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Search of human proteins with 169167523
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]
(173 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169167523 PREDICTED: hypothetical protein [Homo sapiens] 364 e-101
gi|169168105 PREDICTED: hypothetical protein [Homo sapiens] 359 e-100
gi|169168280 PREDICTED: hypothetical protein [Homo sapiens] 263 7e-71
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|239755398 PREDICTED: hypothetical protein [Homo sapiens] 36 0.019
gi|154813195 DENN/MADD domain containing 2A [Homo sapiens] 35 0.042
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 34 0.055
gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo ... 34 0.055
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ... 34 0.072
gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens] 33 0.094
gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens] 33 0.12
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 33 0.12
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 33 0.12
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 33 0.12
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 33 0.12
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 33 0.12
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|239744409 PREDICTED: hypothetical protein XP_002343155 [Homo ... 33 0.16
gi|5803080 macrophage receptor with collagenous structure [Homo ... 33 0.16
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 33 0.16
gi|120587019 zinc finger protein 318 [Homo sapiens] 33 0.16
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 32 0.21
gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo... 32 0.27
>gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 364 bits (935), Expect = e-101
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG
Sbjct: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
Query: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGA 120
PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGA
Sbjct: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGA 120
Query: 121 AADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
AADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC
Sbjct: 121 AADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
>gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 359 bits (922), Expect = e-100
Identities = 171/173 (98%), Positives = 172/173 (99%)
Query: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG
Sbjct: 1 MKEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEG 60
Query: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGA 120
PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLP A
Sbjct: 61 PRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVA 120
Query: 121 AADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
AADGRLKL+LWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC
Sbjct: 121 AADGRLKLQLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMVLLC 173
>gi|169168280 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 263 bits (671), Expect = 7e-71
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 51 RRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSG 110
RRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSG
Sbjct: 2 RRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSG 61
Query: 111 SAAEKPLPGAAADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMV 170
SAAEKPLPGAAADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMV
Sbjct: 62 SAAEKPLPGAAADGRLKLRLWRGASPQVAVKCFVQTKLQRLLPNRWKQSVWTKESFFLMV 121
Query: 171 LLC 173
LLC
Sbjct: 122 LLC 124
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 40.4 bits (93), Expect = 8e-04
Identities = 41/125 (32%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLE----------SPPHPETQRPRAGAGGR--RR 52
GG AQR RAG ++ G APS G E PP PE AGGR RR
Sbjct: 46 GGRSAQR-RAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPE-----GWAGGRKLRR 99
