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Search of human proteins with 169166960
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169166960 PREDICTED: hypothetical protein [Homo sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169166960 PREDICTED: hypothetical protein [Homo sapiens] 446 e-126
gi|169166769 PREDICTED: hypothetical protein [Homo sapiens] 441 e-124
gi|169166416 PREDICTED: hypothetical protein [Homo sapiens] 441 e-124
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 51 9e-07
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 49 3e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 48 6e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 47 1e-05
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 47 1e-05
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 47 1e-05
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 47 2e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 47 2e-05
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 45 4e-05
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 45 5e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 45 5e-05
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 45 6e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 43 2e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens] 43 2e-04
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 42 5e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 40 0.001
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 40 0.001
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 40 0.001
gi|4758410 fragile X mental retardation syndrome related protein... 40 0.001
gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo ... 40 0.002
gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo ... 40 0.002
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 40 0.002
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 40 0.002
gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens] 40 0.002
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 40 0.002
>gi|169166960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 446 bits (1146), Expect = e-126
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MTVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
MTVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS
Sbjct: 1 MTVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
Query: 61 PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP
Sbjct: 61 PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES
Sbjct: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
Query: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT
Sbjct: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
>gi|169166769 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 441 bits (1135), Expect = e-124
Identities = 214/216 (99%), Positives = 214/216 (99%)
Query: 1 MTVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
MTVSERRDRKGTLRPQGKNRHQK PPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS
Sbjct: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
Query: 61 PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PP RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP
Sbjct: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES
Sbjct: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
Query: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT
Sbjct: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
>gi|169166416 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 441 bits (1135), Expect = e-124
Identities = 214/216 (99%), Positives = 214/216 (99%)
Query: 1 MTVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
MTVSERRDRKGTLRPQGKNRHQK PPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS
Sbjct: 1 MTVSERRDRKGTLRPQGKNRHQKPPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
Query: 61 PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PP RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP
Sbjct: 61 PPARPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES
Sbjct: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
Query: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT
Sbjct: 181 SRLQSQEGDGSGGKDEASSAAITEYLLCLRTWKMKT 216
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 50.8 bits (120), Expect = 9e-07
Identities = 56/204 (27%), Positives = 78/204 (38%), Gaps = 14/204 (6%)
Query: 5 ERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTR 64
+RR R + + G +R + T + R + R + +R G S ++ AR G S
Sbjct: 529 QRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRT 588
Query: 65 PGRHRGGCAWTPNQRPEAA---AREARDAGRLRAKRGG-LREPERQRQEV------SYRH 114
P R R TP +R + AR R R A+R R P R+R S R
Sbjct: 589 PARRRSRSR-TPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647
Query: 115 RATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRR 174
R+ P RSR P R R T R+ R P S+ R RR R+R
Sbjct: 648 RSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSR---SRTPARRGRSRSRTPRRGRSRS 704
Query: 175 RTNEESSRLQSQEGDGSGGKDEAS 198
R+ R S+ G +S
Sbjct: 705 RSLVRRGRSHSRTPQRRGRSGSSS 728
Score = 50.1 bits (118), Expect = 1e-06
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 14/180 (7%)
Query: 6 RRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRP 65
RR R + P + +TP + R + ARR R + A+ +RT SP R
Sbjct: 580 RRGRSRSRTPARRRSRSRTPTRRRSR----SRTPARRGRSRSRTPARRRSRT-RSPVRRR 634
Query: 66 GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRS 125
R R + R AR R R A+RG R R S R R+ P RS
Sbjct: 635 SRSRSPARRSGRSRSRTPARRGRSRSRTPARRG--RSRSRTPARRSGRSRSRTPARRGRS 692
Query: 126 RRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQS 185
R PRR R+ ++RG + TP + + + + RT++ SR S
Sbjct: 693 R------SRTPRRGRSRSRSLVRRG-RSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNS 745
Score = 48.9 bits (115), Expect = 3e-06
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 6 RRDRKGTLRPQGKNRHQKTPPQNRQK------KTRVKSAAARRSRRLGESTAKPGARTGH 59
RR R + P+ ++R TPP++R+ + KS ++RR R K +R G
Sbjct: 1705 RRSRSASSSPETRSR---TPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761
Query: 60 SPPTRP-GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATL 118
SP +P G R + + ++R + RD R+ R R V+ R R
Sbjct: 1762 SPSPKPRGLQR---SRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGS 1818
Query: 119 PPH---PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRG--ARRARTR 173
H P R S + R R PP ++ KR + P P S+ R A R+R
Sbjct: 1819 GYHSRSPARQESSRTSSRRRRGRSRTPPTSR-KRSRSRTSPAPWKRSRSRASPATHRRSR 1877
Query: 174 RRT 176
RT
Sbjct: 1878 SRT 1880
Score = 45.8 bits (107), Expect = 3e-05
Identities = 52/191 (27%), Positives = 77/191 (40%), Gaps = 37/191 (19%)
Query: 2 TVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSR------RLGESTAKPGA 55
