D + G GSP R + A
Sbjct: 1066 PGSTTALSFGQESTTFHSNPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP--RTTLSPA 1123
Query: 57 VAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRG 106
+ P G +G+ Q P PS PPST A +P +T FP
Sbjct: 1124 SSTSP--GLQGESTAFQTHPASTHTTPS--PPSTATAPVEESTTYHRSPGSTPTTHFPAS 1179
Query: 107 STCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSS 146
ST +++F SP + T P SAH+ +S
Sbjct: 1180 STTSGHSEKSTIFHSSPDASGTT--------PSSAHSTTS 1211
Score = 35.8 bits (81), Expect = 0.013
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 33/160 (20%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG---------GGGGSPFLRNQVKQA 56
P STTA + H+ PG+ D + G GSP R + A
Sbjct: 2149 PGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP--RTTLSPA 2206
Query: 57 VAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRG 106
+ P G +G+ Q P PS PPST A +P +T FP
Sbjct: 2207 SSTSP--GLQGESTAFQTHPASTHTTPS--PPSTATAPVEESTTYHRSPGSTPTTHFPAS 2262
Query: 107 STCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSS 146
ST +++F SP + T P SAH+ +S
Sbjct: 2263 STTSGHSEKSTIFHSSPDASGTT--------PSSAHSTTS 2294
Score = 35.8 bits (81), Expect = 0.013
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 33/160 (20%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG---------GGGGSPFLRNQVKQA 56
P STTA + H+ PG+ D + G GSP R + A
Sbjct: 3706 PGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP--RTTLSPA 3763
Query: 57 VAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRG 106
+ P G +G+ Q P PS PPST A +P +T FP
Sbjct: 3764 SSTSP--GLQGESTAFQTHPASTHTTPS--PPSTATAPVEESTTYHRSPGSTPTTHFPAS 3819
Query: 107 STCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSS 146
ST +++F SP + T P SAH+ +S
Sbjct: 3820 STTSGHSEKSTIFHSSPDASGTT--------PSSAHSTTS 3851
Score = 33.1 bits (74), Expect = 0.087
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 89 STP-RANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPA-------------S 134
STP R +P +T P T +L ++ F SP ATL PA S
Sbjct: 1412 STPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTS 1471
Query: 135 FSQPGSAHT 143
SQPGS HT
Sbjct: 1472 HSQPGSTHT 1480
Score = 33.1 bits (74), Expect = 0.087
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 89 STP-RANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPA-------------S 134
STP R +P +T P T +L ++ F SP ATL PA S
Sbjct: 2495 STPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTS 2554
Query: 135 FSQPGSAHT 143
SQPGS HT
Sbjct: 2555 HSQPGSTHT 2563
Score = 33.1 bits (74), Expect = 0.087
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 89 STP-RANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPA-------------S 134
STP R +P +T P T +L ++ F SP ATL PA S
Sbjct: 2969 STPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTS 3028
Query: 135 FSQPGSAHT 143
SQPGS HT
Sbjct: 3029 HSQPGSTHT 3037
Score = 33.1 bits (74), Expect = 0.087
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 89 STP-RANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPA-------------S 134
STP R +P +T P T +L ++ F SP ATL PA S
Sbjct: 4052 STPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTS 4111
Query: 135 FSQPGSAHT 143
SQPGS HT
Sbjct: 4112 HSQPGSTHT 4120
Score = 32.7 bits (73), Expect = 0.11
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSSA 147
+T R+ P +TH FP +T L ++ SP T TL PAS + G + +++
Sbjct: 995 TTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 1053
Score = 32.7 bits (73), Expect = 0.11
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSSA 147
+T + P +TH FP +T L ++ SP T TL PAS + GS+ +++
Sbjct: 3635 TTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGSSQESTTS 3693
Score = 32.0 bits (71), Expect = 0.19
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSSA 147