Query: 53 WGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSA 112
W PRR + C P + R R AP P + G G+ G
Sbjct: 100 WLP-----PRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEW 154
Query: 113 AEKPL 117
A +PL
Sbjct: 155 AAEPL 159
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 40.4 bits (93), Expect = 8e-04
Identities = 41/125 (32%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLE----------SPPHPETQRPRAGAGGR--RR 52
GG AQR RAG ++ G APS G E PP PE AGGR RR
Sbjct: 46 GGRSAQR-RAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPE-----GWAGGRKLRR 99
Query: 53 WGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSA 112
W PRR + C P + R R AP P + G G+ G
Sbjct: 100 WLP-----PRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEW 154
Query: 113 AEKPL 117
A +PL
Sbjct: 155 AAEPL 159
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 40.4 bits (93), Expect = 8e-04
Identities = 41/125 (32%), Positives = 48/125 (38%), Gaps = 23/125 (18%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLE----------SPPHPETQRPRAGAGGR--RR 52
GG AQR RAG ++ G APS G E PP PE AGGR RR
Sbjct: 46 GGRSAQR-RAGAGARRPIGAAPSVGPGGELQGWGRKSGCRPPGPE-----GWAGGRKLRR 99
Query: 53 WGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSA 112
W PRR + C P + R R AP P + G G+ G
Sbjct: 100 WLP-----PRRFSNFCCRSPCAQTAVRRRRRRAPSPRGAGWREGAGAGRGTPATMAGGEW 154
Query: 113 AEKPL 117
A +PL
Sbjct: 155 AAEPL 159
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/132 (29%), Positives = 46/132 (34%), Gaps = 21/132 (15%)
Query: 13 RAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADP 72
R G + WG + G+ P P R G GG GG G R RA P
Sbjct: 168 RGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG----SEGGGGGARPSPPRARQPP 223
Query: 73 GTRP---------FTYRWNRDAPFPGRGRFSRTRG---DGKRARTEAPSGSAAEKPLPGA 120
RP R A G+ SR + R R A S SAA +P G
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 121 A-----ADGRLK 127
A ADGR +
Sbjct: 284 ARGHRRADGRAR 295
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/132 (29%), Positives = 46/132 (34%), Gaps = 21/132 (15%)
Query: 13 RAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADP 72
R G + WG + G+ P P R G GG GG G R RA P
Sbjct: 168 RGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG----SEGGGGGARPSPPRARQPP 223
Query: 73 GTRP---------FTYRWNRDAPFPGRGRFSRTRG---DGKRARTEAPSGSAAEKPLPGA 120
RP R A G+ SR + R R A S SAA +P G
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 121 A-----ADGRLK 127
A ADGR +
Sbjct: 284 ARGHRRADGRAR 295
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/132 (29%), Positives = 46/132 (34%), Gaps = 21/132 (15%)
Query: 13 RAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADP 72
R G + WG + G+ P P R G GG GG G R RA P
Sbjct: 168 RGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGG----SEGGGGGARPSPPRARQPP 223
Query: 73 GTRP---------FTYRWNRDAPFPGRGRFSRTRG---DGKRARTEAPSGSAAEKPLPGA 120
RP R A G+ SR + R R A S SAA +P G
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 121 A-----ADGRLK 127
A ADGR +
Sbjct: 284 ARGHRRADGRAR 295
>gi|239755398 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 35.8 bits (81), Expect = 0.019
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 62 RRPATRACA---DPGTRPFTYRWNRDAPFPGRGRFSR----TRGDGKRARTEAPSGSAAE 114
R+ +TR+ A PG RP + R P G G R RG G R A + SAA
Sbjct: 13 RKYSTRSAAFQKPPGRRPMSSRPLSRTPPHGGGEMVRRPSGARGGGDPGRPGARAFSAAS 72
Query: 115 ----KPLPGAAADGRLKLRLWRGASP 136
+P AA GR LWR SP
Sbjct: 73 CQAGRPWRCGAAGGRAAAALWRAGSP 98
Score = 30.4 bits (67), Expect = 0.80
Identities = 29/110 (26%), Positives = 39/110 (35%), Gaps = 15/110 (13%)
Query: 38 PETQRPRAGAGG--RRRWGATGGEGPRRPATRA-------------CADPGTRPFTYRWN 82
P ++ P G G RR GA GG P RP RA C G R W
Sbjct: 35 PLSRTPPHGGGEMVRRPSGARGGGDPGRPGARAFSAASCQAGRPWRCGAAGGRAAAALWR 94
Query: 83 RDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGAAADGRLKLRLWR 132
+P P R+ + + +A G ++ A+ RL L R