T + RR R T +G++R +TP + R +R +S RRSR R G S ++ A
Sbjct: 598 TPTRRRSRSRTPARRGRSR-SRTPARRR---SRTRSPVRRRSRSRSPARRSGRSRSRTPA 653
Query: 56 RTGHSPPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHR 115
R G S P R + TP AR +GR R++ R R R
Sbjct: 654 RRGRSRSRTPARRGRSRSRTP----------ARRSGRSRSRTPARRGRSRSRT------- 696
Query: 116 ATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRR 175
P R R + +L R R + P+ + + G S SQ RR+R+
Sbjct: 697 ------PRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ----RRSRSNSS 746
Query: 176 TNEESSRLQSQ 186
+ SR+ S+
Sbjct: 747 PEMKKSRISSR 757
Score = 43.5 bits (101), Expect = 1e-04
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 24/198 (12%)
Query: 3 VSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
V R + R G++R +TP + + ++R ARR R + A+ R+ P
Sbjct: 631 VRRRSRSRSPARRSGRSR-SRTPARRGRSRSRTP---ARRGRSRSRTPARRSGRSRSRTP 686
Query: 63 TRPGRHRGGCAWTPNQRPEAAAREARDAGRL---RAKRGGLREPERQRQEVSYRHRATLP 119
R GR R R + R R R R + G E + + + R R+
Sbjct: 687 ARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSS 746
Query: 120 PHPLRSRRSAPTLGARPRRPTWPPRAQ------LKRGDQQPPPTPSPASQ--PR----GA 167
P +SR + +R R PR++ L+R P P SQ PR G+
Sbjct: 747 PEMKKSR-----ISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGS 801
Query: 168 RRARTRRRTNEESSRLQS 185
+ + + RT SR S
Sbjct: 802 SQPKAKSRTPPRRSRSSS 819
Score = 42.7 bits (99), Expect = 2e-04
Identities = 58/218 (26%), Positives = 83/218 (38%), Gaps = 43/218 (19%)
Query: 4 SERRDRKGTLRPQGKNR-------------------HQKTPPQNRQKKTRVKSAAAR-RS 43
+ RRDR G+ + + R H ++P RQ+ +R S R RS
Sbjct: 1785 TRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPA--RQESSRTSSRRRRGRS 1842
Query: 44 RRLGESTAKPGARTGHSPPTR------PGRHRGGCAWTP--NQRPEAAAREARDAGRLRA 95
R S + +RT +P R P HR + TP ++R + R R+
Sbjct: 1843 RTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRS 1902
Query: 96 KRGGLREPERQRQEVSYRHRA---TLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQ 152
+ R R R R R+ T P RSR PT R R T PP + + +
Sbjct: 1903 RTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRT-PPVTRRRSRSR 1961
Query: 153 QPPPT-------PSPASQPRGARRAR--TRRRTNEESS 181
PP T SP ++ R R TRRR+ +S
Sbjct: 1962 TPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTS 1999
Score = 42.7 bits (99), Expect = 2e-04
Identities = 48/184 (26%), Positives = 66/184 (35%), Gaps = 12/184 (6%)
Query: 3 VSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
VS RR R T + +TP R+ ++R RRSR + +R+ SP
Sbjct: 1918 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPI 1977
Query: 63 TRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHP 122
T R R +P R + +R + R R R R R+ PP
Sbjct: 1978 T---RRRSRSRTSPVTRRRSRSRTSPVTRR--------RSRSRTSPVTRRRSRSRTPPAI 2026
Query: 123 LRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTP-SPASQPRGARRARTRRRTNEESS 181
R RS L R R + P A +R + P T S R R R + S
Sbjct: 2027 RRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSD 2086
Query: 182 RLQS 185
R +S
Sbjct: 2087 RSRS 2090
Score = 40.4 bits (93), Expect = 0.001
Identities = 48/174 (27%), Positives = 66/174 (37%), Gaps = 12/174 (6%)
Query: 4 SERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPT 63
+ RR R T + +T P +R++ S RRSR S A P +R T
Sbjct: 1872 THRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSR----SRASPVSRRRSRSRT 1927
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPL 123
P R + TP R + +R + +R R P R+ R T P
Sbjct: 1928 PPVTRRRSRSRTPTTRRRSRSR----TPPVTRRRSRSRTPPVTRRRSRSR---TSPITRR 1980
Query: 124 RSR-RSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRT 176
RSR R++P R R T P + R P S+ A R R+R RT
Sbjct: 1981 RSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRT 2034
Score = 39.7 bits (91), Expect = 0.002
Identities = 58/229 (25%), Positives = 81/229 (35%), Gaps = 44/229 (19%)
Query: 14 RPQGKNRHQKT---PPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP--------- 61
R G+ + K+ P R ++R A A+R R + K G SP
Sbjct: 462 RSHGRAKRDKSHSHTPSRRMGRSR-SPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQ 520
Query: 62 -------PTRPGRHRG----GCAWTPNQRPEAAAREAR----------DAGRLRAKRGGL 100
P R GR R G + + N + +R AR GR R++
Sbjct: 521 RWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPAR 580
Query: 101 REPERQRQEVSYRHRATLPPH-------PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQ 153
R R R R R+ P P R RS AR R T P +R +
Sbjct: 581 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP--VRRRSRSR 638
Query: 154 PPPTPSPASQPR-GARRARTRRRTNEESSRLQSQEGDGSGGKDEASSAA 201
P S S+ R ARR R+R RT R +S+ G+ + + A
Sbjct: 639 SPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPA 687
Score = 39.3 bits (90), Expect = 0.003
Identities = 53/220 (24%), Positives = 78/220 (35%), Gaps = 52/220 (23%)
Query: 3 VSERRDRKGTL-----RPQGKNRHQKTPPQNRQKKTRVKSAAARRSRR----LGESTAKP 53
+S RR R G+ +P+ R Q + + K A RRSR G +
Sbjct: 1591 LSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPE 1650
Query: 54 GARTGHSPPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYR 113
G+ + S P P + R A R +R + + K R P R+R S R
Sbjct: 1651 GSSSTESSPEHPPKSR------------TARRGSRSSPEPKTKS---RTPPRRR---SSR 1692
Query: 114 HRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTP--------------- 158
L SRRS + R PPR + P P
Sbjct: 1693 SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPR 1752
Query: 159 ---------SPASQPRGARRARTR-RRTNEESSRLQSQEG 188
SP+ +PRG +R+R+R RR ++R + + G
Sbjct: 1753 TKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSG 1792
Score = 38.9 bits (89), Expect = 0.003
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 26/178 (14%)
Query: 3 VSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
V+ RR R T + ++R + P R+ ++R RRSR + +R+ SP
Sbjct: 1930 VTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPV 1989
Query: 63 TRPG---------RHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGL--REPERQRQEVS 111
TR R R +P R + +R R R L R+ R R ++
Sbjct: 1990 TRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLA 2049
Query: 112 YRHRA--------------TLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPP 155
R R+ T P +R R ++ + R R T PP + G + PP
Sbjct: 2050 IRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSAT-PPATRNHSGSRTPP 2106
Score = 38.5 bits (88), Expect = 0.004
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Query: 23 KTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPG-----RHRGGCAWTPN 77
K PQ + ++R S+ ++ L + G+ + T R R G + +
Sbjct: 1487 KALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELD 1546
Query: 78 QRPEAAAREARDAGRLRAKRGGLREPERQRQ------EVSYRHRATLPPHPLRSRR-SAP 130
+P A+ +E ++ + R P RQR EV + R + P RSR S+P
Sbjct: 1547 VKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLS----PRRSRSGSSP 1602