ST + P +TH FP +T L ++ SP T TL PAS + G + +++
Sbjct: 2552 STSHSQPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 2610
Score = 30.8 bits (68), Expect = 0.43
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSSA 147
+T + P +TH FP +T L ++ SP T TL PAS + G + +++
Sbjct: 2078 TTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 2136
Score = 30.0 bits (66), Expect = 0.74
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 13/67 (19%)
Query: 88 PSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASF------------ 135
P++ + +TH FP +T L ++ F P T TL P S
Sbjct: 4909 PTSLYSQAESTHTTAFPASTTTSGLSQESTTFHSKPGSTETTLSPGSITTSSFAQEFTTP 4968
Query: 136 -SQPGSA 141
SQPGSA
Sbjct: 4969 HSQPGSA 4975
Score = 29.3 bits (64), Expect = 1.3
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 14/134 (10%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGG 65
P+STT++ S H+ PG+ + D G S +
Sbjct: 2065 PASTTSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHS-------------S 2111
Query: 66 RGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSC 125
G T +P PSQ +T ++P +T P +T + ++ F SP
Sbjct: 2112 PGSTDTTLLPASTTTSGPSQ-ESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGS 2170
Query: 126 TAATLRPASFSQPG 139
T TL P S + G
Sbjct: 2171 THTTLFPDSTTSSG 2184
Score = 28.9 bits (63), Expect = 1.6
Identities = 35/145 (24%), Positives = 48/145 (33%), Gaps = 11/145 (7%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG-GGGGSPFLRNQVKQAVAGRPLGG 64
P STTA+ H+GPG+ D A G +P + P G
Sbjct: 3320 PGSTTASSLGPESTTFHSGPGSTETTLLPDNTTASGLLEASTPVHSSTGSPHTTLSPAGS 3379
Query: 65 GRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRGSTCRALPL 114
QG + + APP+T A +P +T F ST
Sbjct: 3380 TTRQGESTTFQSWPNSKDTTPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSE 3439
Query: 115 LASLFCPSPSCTAATLRPASFSQPG 139
++ SP TA T PA + G
Sbjct: 3440 ESTTVHSSPVATATTPSPARSTTSG 3464
Score = 28.1 bits (61), Expect = 2.8
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS-------------F 135
+T + P +TH FP +T L ++ SP T TL P S
Sbjct: 665 TTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFH 724
Query: 136 SQPGSAHT 143
S+PGS T
Sbjct: 725 SRPGSTET 732
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 88 PSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCT----AATLRPASFSQPGSAHT 143
P+T + P +TH F ST L ++ F SP+ T ATL A + +
Sbjct: 1329 PTTFHSRPASTHTTLFTEDSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFP 1388
Query: 144 CSS 146
SS
Sbjct: 1389 SSS 1391
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 88 PSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCT----AATLRPASFSQPGSAHT 143
P+T + P +TH F ST L ++ F SP+ T ATL A + +
Sbjct: 2412 PTTFHSRPASTHTTLFTEDSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFP 2471
Query: 144 CSS 146
SS
Sbjct: 2472 SSS 2474
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 88 PSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCT----AATLRPASFSQPGSAHT 143
P+T + P +TH F ST L ++ F SP+ T ATL A + +
Sbjct: 2886 PTTFHSRPASTHTTLFTEDSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFP 2945
Query: 144 CSS 146
SS
Sbjct: 2946 SSS 2948
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 88 PSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCT----AATLRPASFSQPGSAHT 143
P+T + P +TH F ST L ++ F SP+ T ATL A + +
Sbjct: 3969 PTTFHSRPASTHTTLFTEDSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFP 4028
Query: 144 CSS 146
SS
Sbjct: 4029 SSS 4031
Score = 27.7 bits (60), Expect = 3.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS 134
ST + P +TH FP +T L + S T ATL P S
Sbjct: 3026 STSHSQPGSTHTTAFPDSTTTSGLSQEPTASHSSQGSTEATLSPGS 3071
Score = 27.7 bits (60), Expect = 3.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS 134
