Guide to the Human Genome
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Search of human proteins with 169165476

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169165476 PREDICTED: similar to high-mobility group box 2
[Homo sapiens]
         (91 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169165476 PREDICTED: similar to high-mobility group box 2 [Ho...   193   2e-50
gi|239748075 PREDICTED: similar to high-mobility group box 2 [Ho...   193   2e-50
gi|239741972 PREDICTED: similar to high-mobility group box 2 [Ho...   191   8e-50
gi|71143137 high-mobility group box 3 [Homo sapiens]                   82   7e-17
gi|169212060 PREDICTED: high mobility group protein B3-like prot...    75   1e-14
gi|239745831 PREDICTED: high mobility group protein B3-like prot...    75   1e-14
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]           72   1e-13
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]           72   1e-13
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...    72   1e-13
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...    68   1e-12
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...    68   1e-12
gi|194688135 high-mobility group box 2 [Homo sapiens]                  68   2e-12
gi|194688133 high-mobility group box 2 [Homo sapiens]                  68   2e-12
gi|11321591 high-mobility group box 2 [Homo sapiens]                   68   2e-12
gi|4504425 high-mobility group box 1 [Homo sapiens]                    66   7e-12
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...    64   2e-11
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...    64   2e-11
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...    64   2e-11
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...    64   2e-11
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]            61   2e-10
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]             37   0.003
gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens]           27   4.6  
gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo ...    27   4.6  
gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo ...    27   4.6  
gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]            26   6.1  

>gi|169165476 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score =  193 bits (491), Expect = 2e-50
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60
          MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60

Query: 61 KSQRWVKDADWEMKDYDPAKGHKKKKVRKAC 91
          KSQRWVKDADWEMKDYDPAKGHKKKKVRKAC
Sbjct: 61 KSQRWVKDADWEMKDYDPAKGHKKKKVRKAC 91


>gi|239748075 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score =  193 bits (491), Expect = 2e-50
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60
          MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60

Query: 61 KSQRWVKDADWEMKDYDPAKGHKKKKVRKAC 91
          KSQRWVKDADWEMKDYDPAKGHKKKKVRKAC
Sbjct: 61 KSQRWVKDADWEMKDYDPAKGHKKKKVRKAC 91


>gi|239741972 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score =  191 bits (486), Expect = 8e-50
 Identities = 90/91 (98%), Positives = 90/91 (98%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60
          MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60

Query: 61 KSQRWVKDADWEMKDYDPAKGHKKKKVRKAC 91
          KSQRWVKDADWEMKDYDPAKGHKKKKV KAC
Sbjct: 61 KSQRWVKDADWEMKDYDPAKGHKKKKVHKAC 91


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score = 82.4 bits (202), Expect = 7e-17
 Identities = 48/88 (54%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59
          MAKGD + PKGKMSA  FFV+TCREEHKK  P+ PV+F    K    R +   GKEK   
Sbjct: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60

Query: 60 IKSQRWVK-DADWEMKDYDPAKGHKKKK 86
           +  +  K   D EMKDY PAKG KKKK
Sbjct: 61 DEMAKADKVRYDREMKDYGPAKGGKKKK 88


>gi|169212060 PREDICTED: high mobility group protein B3-like
          protein-like [Homo sapiens]
          Length = 207

 Score = 74.7 bits (182), Expect = 1e-14
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59
          MAKGD + PKGKMSA  FFV+TCREEHKK  P  P++F    K    R +    KEK   
Sbjct: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85
           +  +  K   D E+KDY PAKG KKK
Sbjct: 61 NELAKADKVHYDQEIKDYGPAKGGKKK 87


>gi|239745831 PREDICTED: high mobility group protein B3-like
          protein-like [Homo sapiens]
          Length = 207

 Score = 74.7 bits (182), Expect = 1e-14
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59
          MAKGD + PKGKMSA  FFV+TCREEHKK  P  P++F    K    R +    KEK   
Sbjct: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85
           +  +  K   D E+KDY PAKG KKK
Sbjct: 61 NELAKADKVHYDQEIKDYGPAKGGKKK 87