Query: 131 TLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGAR---RARTRRRTNEESSRLQS 185
+ +PR PRAQ P P+P + PR +R ++ R + E SS +S
Sbjct: 1603 EVKDKPRAA---PRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTES 1657
Score = 37.7 bits (86), Expect = 0.007
Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 38/215 (17%)
Query: 6 RRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAAR-----RSRRLGESTAKPGARTGHS 60
RR R + P + R + P R ++R ++ A R R+ R G S ++ R G S
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 713
Query: 61 PPTRPGRH-RGGCAWTPNQRPEAAAREARD-------AGRLRAKRG-GLREPE-RQRQEV 110
P R R G + + + R +R R+ ++R L P + + +
Sbjct: 714 HSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRL 773
Query: 111 SYRH-----------RATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPP--- 156
S R ++ PP RS S P +R PPR R PPP
Sbjct: 774 SLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT-----PPRRS--RSSSSPPPKQK 826
Query: 157 --TPSPASQPRGARRARTRRRTNEESSRLQSQEGD 189
TPS S + + + T + S + +
Sbjct: 827 SKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQAN 861
Score = 37.0 bits (84), Expect = 0.013
Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 14/173 (8%)
Query: 6 RRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRP 65
+R R + +TP +R++ S +RR R S + +R+ SP +R
Sbjct: 1862 KRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSR- 1920
Query: 66 GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRS 125
R R ++ P R +R +R R P R+ R R+ PP R
Sbjct: 1921 RRSR-------SRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR----RSRSRTPPVTRRR 1969
Query: 126 RRS--APTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRT 176
RS +P R R T P + R P S+ R R+R RT
Sbjct: 1970 SRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRT 2022
Score = 36.6 bits (83), Expect = 0.017
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 30/206 (14%)
Query: 3 VSERRDRKGTLRPQGKNRHQKTPPQNRQK-----KTRVKSAAARRSRRLGESTAKPGART 57
++ +R+R G+ + +TP R + + VK +A+ + R ES + P ++
Sbjct: 1510 LTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQER--SESDSSPDSKA 1567
Query: 58 GHSPPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRAT 117
P R R R G + + + + R +R K P Q S
Sbjct: 1568 KTRTPLRQ-RSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKA 1626
Query: 118 LPPH--PLRSRRSAPTLGARPR---------RPTWPPRAQLKRGDQQPPPTP-------- 158
P P RSR + + G P P PP+++ R + P P
Sbjct: 1627 PAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPP 1686
Query: 159 ---SPASQPRGARRARTRRRTNEESS 181
S S P R+AR RR+ SS
Sbjct: 1687 RRRSSRSSPELTRKARLSRRSRSASS 1712
Score = 30.4 bits (67), Expect = 1.2
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 116 ATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRR 175
++LP P + + P+ PT P+ ++ G PP P+PA + R + + +
Sbjct: 2566 SSLPVQPEVALKRVPS-------PTPAPKEAVREGR---PPEPTPAKRKRRSSSSSSSSS 2615
Query: 176 TNEESSRLQSQEGDGSGGKDEASSAA 201
++ SS S S +SS++
Sbjct: 2616 SSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Score = 30.0 bits (66), Expect = 1.6
Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 37/212 (17%)
Query: 15 PQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTR---------- 64
P+ +R + + + + K + +RRSR S + PG R G P+R
Sbjct: 1411 PRTPSRERSSSASSPEMKDGLPRTPSRRSR----SGSSPGLRDGSGTPSRHSLSGSSPGM 1466
Query: 65 ------PGRHRGGCAWTPNQRPEAAAREARDAGRLRAK---RGGLREPERQRQ-EVSYRH 114
P R R C +P P+A + R R + P+R+R S
Sbjct: 1467 KDIPRTPSRGRSECDSSP--EPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVD 1524
Query: 115 RATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRR 174
+ T+ PL R + + +P+ P+ + + +P ++ R R R+R
Sbjct: 1525 QKTVARTPLGQRSRSGSSQELDVKPSASPQER-----SESDSSPDSKAKTRTPLRQRSRS 1579
Query: 175 RTNEE---SSRL---QSQEGDGSGGKDEASSA 200
++ E SRL +S+ G KD+ +A
Sbjct: 1580 GSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAA 1611
Score = 30.0 bits (66), Expect = 1.6
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 53 PGARTGHSP--PTRPGRHRGGCAWTPNQR----PEAAAREARDA----GRLRAKRGGLRE 102
PG R SP P R +++P +R P+ + R+ + + G R +RG R
Sbjct: 2670 PGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRS 2729
Query: 103 PERQRQEVSYRHRATLPPHPLRSRRS 128
P +R+ R T P P+R R S
Sbjct: 2730 PSHKRR------RETPSPRPMRHRSS 2749
Score = 29.6 bits (65), Expect = 2.0
Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 6/174 (3%)
Query: 2 TVSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
T +++ L+P + R + + + S+++ S S+ G+ P
Sbjct: 2513 TGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQP 2572
Query: 62 PTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPH 121
R +P P+ A RE R AKR S ++
Sbjct: 2573 EVALKR-----VPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSS 2627
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRR 175
S S+ + + + P + K G Q P SP P G RR+R+ R+
Sbjct: 2628 SSSSSSSSSSSSSSSSSSSSSP-SPAKPGPQALPKPASPKKPPPGERRSRSPRK 2680
Score = 28.5 bits (62), Expect = 4.5
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 3 VSERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPP 62
+ RD + + R P R +++ +RR +R G+S + R +P
Sbjct: 2682 IDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQR-GDSRSPSHKRRRETPS 2740
Query: 63 TRPGRHR 69
RP RHR
Sbjct: 2741 PRPMRHR 2747
Score = 28.1 bits (61), Expect = 5.9
Identities = 43/227 (18%), Positives = 77/227 (33%), Gaps = 47/227 (20%)
Query: 6 RRDRKGTLRPQGKNRHQKTPPQNRQK----KTRVKSAAARR--SRRLGESTAKPGARTGH 59
+R R T P+ + H+ T + ++R +SAAA+ + G S + R G
Sbjct: 246 KRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGE 305
Query: 60 --SPPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLR------------EPER 105
+P + PG +P + + D + + ++ R EP
Sbjct: 306 GDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPA 365
Query: 106 QRQEVSYRHRATLPP---HPLRSRRSAPTLGARPRRPTWPPRAQLK-------------- 148
++ RH + P PL P A P R PP++ K
Sbjct: 366 PTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSP 425
Query: 149 ----------RGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQS 185
+ P P P+P S + ++ R++ + R +S
Sbjct: 426 QPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKS 472
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 48.9 bits (115), Expect = 3e-06
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 8 DRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPGR 67
DR+ + + R Q + R+++ +SA R R + R + R G+
Sbjct: 352 DRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQ 411
Query: 68 HRGGCAWTPNQRPEAAAREA---RDAGRLRAKRGGL---REPERQRQEVSYRHRATLPPH 121
T QR RE+ R+ GR R K+ G RE + RQ R R+TL +
Sbjct: 412 RE-----TEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVN 466
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESS 181
P + + + P RPT R + D + T P +P A R R R E