ST + P +TH FP +T L + S T ATL P S
Sbjct: 4109 STSHSQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPGS 4154
Score = 27.3 bits (59), Expect = 4.8
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 13/68 (19%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS-------------F 135
+T + P +TH FP +T + ++ SP T TL P S
Sbjct: 1720 TTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFH 1779
Query: 136 SQPGSAHT 143
S PGS T
Sbjct: 1780 SSPGSTET 1787
Score = 26.9 bits (58), Expect = 6.2
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS 134
ST + P +TH FP +T L + S T ATL P S
Sbjct: 1469 STSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGS 1514
Score = 26.9 bits (58), Expect = 6.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS 134
+T + P +TH FP +T + ++ SP T TL P S
Sbjct: 3277 TTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGS 3322
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 37.4 bits (85), Expect = 0.005
Identities = 39/153 (25%), Positives = 57/153 (37%), Gaps = 23/153 (15%)
Query: 3 ETKPSSTTATQSSRPRKREHTGPGA--FRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGR 60
ET+PS ++ P E + P + F +A R P G G SP L + +
Sbjct: 1186 ETRPSLDFPQEAKEPETAEESAPDSTEFTEALRSPPAACAGEMGASPGLLIPEQPPPSRH 1245
Query: 61 PLGGGRGQGCTAQVPP-----------LLQRPRPSQAPPSTPRANPPATHACFFPRGSTC 109
G + G A P LL P +QAP S +PPA G
Sbjct: 1246 DTGTPKPSGSLANTAPHGSSPTPGVGSLLGGPGGTQAPVSHNSKDPPARQP-----GEFL 1300
Query: 110 RALPLLASLFCPSPSCTAATLR-----PASFSQ 137
+ +S CP PS ++ + PA F++
Sbjct: 1301 APVANPSSTACPKPSVLSSKISSFGCDPAGFNR 1333
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 37.0 bits (84), Expect = 0.006
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 26/104 (25%)
Query: 36 PRPAWGG---GGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPR 92
P P G GGGSP + Q P G RG G Q PP R P PP +PR
Sbjct: 457 PEPGAGDEARGGGSPTSKTQTL------PSRGPRGGGAGEQPPPPSARSTPLPGPPGSPR 510
Query: 93 ANPPATHACFFPRGSTCRALPLLASLFCP--SPSCTAATLRPAS 134
++ G T PL + L P SP+ T T P S
Sbjct: 511 SS-----------GGT----PLHSPLHTPRASPTGTPGTTPPPS 539
>gi|13540521 basic helix-loop-helix domain containing, class B, 3
[Homo sapiens]
Length = 482
Score = 37.0 bits (84), Expect = 0.006
Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 18/120 (15%)
Query: 39 AWGGGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQR--------PRPSQAP--- 87
A+GGGGG+PF + A P A V P L + P + AP
Sbjct: 328 AFGGGGGAPFPQPAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPL 387
Query: 88 --PSTPRANPPATHACFFPRGSTCRALPLLASLFCPSP---SCTAATLRPASFSQPGSAH 142
P P P A A + A P L+S+ P P AATL P + G+ H
Sbjct: 388 LYPGIPA--PAAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAGAAAATLLPHEVAPLGAPH 445
Score = 29.6 bits (65), Expect = 0.96
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 14/125 (11%)
Query: 15 SRPRKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQV 74
+RP + + G GA R +Q+P G SP ++K G GGG G G A
Sbjct: 248 ARPDREKGKGAGASRVTIKQEP-----PGEDSP-APKRMKLDSRGGGSGGGPGGGAAAAA 301
Query: 75 PPLLQRPRPSQAPPSTPRANPPATHACF-------FPRGSTCRALPLLASLFCPSPSCTA 127
LL + A P A ++ F FP+ + A P SPS A
Sbjct: 302 AALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPAAA-AAPFCLPFCFLSPSAAA 360
Query: 128 ATLRP 132
A ++P
Sbjct: 361 AYVQP 365
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 35.8 bits (81), Expect = 0.013
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 33/160 (20%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAWG---------GGGGSPFLRNQVKQA 56
P STTA + H+ PG+ D + G GSP R + A
Sbjct: 553 PGSTTALSFGQESTTFHSNPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP--RTTLSPA 610
Query: 57 VAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRA----------NPPATHACFFPRG 106