Sbjct: 95 AGSPNPENPRYPPPSHQHQHEKLDALEGCSSPITAAQPASGFRLHRALER 144
>gi|154813195 DENN/MADD domain containing 2A [Homo sapiens]
Length = 1009
Score = 34.7 bits (78), Expect = 0.042
Identities = 41/139 (29%), Positives = 51/139 (36%), Gaps = 19/139 (13%)
Query: 3 EVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGAT------ 56
E G + G S+ + V PS LEG E P PE R G+ RR W +
Sbjct: 196 EAGSTLPENLGGGSGSEVSQRVHPSDLEGRE--PTPELVEDRKGSC-RRPWDRSLENVYR 252
Query: 57 GGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDG--KRARTEAPSGSAAE 114
G EG T+ +P +P R G G G G K R P S
Sbjct: 253 GSEGS---PTKPFINPLPKP-----RRTFKHAGEGDKDGKPGIGFRKEKRNLPPLPSLPP 304
Query: 115 KPLPGAAADGRLKLRLWRG 133
PLP + + RLW G
Sbjct: 305 PPLPSSPPPSSVNRRLWTG 323
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 34.3 bits (77), Expect = 0.055
Identities = 41/130 (31%), Positives = 51/130 (39%), Gaps = 32/130 (24%)
Query: 14 AGEVSKETWGVAPS----TLEGL----------ESPPHP-----ETQRPRAGAGGRRRWG 54
+ +S+ET GV P ++GL + PP P R R G G R R
Sbjct: 11 SSSLSRETIGVQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARARRGGGARER-P 69
Query: 55 ATGGEGPR--RPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSA 112
A G GPR R RA P + P R P R S +R +APS SA
Sbjct: 70 AEGARGPRAARGGARAAPMPSSAP------RGPTEPALRRPS----SAERPLAQAPSSSA 119
Query: 113 AEKPLPGAAA 122
+ PGA A
Sbjct: 120 SVGRAPGAMA 129
>gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo
sapiens]
Length = 199
Score = 34.3 bits (77), Expect = 0.055
Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 16/150 (10%)
Query: 32 LESPPHPETQRPRAGAGGRRRWG--ATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPG 89
LE+P E A G R+WG G PR T A + P T T DAP P
Sbjct: 15 LEAPGTAERGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPP 74
Query: 90 RGRFS-----RTRGDGKRARTEAPSGSAA-------EKPLPGAAADGRLKLRLWRGASPQ 137
S R G+ R + +A+ PL + R + LW+G + Q
Sbjct: 75 FSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVNERFRRSLWKGINSQ 134
Query: 138 VAV--KCFVQTKLQRLLPNRWKQSVWTKES 165
+ + C ++ L + WK + W + +
Sbjct: 135 LTLFGICLFRSCLLKKEGWEWKGAEWGRSA 164
>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
sapiens]
Length = 337
Score = 33.9 bits (76), Expect = 0.072
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 12 QRAGEVSKETWGVAPSTLEGLESPPHPETQRPRA---GAGGRRR---WGATGGEGPRRPA 65
Q AG + G +P T G + QR +A GA R++ WG ++ A
Sbjct: 121 QDAGRAGSQVCGSSPQTRGG----GGKKLQRQKATVMGAKSRKKPQHWG-------QKAA 169
Query: 66 TRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDG-KRARTEAPSGSAAEKPLPGAAADG 124
T PG + A + R +++RG G K+ R E P+ + A+ P AAA
Sbjct: 170 TAGAKSPGGGGKKPGQEKPAATGEKTRAAKSRGGGGKKPRREKPAAAGAKNPQKAAAAGA 229
Query: 125 RLK 127
+ +
Sbjct: 230 KFR 232
>gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 317
Score = 33.5 bits (75), Expect = 0.094
Identities = 36/123 (29%), Positives = 42/123 (34%), Gaps = 22/123 (17%)
Query: 25 APSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTRPFTYRWNRD 84
AP + L S P P RP G G R G PA PG R D
Sbjct: 58 APRPVPALPSSPSPPPPRPFRGRGPHRSLGCDAA-----PAALGNGRPGAR-------SD 105
Query: 85 APFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGAAADGRLKLRLW--RGASPQVAVKC 142
P G G G+ + + PLP GR R W GASP V +C
Sbjct: 106 RPCGAGG-----DGGGRLPGDDDDNDEEQPPPLP---LTGRCWARAWAREGASPVVEKRC 157
Query: 143 FVQ 145
+Q
Sbjct: 158 PLQ 160
>gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens]
Length = 362
Score = 33.1 bits (74), Expect = 0.12
Identities = 40/131 (30%), Positives = 49/131 (37%), Gaps = 18/131 (13%)
Query: 20 ETWGVAPSTLEGLESPPHPETQRPRAGAGG--RRRWGATGGEGPRRPATRACAD------ 71
+T +APS G + PP PET AG G G+ G RPA RA A
Sbjct: 92 QTCALAPSEASGAQYPPPPETLGAYAGGPGLVAGLLGSEDHSGWVRPALRARAPDAFVGP 151
Query: 72 -----PGTRPFTYRWNRDAPFPGRGR----FSRTRGDGKRARTEAPSGSAAEKPLPGAAA 122
P P P PG G F RT G A + AP G + P A
Sbjct: 152 ALAPAPAPEPKALALQPVYPGPGAGSSGGYFPRT-GLSVPAASGAPYGLLSGYPAMYPAP 210
Query: 123 DGRLKLRLWRG 133
+ +L+RG
Sbjct: 211 QYQGHFQLFRG 221