Sbjct: 467 PPPRTARSGVVQSDPNRPTRGIRWKSSPEDPKAASTRFPWGRPAKASRGRVAGRRRWE-P 525
Query: 182 RLQSQEGDGSGGK 194
RL + G G G+
Sbjct: 526 RLGEKRGQGGEGR 538
Score = 34.3 bits (77), Expect = 0.083
Identities = 41/194 (21%), Positives = 65/194 (33%), Gaps = 8/194 (4%)
Query: 4 SERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP-P 62
+ER + R + K+RH+K +++ R K + R K R
Sbjct: 71 TERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERE 130
Query: 63 TRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHP 122
T RG T QR R+A + R R+ ER RQ+ R +
Sbjct: 131 TEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKN------ 184
Query: 123 LRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSR 182
R R T ++ R ++ T + + R R R R+R E
Sbjct: 185 -RQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERERE 243
Query: 183 LQSQEGDGSGGKDE 196
Q++ S + E
Sbjct: 244 KQAERERASERETE 257
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 48.1 bits (113), Expect = 6e-06
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 15/187 (8%)
Query: 7 RDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTR-- 64
R R+ P+G+ R +PP R++++ + RR R T P RT PP R
Sbjct: 534 RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRT---PTPPPRRRTPSPPPRRRS 590
Query: 65 --PGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHP 122
P R+ + P R A + + P+R+ VS+ P
Sbjct: 591 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR---VSHSPPPKQRSSP 647
Query: 123 LRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART----RRRTNE 178
+ RRS P+L ++ R+ + P R+ + QP SP+ +PR + + + RR +
Sbjct: 648 VTKRRS-PSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS 706
Query: 179 ESSRLQS 185
R QS
Sbjct: 707 SPQRRQS 713
Score = 44.3 bits (103), Expect = 8e-05
Identities = 48/187 (25%), Positives = 74/187 (39%), Gaps = 11/187 (5%)
Query: 2 TVSERRD-RKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGES-TAKPGARTGH 59
+V +RR R+ + + + R K++ VK+ R RR S +A P R
Sbjct: 478 SVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQ 537
Query: 60 SPPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLP 119
+ GR R +P+ P R A R +R P R+ R R+ P
Sbjct: 538 KETSPRGRRRR----SPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP 593
Query: 120 PH--PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRAR--TRRR 175
P RR +P+ + RR PP +R PPP + P +R+ T+RR
Sbjct: 594 RRYSPPIQRRYSPSPPPK-RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRR 652
Query: 176 TNEESSR 182
+ SS+
Sbjct: 653 SPSLSSK 659
Score = 38.5 bits (88), Expect = 0.004
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 6 RRDRKGTLRPQGKNR-----HQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHS 60
RR R+ + G + ++PP+ K+T S+ R++RRL S + P R S
Sbjct: 346 RRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRT---SSPPRKTRRLSPSASPPRRRHRPS 402
Query: 61 PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
PP P P R ++ + R R R + P R +V+ +H+ T
Sbjct: 403 PPATP---------PPKTRHSPTPQQ---SNRTRKSRVSV-SPGRTSGKVT-KHKGT--- 445
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEES 180
+R +P+ +PR + +L ++ + A ++ R RR N++S
Sbjct: 446 ----EKRESPSPAPKPR------KVELSESEEDKGGKMAAAD---SVQQRRQYRRQNQQS 492
Query: 181 SRLQSQEGDGSGGKDE 196
S S G S +DE
Sbjct: 493 S---SDSGSSSSSEDE 505
Score = 33.5 bits (75), Expect = 0.14
Identities = 44/200 (22%), Positives = 66/200 (33%), Gaps = 22/200 (11%)
Query: 7 RDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPG 66
R R +R + K H ++P + K+R S A + + E +P + P +
Sbjct: 183 RRRSSPVRRERKRSHSRSP--RHRTKSRSPSPAPEKKEKTPE-LPEPSVKV-KEPSVQEA 238
Query: 67 RHRGGCAWTPNQRPEAAAREARDA--GRLRAKRGGLREPERQRQEVSYRHRATLPPHPL- 123
P P +E + ++ R R R + R R+ P H
Sbjct: 239 TSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRP 298
Query: 124 ------RSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTN 177
RSR +P PRR P R R + PPP PR R RR
Sbjct: 299 RRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPR--RMPPP-------PRHRRSRSPVRRRR 349
Query: 178 EESSRLQSQEGDGSGGKDEA 197
S+ L S + +
Sbjct: 350 RSSASLSGSSSSSSSSRSRS 369
Score = 27.7 bits (60), Expect = 7.8
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 101 REPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPP 156
+E R+++E S R P RRS+P R R + PR + K P P
Sbjct: 159 KESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAP 214
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 47.0 bits (110), Expect = 1e-05
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 23/209 (11%)
Query: 7 RDRKGTLRPQGKNRHQKTP-----PQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
RD+ P R +++P P ++ + R A RR RR + +R+ S
Sbjct: 346 RDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRR---RRRRRRSRSSASA 402
Query: 62 PTRPGRHRGGCA-WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
P R GR R A + R + AR + D+G R G EP +R + RA P
Sbjct: 403 PRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERP 462
Query: 121 HPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTR------- 173
R ++P+ GA RR + K + P P P S R ++R+R
Sbjct: 463 PRARPASTSPSPGAHGRR----GGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPH 518
Query: 174 ---RRTNEESSRLQSQEGDGSGGKDEASS 199
R + + + ++G+G EA +
Sbjct: 519 SPSRSPSPKKPLSRDKDGEGRARHSEAEA 547
Score = 41.2 bits (95), Expect = 7e-04
Identities = 50/196 (25%), Positives = 73/196 (37%), Gaps = 27/196 (13%)
Query: 6 RRDRKGTLRPQGKNRHQ------KTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGH 59
RRDR + + K RH+ K +N++KK + RRS R ++ + + H
Sbjct: 210 RRDRSDS-GSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSH 268
Query: 60 -----SPPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQR---QEVS 111
SP +HR T +QR + + G G P+R Q
Sbjct: 269 YSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGG------SGWGSPQRNGGSGQRSG 322
Query: 112 YRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRA- 170
H + S+P+ R + P RG + P P +P+SQ RG R A
Sbjct: 323 AHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPA-RGKESPSPRSAPSSQGRGGRAAG 381
Query: 171 ----RTRRRTNEESSR 182
R RRR SR
Sbjct: 382 GAGRRRRRRRRRRRSR 397
Score = 29.6 bits (65), Expect = 2.0
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 10/146 (6%)
Query: 20 RHQKTPPQNRQKKTRVKSAA-ARRSRRLGESTAK-PGARTGHSPPTR-PGRHRGGCAWTP 76
R ++ PP+ R T A RR G+S+++ PG +R P + R A
Sbjct: 457 RAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSA--- 513
Query: 77 NQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARP 136
+RP + +R L + G E + R + P+R RR P
Sbjct: 514 EKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEP 573
Query: 137 RRPTWPPRAQLKRGDQQPPPTPSPAS 162
RR T + KR P+PS +S
Sbjct: 574 RRIT----SARKRPIPYYRPSPSSSS 595
Score = 28.1 bits (61), Expect = 5.9
Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 34/185 (18%)