+ P G +G+ Q P PS PPST A +P +T FP
Sbjct: 611 SSTSP--GLQGESTAFQTHPASTHTTPS--PPSTATAPVEESTTYHRSPGSTPTTHFPAS 666
Query: 107 STCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSS 146
ST +++F SP + T P SAH+ +S
Sbjct: 667 STTSGHSEKSTIFHSSPDASGTT--------PSSAHSTTS 698
Score = 33.1 bits (74), Expect = 0.087
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 89 STP-RANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPA-------------S 134
STP R +P +T P T +L ++ F SP ATL PA S
Sbjct: 899 STPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTS 958
Query: 135 FSQPGSAHT 143
SQPGS HT
Sbjct: 959 HSQPGSTHT 967
Score = 32.7 bits (73), Expect = 0.11
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSAHTCSSA 147
+T R+ P +TH FP +T L ++ SP T TL PAS + G + +++
Sbjct: 482 TTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 540
Score = 28.1 bits (61), Expect = 2.8
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS-------------F 135
+T + P +TH FP +T L ++ SP T TL P S
Sbjct: 152 TTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFH 211
Query: 136 SQPGSAHT 143
S+PGS T
Sbjct: 212 SRPGSTET 219
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 88 PSTPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCT----AATLRPASFSQPGSAHT 143
P+T + P +TH F ST L ++ F SP+ T ATL A + +
Sbjct: 816 PTTFHSRPASTHTTLFTEDSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFP 875
Query: 144 CSS 146
SS
Sbjct: 876 SSS 878
Score = 27.3 bits (59), Expect = 4.8
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 13/68 (19%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS-------------F 135
+T + P +TH FP +T + ++ SP T TL P S
Sbjct: 1207 TTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFH 1266
Query: 136 SQPGSAHT 143
S PGS T
Sbjct: 1267 SSPGSTET 1274
Score = 26.9 bits (58), Expect = 6.2
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 89 STPRANPPATHACFFPRGSTCRALPLLASLFCPSPSCTAATLRPAS 134
ST + P +TH FP +T L + S T ATL P S
Sbjct: 956 STSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGS 1001
>gi|34452695 amiloride-sensitive cation channel 1, neuronal
isoform 1 [Homo sapiens]
Length = 563
Score = 35.8 bits (81), Expect = 0.013
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 16/62 (25%)
Query: 23 TGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPR 82
TGPG FR A R++P PA A AG+P GGGRG Q P + +R R
Sbjct: 15 TGPGRFRMA-REEPAPA--------------ALAAAGQP-GGGRGGERALQGPGVARRGR 58
Query: 83 PS 84
PS
Sbjct: 59 PS 60
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 35.8 bits (81), Expect = 0.013
Identities = 31/104 (29%), Positives = 39/104 (37%), Gaps = 16/104 (15%)
Query: 8 STTATQSSRPRKREHTG---PGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGG 64
S T S P +R +G PG +PA GG + V A RPLG
Sbjct: 415 SKKPTNDSNPSRRTVSGTCGPG----------QPASSSGGPGRPISGSVSSA---RPLGS 461
Query: 65 GRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFFPRGST 108
RG G P L+RP PP + P + + P G T
Sbjct: 462 SRGPGRPVSSPHELRRPVSGLGPPGRSVSGPGRSISGSIPAGRT 505
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 35.4 bits (80), Expect = 0.018
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 19/102 (18%)
Query: 5 KPSSTTATQSSRP---RKREHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRP 61
K S + S RP R+ GPG +S GGGGG P G
Sbjct: 1378 KDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSS----GGGGGGP-----------GGR 1422
Query: 62 LGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHACFF 103
G GRG + P RP P + PP P PP + + F
Sbjct: 1423 TGPGRGDKRSWPSPKNRSRP-PEERPPGLPLPPPPPSSSAVF 1463
Score = 26.9 bits (58), Expect = 6.2
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 13 QSSRPRK---REHTGPGAFRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGGRGQG 69