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 33.1 bits (74), Expect = 0.12
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 18/97 (18%)
Query: 30 EGLESPPHPETQRPRAGAGGRRRWGATGGE--GPRRPATRACADPGT--------RPFTY 79
EG + PP ET +P A GG G G RR RA PG+ RP +
Sbjct: 48 EGRQRPP--ETLQPPANRGG----GPVGAPRVSRRREGLRALKVPGSEPQVGAEVRPSSR 101
Query: 80 RWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKP 116
+ D GRGR R R +R T+AP G KP
Sbjct: 102 KSLSDHRGLGRGR--RRRRQRRRWGTQAPCGRLRAKP 136
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 33.1 bits (74), Expect = 0.12
Identities = 36/96 (37%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 35 PPHPETQRPRAGAGGRRRW-GATGGEGPRRPATRACADPGTR-----PFTYRWNRDAPFP 88
P P QRP A R W GA G A PG+R P T+R P P
Sbjct: 45 PILPAPQRPPTRA---REWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAP 101
Query: 89 G--RGRFSRTRGDGKRARTEAPSGSAAEKPLPGAAA 122
G R R S R G R R APS SA ++P A A
Sbjct: 102 GAPRARGSCGREPGPR-RRRAPS-SAGKRPAAAARA 135
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 33.1 bits (74), Expect = 0.12
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 93 FSRTRGDGKRARTEAPSGSAAEKPLPGAAADGRLKLRLWRGASPQVAVKCFV-QTKLQRL 151
F T KR R PSG A+ +PL +A+D LK ASP +++ Q LQRL
Sbjct: 346 FRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGEAQPAASPGPSLRSLPHQLLLQRL 405
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 33.1 bits (74), Expect = 0.12
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRP 64
G ++ R AG + + ++SP P+ +P G R G G ++P
Sbjct: 256 GAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKP 315
Query: 65 ATRACADPGTR--PFTYRWNRDAPFPGRG----RFSRTRGDGKRARTEAPSGSAAEKPLP 118
A +DPGT P R +P G R S G +A AP +AA +P P
Sbjct: 316 EV-APSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPP 374
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 33.1 bits (74), Expect = 0.12
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 7/120 (5%)
Query: 5 GGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRP 64
G ++ R AG + + ++SP P+ +P G R G G ++P
Sbjct: 252 GAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKP 311
Query: 65 ATRACADPGTR--PFTYRWNRDAPFPGRG----RFSRTRGDGKRARTEAPSGSAAEKPLP 118
A +DPGT P R +P G R S G +A AP +AA +P P
Sbjct: 312 EV-APSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPP 370
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 33.1 bits (74), Expect = 0.12
Identities = 32/89 (35%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 31 GLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGR 90
G ESP P + G GGR GA G RR R + P R P P R
Sbjct: 360 GKESPS-PRSAPSSQGRGGRAAGGA-GRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPR 417
Query: 91 GRFSRTRGDGKRARTEAPSGSAAEKPLPG 119
G SR+ RAR+ + SGS P PG
Sbjct: 418 GS-SRSLS---RARSSSDSGSGRGAPGPG 442
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 33.1 bits (74), Expect = 0.12
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 5 GGEEAQRQRAGEVSK-ETWGVAPSTLEGLESPPHPETQRP--RAGAGGRRRWG--ATGGE 59
GG Q + GE E P TL G+ SPPHP + P A RR+G TG
Sbjct: 369 GGPPIQDEDEGEEGPTEPPPAEPRTLNGVSSPPHPSPKSPVQLEEAPFSRRFGLLKTGSS 428
Query: 60 GPRRPATRACAD 71
G P R A+
Sbjct: 429 GALGPPERRTAE 440
Score = 27.7 bits (60), Expect = 5.2
Identities = 32/129 (24%), Positives = 45/129 (34%), Gaps = 18/129 (13%)
Query: 4 VGGEEAQRQRAG------EVSKETWGVAPSTLEGLESPPH--PETQRPRAGAGGRRRWGA 55
V EE++ QR + + T GV + L+ E PE+++P RR
Sbjct: 537 VRDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKAAGKAPESEKPAQSLDPSRRPRV 596
Query: 56 TGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEK 115
G E PA RA A G P P R R G R E A++
Sbjct: 597 PGVENSDSPAQRAEAPDG----------QGPGPQAAREHRKVGKEWRGPAEGEEAEPADR 646
Query: 116 PLPGAAADG 124
+ +G
Sbjct: 647 SQESSTLEG 655
>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 292
Score = 32.7 bits (73), Expect = 0.16
Identities = 30/81 (37%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 46 GAGGRRRWGATGGEGPRRPATRACADPG-----TRPFTYRWNRDAPFPGRGRFSR--TRG 98