Query: 24 TPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCAWTPNQRPEAA 83
+PP ++KK + +R+ RRL + G S P R + + +
Sbjct: 165 SPPPKKKKKKKGGHRRSRKKRRLESECS-----CGSSSPLRKKK----------KSVKKH 209
Query: 84 AREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRR----P 139
R+ D+G R +R R + +R+E +++ PH + G R R
Sbjct: 210 RRDRSDSGSRRKRRHRSRSSKCKRKE---KNKEKKRPH-------TESPGRRSHRHSSGS 259
Query: 140 TWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGS----GGKD 195
+ P D + P SP + G R+ ++R + S G GS GG
Sbjct: 260 SHSPSLSSHYSDSRSPSRLSPKHRDEG-RKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSG 318
Query: 196 EASSA 200
+ S A
Sbjct: 319 QRSGA 323
Score = 27.7 bits (60), Expect = 7.8
Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 11/152 (7%)
Query: 42 RSRRLGESTAKPGARTGHSPPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLR 101
R++ S+A P PP + + +GG + +R + + LR K+ ++
Sbjct: 155 RTKHWSSSSASP-------PPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVK 207
Query: 102 EPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKR--GDQQPPPTPS 159
+ R R + R + + +R + P R + G P S
Sbjct: 208 KHRRDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSS 267
Query: 160 PASQPRGARRARTRRRTNEESSRLQSQEGDGS 191
S R R + R +E + SQ GS
Sbjct: 268 HYSDSRSPSRLSPKHR--DEGRKTGSQRSSGS 297
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 47.0 bits (110), Expect = 1e-05
Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 12/204 (5%)
Query: 4 SERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPT 63
SERR R+ G+++ + + R + A+ RSR + S +
Sbjct: 194 SERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSS 253
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEV--SYRHRATLPPH 121
GR + A + + +++R+ RD+ R++ +EP +E +YR T P
Sbjct: 254 SGGRRKSASATSSS----SSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKT-EPK 308
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART----RRRTN 177
R RRS LG R P +Q R + P P S P R R+ RR +
Sbjct: 309 AYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPA-GGGSSPYSRRLPRSPSPYSRRRS 367
Query: 178 EESSRLQSQEGDGSGGKDEASSAA 201
SR S E G SS++
Sbjct: 368 PSYSRHSSYERGGDVSPSPYSSSS 391
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 47.0 bits (110), Expect = 1e-05
Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 12/204 (5%)
Query: 4 SERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPT 63
SERR R+ G+++ + + R + A+ RSR + S +
Sbjct: 194 SERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSS 253
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEV--SYRHRATLPPH 121
GR + A + + +++R+ RD+ R++ +EP +E +YR T P
Sbjct: 254 SGGRRKSASATSSS----SSSRKDRDSKAHRSRTKSSKEPPSAYKEPPKAYREDKT-EPK 308
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART----RRRTN 177
R RRS LG R P +Q R + P P S P R R+ RR +
Sbjct: 309 AYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPA-GGGSSPYSRRLPRSPSPYSRRRS 367
Query: 178 EESSRLQSQEGDGSGGKDEASSAA 201
SR S E G SS++
Sbjct: 368 PSYSRHSSYERGGDVSPSPYSSSS 391
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 46.6 bits (109), Expect = 2e-05
Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 25/211 (11%)
Query: 4 SERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPT 63
S RD + T+R + + +++ ++ R +S RRS + S P+
Sbjct: 1909 SSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPS 1968
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRH-----RATL 118
R R + TP++R +R +R R R R +R V R R
Sbjct: 1969 RRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRF 2028
Query: 119 PPHPLRSRRS-APTLGARPRRPTWPPRAQL-------------KRGDQQPP---PTPSPA 161
P+R +RS + G P+R T +AQL K G PP P P P
Sbjct: 2029 SRSPIRRKRSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPT 2088
Query: 162 SQPRGARR---ARTRRRTNEESSRLQSQEGD 189
+ + A++ A T + QS+E D
Sbjct: 2089 IEEKVAKKSGGATIEELTEKCKQIAQSKEDD 2119
Score = 42.4 bits (98), Expect = 3e-04
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 18 KNRHQKTPP-QNRQKKTRVK---SAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCA 73
K+ H+K+ +NR K + K S+ RS+R S K RT S R +
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLR---SRRSAP 130
R + +R R + R R+K G R +++++ S +HR+ + SR +
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 131 TLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART-------RRRTNEESSRL 183
T+ AR R P+ R+ TPS + R R R+ R RT SR
Sbjct: 1917 TVRARSRTPSRRSRSH----------TPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRT 1966
Query: 184 QSQ 186
S+
Sbjct: 1967 PSR 1969
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 46.6 bits (109), Expect = 2e-05
Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 25/211 (11%)
Query: 4 SERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPT 63
S RD + T+R + + +++ ++ R +S RRS + S P+
Sbjct: 1909 SSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPS 1968
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRH-----RATL 118
R R + TP++R +R +R R R R +R V R R
Sbjct: 1969 RRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRF 2028
Query: 119 PPHPLRSRRS-APTLGARPRRPTWPPRAQL-------------KRGDQQPP---PTPSPA 161
P+R +RS + G P+R T +AQL K G PP P P P
Sbjct: 2029 SRSPIRRKRSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPT 2088
Query: 162 SQPRGARR---ARTRRRTNEESSRLQSQEGD 189
+ + A++ A T + QS+E D
Sbjct: 2089 IEEKVAKKSGGATIEELTEKCKQIAQSKEDD 2119
Score = 42.4 bits (98), Expect = 3e-04
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 18 KNRHQKTPP-QNRQKKTRVK---SAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCA 73
K+ H+K+ +NR K + K S+ RS+R S K RT S R +
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLR---SRRSAP 130
R + +R R + R R+K G R +++++ S +HR+ + SR +
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 131 TLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRART-------RRRTNEESSRL 183
T+ AR R P+ R+ TPS + R R R+ R RT SR
Sbjct: 1917 TVRARSRTPSRRSRSH----------TPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRT 1966
Query: 184 QSQ 186
S+
Sbjct: 1967 PSR 1969
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 45.4 bits (106), Expect = 4e-05
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 120 PHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEE 179
P P RS P L A P P PP PPP P PA +PR R +R R R
Sbjct: 108 PQPRARSRSQPGLSAPPPPPARPP--------PPPPPPPPPAPRPRAWRGSRRRSRPGSR 159
Query: 180 SSRLQSQEGDGSGGKD 195
+S GD G D
Sbjct: 160 PQTRRSCSGDLDGSGD 175
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 45.1 bits (105), Expect = 5e-05
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 28/160 (17%)
Query: 15 PQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKP------GARTGHSPPTRPGRH 68
PQG N+ Q TPP K R +S R KP G PP PG+
Sbjct: 104 PQGGNQSQGTPPPPG-KPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKP 162