Q+ P+K +E T +A R+ R GG G P R + + P G +G
Sbjct: 877 QTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRG 936
Query: 70 CTAQ---VPPLLQRPRPSQAPPSTPRANPP 96
+ PP P PP+ PP
Sbjct: 937 IPPEEPGAPPRRAGPIKKPPPPTKVEELPP 966
>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
Length = 315
Score = 35.4 bits (80), Expect = 0.018
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 16 RPRKREHTGPGAFRKASRQDPRPAWGGGGGS-----PFLRNQVKQAVAGRPLGGG 65
RPRK+ P R PRP G GGGS P L + + AG PLGGG
Sbjct: 110 RPRKKSKGAPAKAR------PRPPGGSGGGSRLKPGPQLPGRGGRRAAGGPLGGG 158
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 35.0 bits (79), Expect = 0.023
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 25/96 (26%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAW----GGGGGSPFLRNQVKQAVAGRP 61
PSS +A ++R +R RKA Q PRPA GGGG +L+
Sbjct: 97 PSSVSAGSAARTLRRGSEA----RKA--QTPRPAGVAQGSGGGGERWLQG---------- 140
Query: 62 LGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPA 97
LG RG+G + PP R P TPR PPA
Sbjct: 141 LGPPRGRGLSTAPPPSSLR-----LLPPTPRPFPPA 171
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 35.0 bits (79), Expect = 0.023
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 25/96 (26%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPAW----GGGGGSPFLRNQVKQAVAGRP 61
PSS +A ++R +R RKA Q PRPA GGGG +L+
Sbjct: 97 PSSVSAGSAARTLRRGSEA----RKA--QTPRPAGVAQGSGGGGERWLQG---------- 140
Query: 62 LGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPA 97
LG RG+G + PP R P TPR PPA
Sbjct: 141 LGPPRGRGLSTAPPPSSLR-----LLPPTPRPFPPA 171
>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
sapiens]
Length = 528
Score = 34.7 bits (78), Expect = 0.030
Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 27/158 (17%)
Query: 8 STTATQSSRPRKREHTGPGA------FRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRP 61
+ A SR R+ +GP A S +P G G LR+ A RP
Sbjct: 207 AVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRP 266
Query: 62 L--------GGGRGQGCTAQVPPLLQRPRPSQA----------PPSTPRANPPATHACFF 103
L G G A P P P +A P + P PP
Sbjct: 267 LPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVI 326
Query: 104 PRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSA 141
PR S CR +P A++ S S T RPAS S+ G A
Sbjct: 327 PRTSRCRLVP--AAVVGRSSSVTIDHSRPAS-SRGGGA 361
>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
sapiens]
Length = 528
Score = 34.7 bits (78), Expect = 0.030
Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 27/158 (17%)
Query: 8 STTATQSSRPRKREHTGPGA------FRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRP 61
+ A SR R+ +GP A S +P G G LR+ A RP
Sbjct: 207 AVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRP 266
Query: 62 L--------GGGRGQGCTAQVPPLLQRPRPSQA----------PPSTPRANPPATHACFF 103
L G G A P P P +A P + P PP
Sbjct: 267 LPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVI 326
Query: 104 PRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSA 141
PR S CR +P A++ S S T RPAS S+ G A
Sbjct: 327 PRTSRCRLVP--AAVVGRSSSVTIDHSRPAS-SRGGGA 361
>gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 528
Score = 34.7 bits (78), Expect = 0.030
Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 27/158 (17%)
Query: 8 STTATQSSRPRKREHTGPGA------FRKASRQDPRPAWGGGGGSPFLRNQVKQAVAGRP 61
+ A SR R+ +GP A S +P G G LR+ A RP
Sbjct: 207 AVAARSCSRRRRVGTSGPEASTLSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRP 266
Query: 62 L--------GGGRGQGCTAQVPPLLQRPRPSQA----------PPSTPRANPPATHACFF 103
L G G A P P P +A P + P PP
Sbjct: 267 LPCESLRTPSGTAGPRSPASGPDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVI 326
Query: 104 PRGSTCRALPLLASLFCPSPSCTAATLRPASFSQPGSA 141
PR S CR +P A++ S S T RPAS S+ G A
Sbjct: 327 PRTSRCRLVP--AAVVGRSSSVTIDHSRPAS-SRGGGA 361