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score = 72.0 bits (175), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQF-GKEKINL 59
          MA+GD + PKGKMSA  FF +TCREEHKK  P+ PV+F+   K      +   GKEK   
Sbjct: 1  MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85
           +  +  K   D EMKD  P +G KKK
Sbjct: 61 DEMAKVDKVHYDQEMKDNGPVEGGKKK 87


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score = 72.0 bits (175), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQF-GKEKINL 59
          MA+GD + PKGKMSA  FF +TCREEHKK  P+ PV+F+   K      +   GKEK   
Sbjct: 1  MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85
           +  +  K   D EMKD  P +G KKK
Sbjct: 61 DEMAKVDKVHYDQEMKDNGPVEGGKKK 87


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
          sapiens]
          Length = 201

 Score = 72.0 bits (175), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQF-GKEKINL 59
          MA+GD + PKGKMSA  FF +TCREEHKK  P+ PV+F+   K      +   GKEK   
Sbjct: 1  MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85
           +  +  K   D EMKD  P +G KKK
Sbjct: 61 DEMAKVDKVHYDQEMKDNGPVEGGKKK 87


>gi|113421073 PREDICTED: similar to high mobility group box 3
          [Homo sapiens]
          Length = 208

 Score = 68.2 bits (165), Expect = 1e-12
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59
          MAKGD + P+GKMSA  F V+TC +EHKK  P+ PV+F    K    R +    KEK   
Sbjct: 1  MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 60 IKSQRWVKDA-DWEMKDYDPAKGHKKK 85
           +  +  +   D EMKDY PAKG KKK
Sbjct: 61 GEMAKADEVCYDREMKDYGPAKGGKKK 87


>gi|113420668 PREDICTED: similar to high mobility group box 3
          [Homo sapiens]
          Length = 208

 Score = 68.2 bits (165), Expect = 1e-12
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59
          MAKGD + P+GKMSA  F V+TC +EHKK  P+ PV+F    K    R +    KEK   
Sbjct: 1  MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 60 IKSQRWVKDA-DWEMKDYDPAKGHKKK 85
           +  +  +   D EMKDY PAKG KKK
Sbjct: 61 GEMAKADEVCYDREMKDYGPAKGGKKK 87


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKI-- 57
          M KGD   P+GKMS+  FFV+TCREEHKK  PD  V+F    K    R +    KEK   
Sbjct: 1  MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 58 -NLIKSQRWVKDADWEMKDYDPAKGHKKKK 86
           ++ KS +     D EMK+Y P KG KK K
Sbjct: 61 EDMAKSDK--ARYDREMKNYVPPKGDKKGK 88


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKI-- 57
          M KGD   P+GKMS+  FFV+TCREEHKK  PD  V+F    K    R +    KEK   
Sbjct: 1  MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 58 -NLIKSQRWVKDADWEMKDYDPAKGHKKKK 86
           ++ KS +     D EMK+Y P KG KK K
Sbjct: 61 EDMAKSDK--ARYDREMKNYVPPKGDKKGK 88


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKI-- 57
          M KGD   P+GKMS+  FFV+TCREEHKK  PD  V+F    K    R +    KEK   
Sbjct: 1  MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 58 -NLIKSQRWVKDADWEMKDYDPAKGHKKKK 86
           ++ KS +     D EMK+Y P KG KK K
Sbjct: 61 EDMAKSDK--ARYDREMKNYVPPKGDKKGK 88


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score = 65.9 bits (159), Expect = 7e-12
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59
          M KGD + P+GKMS+  FFV+TCREEHKK  PD  V+F    K    R +    KEK   
Sbjct: 1  MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60

Query: 60 IKSQRWVKDA-DWEMKDYDPAKGHKKKKVR 88
              +  K   + EMK Y P KG  KKK +
Sbjct: 61 EDMAKADKARYEREMKTYIPPKGETKKKFK 90