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
G P Q + + R+ R +P+ Q+ + + PP +
Sbjct: 163 EG----PPPQ----------EGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPG---KPQG 205
Query: 129 APTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGAR 168
P G P++P PP + Q PPP P PR A+
Sbjct: 206 PPPAGGNPQQPQAPPAGK----PQGPPPPPQGGRPPRPAQ 241
Score = 39.7 bits (91), Expect = 0.002
Identities = 44/188 (23%), Positives = 65/188 (34%), Gaps = 39/188 (20%)
Query: 14 RPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCA 73
RPQG N+ Q+ PP + + G PP PG+
Sbjct: 40 RPQGGNQPQRPPPPPGKP----------------QGPPPQGGNQSQGPPPPPGK------ 77
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLG 133
P RP +++ K PER + + + T PP P + R P G
Sbjct: 78 --PEGRPPQGGNQSQGPPPHPGK------PERPPPQGGNQSQGT-PPPPGKPERPPPQGG 128
Query: 134 ARPRRPTWPP----RAQLKRGDQQPPPTPSPAS----QPRGARRARTRRRTNEESSRLQS 185
+ RP PP R + G+Q P P P P+ ++R+ R +
Sbjct: 129 NQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQ 188
Query: 186 QEGDGSGG 193
QEG+ G
Sbjct: 189 QEGNKPQG 196
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 20/158 (12%)
Query: 15 PQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKP------GARTGHSPPTRPGRH 68
PQG N+ Q PP + K R +S+ KP G H PP PG+
Sbjct: 83 PQGGNQSQGPPP-HPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGK- 140
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
P + P +++ K G P+ + S R P P + +
Sbjct: 141 -------PERPPPQGGNQSQGPPPHPGKPEG-PPPQEGNKSRSARSPPGKPQGPPQQEGN 192
Query: 129 APTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRG 166
P P +P PP A G+ Q P P PA +P+G
Sbjct: 193 KPQGPPPPGKPQGPPPA---GGNPQQPQAP-PAGKPQG 226
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 45.1 bits (105), Expect = 5e-05
Identities = 43/160 (26%), Positives = 59/160 (36%), Gaps = 24/160 (15%)
Query: 15 PQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKP------GARTGHSPPTRPGRH 68
PQG N+ Q PP+ K +S+ KP G PP RPG+
Sbjct: 146 PQGGNQSQGPPPRPG-KPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKP 204
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
G NQ R + G +GG +P+ PPHP + +
Sbjct: 205 EGPPPQGGNQSQGPPPRPGKPEGP--PSQGG-NKPQGP------------PPHPGKPQGP 249
Query: 129 APTLGARPRRPTWP--PRAQLKRGDQQPPPTPSPASQPRG 166
P G +P+RP P P+ G P P PA +P+G
Sbjct: 250 PPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQG 289
Score = 38.9 bits (89), Expect = 0.003
Identities = 44/156 (28%), Positives = 55/156 (35%), Gaps = 14/156 (8%)
Query: 14 RPQGKNRHQKTPPQNRQKKTRVKSAAARRS---RRLGESTAKP--GARTGHSPPTRPGRH 68
RPQG N+ Q+TPP + + R + R G+ P G PP RPG+
Sbjct: 40 RPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 99
Query: 69 RGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRS 128
G NQ R + G +GG Q Q R P P +S
Sbjct: 100 EGQPPQGGNQSQGPPPRPGKPEG--PPPQGG-----NQSQGPPPRPGKPEGPPPQGGNQS 152
Query: 129 APTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQP 164
RP +P PP Q Q PPP P P
Sbjct: 153 QGP-PPRPGKPEGPP-PQGGNQSQGPPPHPGKPEGP 186
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 44.7 bits (104), Expect = 6e-05
Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 7/196 (3%)
Query: 14 RPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCA 73
RPQ + K P + QK + + ++ R G+ A GA+ H P R G
Sbjct: 134 RPQNRGGGDKKPRRRGQKAAKSRGGGGKKPR--GQKAAGAGAKK-HRKPRRRGERAAAAG 190
Query: 74 WTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLG 133
Q+ AAA ++R G + G ++P R+R + + + R R + + +
Sbjct: 191 GKKLQK--AAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVK 248
Query: 134 AR-PRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSG 192
+R ++P + Q +RG Q +P+ A A + R +++ G G
Sbjct: 249 SRGDKKPLRGGKKQRERG-QNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQN 307
Query: 193 GKDEASSAAITEYLLC 208
++E L C
Sbjct: 308 RRNEVGGQHNLALLEC 323
Score = 27.7 bits (60), Expect = 7.8
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 76 PNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGAR 135
P QR A A+ R + G +EP +R+E R P+ SR + +R
Sbjct: 79 PAQRRSMQATVAKAGSPGRGRLG--KEP--RRRESWTRSAPRRCPYQDASRAGSRVCRSR 134
Query: 136 PRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGKD 195
P+ + +RG + +PRG + A + + + R + + +GGK
Sbjct: 135 PQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRR-RGERAAAAGGKK 193
Query: 196 EASSAA 201
+AA
Sbjct: 194 LQKAAA 199
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 43.1 bits (100), Expect = 2e-04
Identities = 41/127 (32%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 52 KPGARTG--HSPPTRPGRHRGGCAWTPNQRPEAAAREARDA-----GRLRAKRGGLR-EP 103
+PG G H PP H G C + P AA R GR RA G P
Sbjct: 47 RPGEEPGNRHPPPPAARTHPGSCR---ARCPSPAAGGLRGPWTAAPGRQRADEGAAAARP 103
Query: 104 ERQRQEVSYRHRATLPPHPLRSR-RSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPAS 162
ERQR + P P R R P P RP PP PP+P+PA
Sbjct: 104 ERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPSPAPAP 163
Query: 163 QPRGARR 169
+ R A R
Sbjct: 164 RSRPAPR 170
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 43.1 bits (100), Expect = 2e-04
Identities = 48/186 (25%), Positives = 71/186 (38%), Gaps = 26/186 (13%)
Query: 16 QGKNRHQKTPPQNRQKKTRV-KSAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCAW 74
QG Q+ PPQ +Q + + A + +RL T+ P + P G+ R
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR----- 531
Query: 75 TPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGA 134
RP A A A R A P QRQ P +R+++ + A
Sbjct: 532 --QSRPVAGGPGAPPAARPPAS------PSPQRQAGP----------PQATRQTSVSGPA 573
Query: 135 RPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGK 194
P+ PP Q ++G Q P P PA R A +A RT +++ G G G+
Sbjct: 574 PPKASGAPPGGQQRQGPPQKP--PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGR 631
Query: 195 DEASSA 200
+ A
Sbjct: 632 PKPQLA 637
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 43.1 bits (100), Expect = 2e-04
Identities = 48/186 (25%), Positives = 71/186 (38%), Gaps = 26/186 (13%)
Query: 16 QGKNRHQKTPPQNRQKKTRV-KSAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCAW 74
QG Q+ PPQ +Q + + A + +RL T+ P + P G+ R
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR----- 531
Query: 75 TPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGA 134
RP A A A R A P QRQ P +R+++ + A
Sbjct: 532 --QSRPVAGGPGAPPAARPPAS------PSPQRQAGP----------PQATRQTSVSGPA 573
Query: 135 RPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGK 194
P+ PP Q ++G Q P P PA R A +A RT +++ G G G+
Sbjct: 574 PPKASGAPPGGQQRQGPPQKP--PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGR 631
Query: 195 DEASSA 200
+ A
Sbjct: 632 PKPQLA 637
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 41.6 bits (96), Expect = 5e-04