>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
Length = 890
Score = 34.3 bits (77), Expect = 0.039
Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 36/163 (22%)
Query: 3 ETKPSSTTATQSS-RPRKREHTGPGAFRKAS---------------RQDPRPAWGGGGGS 46
++ PS ++ S+ RPR+RE R+A+ R PR + GGGG
Sbjct: 8 DSSPSGRGSSSSAKRPREREREAEAGGRRAAHKASGGAKHPVPARARDKPRGSGSGGGGH 67
Query: 47 PFLR---NQVKQAVAGRPLG---GGRGQGCTAQVPPLLQ--RPRPSQAPPSTPRANPPAT 98
R + +A +GR G GG G+G A P PR S PP P P A
Sbjct: 68 RDGRGTGDANHRASSGRSSGSGAGGGGRGGKASGDPGASGMSPRASPLPPPPP--PPGAE 125
Query: 99 HACFFPRGSTCRA----LPLLASLFCPSPSCTAATLRPASFSQ 137
AC GS+ A L++SL SP+ A L F Q
Sbjct: 126 PAC---PGSSAAAPEYKTLLISSL---SPALPAEHLEDRLFHQ 162
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 33.9 bits (76), Expect = 0.051
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 31 ASRQDPRPAWGGGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPP 76
A + DPR GGGGGSP K P G G G + PP
Sbjct: 208 ADKGDPRTGAGGGGGSPC----TKATPGSEPKGAAEGSGGDGEGPP 249
>gi|169204510 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 33.9 bits (76), Expect = 0.051
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 18/81 (22%)
Query: 29 RKASRQDPRPAWGGGGGSPFLRNQVKQ-----AVAGRPLGGGR-GQGCTAQV-------- 74
+K++++ W GG G PF Q+ AGR LG R G+G +QV
Sbjct: 56 QKSAQRKLSTTWLGGAGGPFPAAQLLPRAACGPAAGRELGVARAGRGIPSQVGRDGVSRT 115
Query: 75 ----PPLLQRPRPSQAPPSTP 91
P+ + PRP + PP +P
Sbjct: 116 TAGPTPIPRAPRPWRPPPPSP 136
>gi|169205117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 33.9 bits (76), Expect = 0.051
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 18/81 (22%)
Query: 29 RKASRQDPRPAWGGGGGSPFLRNQVKQ-----AVAGRPLGGGR-GQGCTAQV-------- 74
+K++++ W GG G PF Q+ AGR LG R G+G +QV
Sbjct: 56 QKSAQRKLSTTWLGGAGGPFPAAQLLPRAACGPAAGRELGVARAGRGIPSQVGRDGVSRT 115
Query: 75 ----PPLLQRPRPSQAPPSTP 91
P+ + PRP + PP +P
Sbjct: 116 TAGPTPIPRAPRPWRPPPPSP 136
>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
Length = 1288
Score = 33.9 bits (76), Expect = 0.051
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 31/149 (20%)
Query: 6 PSSTTATQSSRPRKREHTGPGAFRKASRQDPRPA-------------------WGGGGGS 46
PS +TA+ + K TGPG+ R +S Q +PA W +
Sbjct: 893 PSKSTASLT----KPHSTGPGSGR-SSCQPRKPALDLSSPPATSQSPEVKGGTWSQAEKA 947
Query: 47 PFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQ--APPSTPRANPPATHACFFP 104
L Q ++A+A G GQ T++ L RPR S+ +PP +A+P TH + P
Sbjct: 948 TSLYRQPRKAIAWHHSGPPSGQNRTSESS--LARPRQSRERSPPVGRKASPTRTH--WVP 1003
Query: 105 RG-STCRALPLLASLFCPSPSCTAATLRP 132
+ R+LP PSPS P
Sbjct: 1004 QADKRRRSLPSSYRPAQPSPSAVQTPPSP 1032
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 33.5 bits (75), Expect = 0.067
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 14/107 (13%)
Query: 2 NETKPSSTTATQSSRPRKREHTGPGAFRKA-----SRQDPRPAWG--GGGGSPFLRNQVK 54
+ + SS++++ SS+ +K + P AF P P WG G L +K
Sbjct: 104 SSSSSSSSSSSSSSQAKKPDPPLPPAFGAPPPPLFDAAFPTPQWGIVDLSGHQHLFGNLK 163
Query: 55 QAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPSTPRANPPATHAC 101
+ G G G A P L P PSQ PP PPA AC
Sbjct: 164 RGGPASGPGVTPGLGAPAGAPGPL--PAPSQTPP-----GPPAAAAC 203
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,179,748
Number of Sequences: 37866
Number of extensions: 518328
Number of successful extensions: 4734
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 373
Number of HSP's that attempted gapping in prelim test: 4072
Number of HSP's gapped (non-prelim): 969
length of query: 148
length of database: 18,247,518
effective HSP length: 93
effective length of query: 55
effective length of database: 14,725,980
effective search space: 809928900
effective search space used: 809928900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.