G G R GA G G RRPA R A PG R + R AP PGR SR G
Sbjct: 2 GLGPRPSAGAGAGAG-RRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAG 60
Query: 99 DGKRARTEAPSGSAAEKPLPG 119
A E + +P PG
Sbjct: 61 SSCLATPEPARAPSIAEPGPG 81
>gi|239744409 PREDICTED: hypothetical protein XP_002343155 [Homo
sapiens]
Length = 106
Score = 32.7 bits (73), Expect = 0.16
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 12 QRAGEVSKETW---GVAPSTL-EGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATR 67
+RAG S + G A TL G SPP RP AG GR +G +GP+RP
Sbjct: 17 RRAGPESLRAFAPAGEAQKTLPRGSASPPRSPALRPAAGLRGR-----SGAQGPQRP--- 68
Query: 68 ACADPGTRPFTYRWNRDAPFPGRGRFSRTR---GDGKR 102
RP Y +++A P R +R R G+ +R
Sbjct: 69 -------RPAHYN-SQEASRPDRRGATRERCVCGESRR 98
>gi|5803080 macrophage receptor with collagenous structure [Homo
sapiens]
Length = 520
Score = 32.7 bits (73), Expect = 0.16
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 29 LEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTR-PFTYRWNRDAP- 86
+ G PP P ++ GA GR GATG GP+ P PG + + + AP
Sbjct: 164 MPGAPGPPGPPAEKGAKGAMGRD--GATGPSGPQGP-------PGVKGEAGLQGPQGAPG 214
Query: 87 ------FPGRGRFSRTRGDGKRARTEAPSGSAAEK---PLPGAAADGRLK 127
PG ++GDG + +G+ EK LPG+ D +K
Sbjct: 215 KQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMK 264
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 32.7 bits (73), Expect = 0.16
Identities = 35/118 (29%), Positives = 42/118 (35%), Gaps = 22/118 (18%)
Query: 2 KEVGGEEAQRQRAGEVSKETWGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGP 61
+ VGG+ + + G + P L GL PP P + G G GA GG GP
Sbjct: 667 RAVGGDRQEAIQPGCIG------GPKGLPGLPGPPGPTGAKGLRGIPGFA--GADGGPGP 718
Query: 62 RRPATRACADPGTRPFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPG 119
R PG R+ FPG F RG P GS LPG
Sbjct: 719 R-------GLPGDA------GREG-FPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPG 762
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 32.7 bits (73), Expect = 0.16
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 40 TQRPRAGAGGRRRWGATGGE--GPRR-------PATRACADPGTRPFT---YRWNRDAPF 87
+ RP+ GG R G + G GP R P+ + P RP + +R R +P
Sbjct: 12 SHRPKDDGGGGPRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPS 71
Query: 88 PGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGAAADGR 125
P RGR R RAR +PS + P A R
Sbjct: 72 PPRGR--RVSPSPPRARRGSPSPPRGRRLFPPGPAGFR 107
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 32.3 bits (72), Expect = 0.21
Identities = 38/121 (31%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 20 ETWGVAPSTLEGLESPPHPETQRP-RAGAGGRRRWGATGGEGPRRPATRACADPGTRPFT 78
E GVAP +G P P +RP GA G G G EG A A
Sbjct: 6 EPEGVAPGP-QGPPEVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVK------ 58
Query: 79 YRWNRDAPFPGRGRFSRTRGD-GKRARTEAPSGS--AAEKPLPGAAADGRLKLRLWRGAS 135
P RG + RG G TEA G+ AE P G G ++ GAS
Sbjct: 59 ---EAGGGGPDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQGGEETSGAQQV---EGAS 112
Query: 136 P 136
P
Sbjct: 113 P 113
>gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo
sapiens]
Length = 173
Score = 32.0 bits (71), Expect = 0.27
Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 35 PPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFS 94
P H + QRP GA R GA TRA PG P + PGRG
Sbjct: 105 PGHDDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLP----GHAGGAAPGRGAAG 160
Query: 95 RTRGDGKRAR 104
R R G AR
Sbjct: 161 RARCLGPSAR 170
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,694,156
Number of Sequences: 37866
Number of extensions: 513364
Number of successful extensions: 2870
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 2659
Number of HSP's gapped (non-prelim): 466
length of query: 173
length of database: 18,247,518
effective HSP length: 95
effective length of query: 78
effective length of database: 14,650,248
effective search space: 1142719344
effective search space used: 1142719344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.