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 66 GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLP---PHP 122
G HR C P +P A+EA+ R P + + R+ T P P P
Sbjct: 819 GPHRSHCCSQPGTQP---AQEAQ------------RGPSPEASWLCGRYCPTPPRGRPCP 863
Query: 123 LRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEE--S 180
R S + G+ + P + G +QP PTPSP +RR+ + S
Sbjct: 864 QRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRGLS 923
Query: 181 SRLQSQEGDGSGGKDEASSAA 201
+ G G G++EAS +
Sbjct: 924 EEKTLRSGGGPQGQEEASGVS 944
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 40.4 bits (93), Expect = 0.001
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 43/206 (20%)
Query: 17 GKNRHQKTPPQNRQKKTRV-KSAAARRSRRLGESTA--KPGA--RTGHSPPTRPGRH--- 68
GK+R K+ +K R ++AA ++R G +TA KP A R G P + G++
Sbjct: 259 GKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRW 318
Query: 69 -RGGCAWTPNQRPEAAAREARDAGRLRAKRGG------------LREPERQRQEVSYRHR 115
RGG ++P ++A A KRGG R+ +R+R + R +
Sbjct: 319 GRGG------KKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQK 372
Query: 116 ATLPPHPLRSR------RSAPTLGARPRRPTWP-PRAQLKRGDQQPPPTPSPASQPRGAR 168
A+ R R A G ++P W PR + ++ +PA++PRG
Sbjct: 373 ASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQK---------APAAKPRGGG 423
Query: 169 RARTRRRTNEESSRLQSQEGDGSGGK 194
+ RRR + + + G G K
Sbjct: 424 SKKPRRRGPKAAKSRGGKSRSGGGKK 449
Score = 37.0 bits (84), Expect = 0.013
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 8 DRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPGR 67
D+KG LR + + P+ + + R + A A + R G + KP R + +R G+
Sbjct: 385 DKKG-LREAKRRGDGRKKPRWQNPRRRAQKAPAAKPR--GGGSKKPRRRGPKAAKSRGGK 441
Query: 68 HRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHR-ATLPPHPLRS- 125
R G P +R + A ++A +AG RG ++ ++ + R L H ++
Sbjct: 442 SRSGGGKKPRRRGQKARQKAAEAG--AESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNL 499
Query: 126 -RRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRR-------TN 177
RR A + +++ ++ ++ P + A G ++R R++ ++
Sbjct: 500 WRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSH 559
Query: 178 EESSRLQSQEGDGSGGKDEASSAA 201
QS+ G G+ + +AA
Sbjct: 560 GGGGNKQSRGGGGNKPRQWGQTAA 583
Score = 34.7 bits (78), Expect = 0.063
Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 27/187 (14%)
Query: 36 KSAAARRSRRLGESTAKPGARTG---------HSPPTRPGRHRGGCAWTPNQRPEAAARE 86
K+AAA R G+ + GA++ +R G+ RGG ++RP+ AA
Sbjct: 176 KAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRR-KKHRRPKPAA-- 232
Query: 87 ARDAGRLRAKRGGLREPERQRQEVSY----------RHRATLPPHPLRSRRSAPTLGARP 136
G +++RGG ++P++QR+ + R R ++A GA+
Sbjct: 233 ----GGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKR 288
Query: 137 RRPTWPPRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQ-EGDGSGGKD 195
R +G P PR R + RR +++++ + G GG+
Sbjct: 289 RGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQ 348
Query: 196 EASSAAI 202
+A+ +
Sbjct: 349 KAAVVGV 355
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/202 (27%), Positives = 71/202 (35%), Gaps = 29/202 (14%)
Query: 19 NRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTR----PGRHRGGCAW 74
NR+ P + ++ R RR E +P + SP R PGR R G A
Sbjct: 199 NRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAAL 258
Query: 75 TPNQRP-EAAAR-------EARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSR 126
T Q EAAAR G A+ GG +R E R P
Sbjct: 259 TEEQAAGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEF----RVAGPRGVAEEA 314
Query: 127 RSAPTLGARPRRPTWPPRAQLKRGDQQPPPT------PSPASQPRGARRARTRR-RTNEE 179
S G R +WP + + G + P P +P PR ARRA R RT+
Sbjct: 315 ESGR--GWR----SWPSFSAVSGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSAR 368
Query: 180 SSRLQSQEGDGSGGKDEASSAA 201
+ GDG G + A
Sbjct: 369 GLGPGDRRGDGRFGGGRGAEGA 390
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/202 (27%), Positives = 71/202 (35%), Gaps = 29/202 (14%)
Query: 19 NRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTR----PGRHRGGCAW 74
NR+ P + ++ R RR E +P + SP R PGR R G A
Sbjct: 199 NRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAAL 258
Query: 75 TPNQRP-EAAAR-------EARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSR 126
T Q EAAAR G A+ GG +R E R P
Sbjct: 259 TEEQAAGEAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEF----RVAGPRGVAEEA 314
Query: 127 RSAPTLGARPRRPTWPPRAQLKRGDQQPPPT------PSPASQPRGARRARTRR-RTNEE 179
S G R +WP + + G + P P +P PR ARRA R RT+
Sbjct: 315 ESGR--GWR----SWPSFSAVSGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSAR 368
Query: 180 SSRLQSQEGDGSGGKDEASSAA 201
+ GDG G + A
Sbjct: 369 GLGPGDRRGDGRFGGGRGAEGA 390
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 40.4 bits (93), Expect = 0.001
Identities = 53/215 (24%), Positives = 78/215 (36%), Gaps = 37/215 (17%)
Query: 4 SERRDRKGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPT 63
S RR + R + R ++ + R R +S RR RR +A P T S +
Sbjct: 569 SARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRR---RSASPPPATSSSSSS 625
Query: 64 RPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPL 123
R RHRG + RD G + K+ R +R +A P P
Sbjct: 626 RRERHRG---------------KHRDGGGSKKKKKRSRSRGEKRSGDG-SEKAPAPAPPP 669
Query: 124 RSRRSAPTLGARPRRPTWPPRAQ---------------LKRGDQQPP--PTPSPASQPRG 166
S +R RR PP Q + R D+ P P+P+PAS P+
Sbjct: 670 SGSTSCGDRDSR-RRGAVPPSIQDLTDHDLFAIKRTITVGRLDKSDPRGPSPAPASSPKR 728
Query: 167 ARRARTRRRTNEESSRLQSQEGDGSGGKDEASSAA 201
+ + EE SQ+ G +SS++
Sbjct: 729 EVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSS 763
Score = 35.8 bits (81), Expect = 0.028
Identities = 39/172 (22%), Positives = 59/172 (34%), Gaps = 31/172 (18%)
Query: 26 PQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCAWTPNQRPEAAAR 85
P R+K R + + S+ A + P +HR + +A R
Sbjct: 513 PPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARR 572
Query: 86 EARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRA 145
+R R R+ R R +R+R SRRS R RR
Sbjct: 573 RSRSRSRSRSTRRRSRSTDRRRG---------------GSRRSRSREKRRRRR------- 610
Query: 146 QLKRGDQQPPPTPSPASQPRGARRAR------TRRRTNEESSRLQSQEGDGS 191
R PP T S +S R R + ++++ SR + + GDGS
Sbjct: 611 ---RSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDGS 659
Score = 31.2 bits (69), Expect = 0.70
Identities = 42/203 (20%), Positives = 69/203 (33%), Gaps = 26/203 (12%)
Query: 5 ERRDRKGTLRPQGK---NRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
+R R L+P + + P + KKT+VK+ A + + + KP S
Sbjct: 869 DRESRSPFLKPDERAPTEMAKAAPGSTKPKKTKVKAKAGAKKTKGTKGKTKP------SK 922
Query: 62 PTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPH 121
+ R GG + Q + + D+ A G E +E + + +T PP
Sbjct: 923 TRKKVRSGGGSGGSGGQ--VSLKKSKADSCSQAAGTKGAEETSWSGEERAAKVPSTPPPK 980
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPT---PSPASQPRGARRARTRRRTNE 178
A P P P +Q + P P A++ G R E
Sbjct: 981 ------------AAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEE 1028
Query: 179 ESSRLQSQEGDGSGGKDEASSAA 201
E + +E + A+S A
Sbjct: 1029 EEEEEEEEEEEQQPATTTATSTA 1051
Score = 30.4 bits (67), Expect = 1.2
Identities = 34/124 (27%), Positives = 47/124 (37%), Gaps = 24/124 (19%)
Query: 98 GGL---REPERQRQEVSYRHRATLP-PHPLRSRRSAPTLGARPRRPTW-----PPRAQLK 148
GGL R+ QR+E YR R+ P P P + + P + RR A
Sbjct: 478 GGLDLRRKILTQRRE-RYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSS 536
Query: 149 RGDQQPPPTPS--------------PASQPRGARRARTRRRTNEESSRLQSQEGDGSGGK 194
G Q PP P+ P S + R R+R R+ S+R +S+ D G
Sbjct: 537 SGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGG 596
Query: 195 DEAS 198
S
Sbjct: 597 SRRS 600
>gi|4758410 fragile X mental retardation syndrome related protein 2
[Homo sapiens]
Length = 673
Score = 40.4 bits (93), Expect = 0.001
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 66 GRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGG-------LREPERQRQEVSYRHRATL 118
GR GG A+ P+ A+ E R R G R E +R+ R R
Sbjct: 435 GRRTGGPAYGPSSDVSTAS-ETESEKREEPNRAGPGDRDPPTRGEESRRRPTGGRGRGPP 493
Query: 119 PPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPPTPSPASQP-RGARRARTRRRTN 177
P SR ++ ++ + + P P + L + +PP P P ARR R+RRR
Sbjct: 494 PAPRPTSRYNSSSISSVLKDPDSNPYSLLDTSEPEPPVDSEPGEPPPASARRRRSRRRRT 553
Query: 178 EESSRLQ--SQEGDG 190
+E + E DG
Sbjct: 554 DEDRTVMDGGLESDG 568
>gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo
sapiens]
Length = 267
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 49 STAKPGARTGHSPPTRPGRHRGGCAWTPNQ----RPEAAAREARDAGRLRA---KRGGLR 101
+T P R R GR G + T + + AAA A AG+ A RGG+
Sbjct: 92 ATGPPQDRAARGCELREGRAEAGHSSTSQKDTLSKGSAAAATAVAAGKHLAVPETRGGV- 150
Query: 102 EPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPR---RPTWPPRAQLK---RGDQQPP 155
P R+R+ + PP P R+R G RP R + P + R Q+P
Sbjct: 151 -PARRRETAN-------PPGPGRARPGGSPFGHRPLLQPRQIFAPLQAITNQVRPQQRPE 202
Query: 156 PTPSPASQPRGARRARTRRRTNEESSRLQSQE 187
P P+ ++ G R R R+ + +S+ +S E
Sbjct: 203 PPPAGSAARSGRRAQRPGRKRSPQSAPAESGE 234
>gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo
sapiens]
Length = 248
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 49 STAKPGARTGHSPPTRPGRHRGGCAWTPNQ----RPEAAAREARDAGRLRA---KRGGLR 101
+T P R R GR G + T + + AAA A AG+ A RGG+
Sbjct: 73 ATGPPQDRAARGCELREGRAEAGHSSTSQKDTLSKGSAAAATAVAAGKHLAVPETRGGV- 131
Query: 102 EPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPR---RPTWPPRAQLK---RGDQQPP 155
P R+R+ + PP P R+R G RP R + P + R Q+P
Sbjct: 132 -PARRRETAN-------PPGPGRARPGGSPFGHRPLLQPRQIFAPLQAITNQVRPQQRPE 183
Query: 156 PTPSPASQPRGARRARTRRRTNEESSRLQSQE 187
P P+ ++ G R R R+ + +S+ +S E
Sbjct: 184 PPPAGSAARSGRRAQRPGRKRSPQSAPAESGE 215
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 39.7 bits (91), Expect = 0.002
Identities = 47/169 (27%), Positives = 57/169 (33%), Gaps = 39/169 (23%)
Query: 13 LRPQGKNRHQKTP-----------PQNRQKKTRVKSAAARRSRRLGESTA-KPGARTGHS 60
LRP R + P P R R + A G + A +PG G S
Sbjct: 94 LRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGGRS 153
Query: 61 PPTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPP 120
P PG RGG P R AAA D GR P+R + R A PP
Sbjct: 154 HPGGPGSPRGGGTVGPGDRGPAAA----DGGR----------PQRTVRAAETRGAAAAPP 199
Query: 121 ----HPLRSRRSAPTLGARPRRP---------TWPPRAQLKRGDQQPPP 156
P++S P L P+ P T P + G PPP
Sbjct: 200 LTLEGPVQSHHGTPALTQGPQSPRDGAQLGACTRPVDVRDSGGRPLPPP 248
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 39.7 bits (91), Expect = 0.002
Identities = 47/184 (25%), Positives = 70/184 (38%), Gaps = 39/184 (21%)
Query: 14 RPQGKNRHQKTPPQNRQKKTRVKSAAAR-------RSRRLGESTAKPGARTGHSPPTRPG 66
+P+ K+R ++P N ++ + KS + +SR L +P R SP TRP
Sbjct: 358 KPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTRP- 416
Query: 67 RHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSR 126
R + +R R R P R+R R R+ PLR
Sbjct: 417 ------------RDDILSRRERSKDASPINRWS---PTRRRSRSPIRRRSR---SPLRRS 458
Query: 127 RSAPTLGARPRRPTWP--PRAQLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQ 184
RS PRR R++L+R S+ RG RR R+R + E+ +
Sbjct: 459 RSPRRRSRSPRRRDRGRRSRSRLRR-----------RSRSRGGRRRRSRSKVKEDKFKGS 507
Query: 185 SQEG 188
EG
Sbjct: 508 LSEG 511
Score = 34.3 bits (77), Expect = 0.083
Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 10/191 (5%)
Query: 3 VSERRDR-KGTLRPQGKNRHQKTPPQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSP 61
V E+ R K R + K+ +++ Q++ +K++ + R ++G++ + +
Sbjct: 208 VKEKTTRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPTDDKVKIED 267
Query: 62 PTRPGRHRGGCAWTPNQRPEAAAREARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPH 121
++ + R R +++R LR K R ++R+ S R
Sbjct: 268 KSK-SKDRKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERK--SKRSETDKEKK 324
Query: 122 PLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPP------TPSPASQPRGARRARTRRR 175
P++S + G R P+ P KR P P + SP R ++++++ R
Sbjct: 325 PIKSPSKDASSGKENRSPSRRPGRSPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSR 384
Query: 176 TNEESSRLQSQ 186
T R +S+
Sbjct: 385 TLSPGRRAKSR 395
>gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens]
Length = 970
Score = 39.7 bits (91), Expect = 0.002
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 88 RDAGRLRAKRGGLREPERQRQE--------VSYRHRATLPPHPLR--SRRSAPTLGARPR 137
+D K+ L E RQ+QE R +A L PL +R S RP+
Sbjct: 490 KDMKTQEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQ 549
Query: 138 RPTWPPR-AQLKRGDQQPP--PTPSPASQPRGA 167
RP PP A ++ +PP PTP PASQPR A
Sbjct: 550 RPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKA 582
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 39.7 bits (91), Expect = 0.002
Identities = 44/180 (24%), Positives = 59/180 (32%), Gaps = 18/180 (10%)
Query: 26 PQNRQKKTRVKSAAARRSRRLGESTAKPGARTGHSPPTRPGRHRGGCAWTPNQRPEAAAR 85
P+ K+ A ++ S RLG A G P GR R C+ P P
Sbjct: 22 PKAEGDKSGSAGAPSKNSSRLGGRPCMCTA--GRRPNRASGRRRRSCSPAPTWPPLCCYP 79
Query: 86 EARDAGRLRAKRGGLREPERQRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRA 145
++R +R R PH + +AP RPRRP P
Sbjct: 80 QSRPTASAAGPGACMRASGR--------------PHGNTTASTAPPRHPRPRRPGGPALR 125
Query: 146 QLKRGDQQPPPTPSPASQPRGARRARTRRRTNEESSRLQSQEGDGSGGKDEASSAAITEY 205
R P P PAS+ RR R R R + + +G A A + Y
Sbjct: 126 PTPR--PCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAAWSARGAPLCSY 183
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,937,513
Number of Sequences: 37866
Number of extensions: 653184
Number of successful extensions: 7201
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 840
Number of HSP's that attempted gapping in prelim test: 5484
Number of HSP's gapped (non-prelim): 2225
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.