>gi|169184027 PREDICTED: similar to high mobility group box 3
          [Homo sapiens]
          Length = 208

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59
          MAKGD + P+GKMSA  F V+TC +EHKK  P+  V+F    K    R +    KEK   
Sbjct: 1  MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 60 IKSQRWVKDA-DWEMKDYDPAKGHKKK 85
           +  +  +   D EMKDY PAKG KKK
Sbjct: 61 GEMAKADEVCYDREMKDYGPAKGGKKK 87


>gi|169168462 PREDICTED: similar to high mobility group box 3
          [Homo sapiens]
          Length = 204

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 44/87 (50%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60
          MAKGD + PKGKMSA VFFV+TCREE KK  P     F +  K   R +   GKEK    
Sbjct: 1  MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSK--KCSERWKTMSGKEKSKFD 58

Query: 61 KSQRWVK-DADWEMKDYDPAKGHKKKK 86
          +  +  K   D EMK   PAKG KKKK
Sbjct: 59 EMAKTDKVHCDREMK--GPAKGGKKKK 83


>gi|169168166 PREDICTED: similar to high mobility group box 3
          [Homo sapiens]
          Length = 204

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 44/87 (50%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60
          MAKGD + PKGKMSA VFFV+TCREE KK  P     F +  K   R +   GKEK    
Sbjct: 1  MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSK--KCSERWKTMSGKEKSKFD 58

Query: 61 KSQRWVK-DADWEMKDYDPAKGHKKKK 86
          +  +  K   D EMK   PAKG KKKK
Sbjct: 59 EMAKTDKVHCDREMK--GPAKGGKKKK 83


>gi|113416897 PREDICTED: similar to high mobility group box 3
          isoform 1 [Homo sapiens]
          Length = 201

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 44/87 (50%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLI 60
          MAKGD + PKGKMSA VFFV+TCREE KK  P     F +  K   R +   GKEK    
Sbjct: 1  MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSK--KCSERWKTMSGKEKSKFD 58

Query: 61 KSQRWVK-DADWEMKDYDPAKGHKKKK 86
          +  +  K   D EMK   PAKG KKKK
Sbjct: 59 EMAKTDKVHCDREMK--GPAKGGKKKK 83


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score = 60.8 bits (146), Expect = 2e-10
 Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIF-KSYLRGERQFGKEK--- 56
          M KGD + P+GKMS+  FFV+TCREEHKK   D  V+F     K   R +    KEK   
Sbjct: 1  MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60

Query: 57 INLIKSQRWVKDADWEMKDYDPAKGHKKKKVR 88
           ++ K+ +     + +MK Y P KG  KKK +
Sbjct: 61 EDMAKADK--THYERQMKTYIPPKGETKKKFK 90


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 30/77 (38%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 14  SANVFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQ-FGKEKINLIKSQRWVK-DADW 71
           S N   V  C EEHKK  PD  V F    K      +  F KEK       +  K   + 
Sbjct: 689 SHNNTLVDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYER 747

Query: 72  EMKDYDPAKGHKKKKVR 88
           EMK Y P KG KKKK +
Sbjct: 748 EMKTYIPPKGEKKKKFK 764


>gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens]
          Length = 225

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 17  VFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLIKSQRWVKDADWEMKDY 76
           V  V+   E+H K       S++ + +   +G R + + K+  +K +  +K  + ++KDY
Sbjct: 146 VALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKN-LKRMEGKVKDY 204

Query: 77  D 77
           +
Sbjct: 205 E 205


>gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo
           sapiens]
          Length = 505

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 17  VFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLIKSQRWVKDADWEMKDY 76
           V  V+   E+H K       S++ + +   +G R + + K+  +K +  +K  + ++KDY
Sbjct: 426 VALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKN-LKRMEGKVKDY 484

Query: 77  D 77
           +
Sbjct: 485 E 485


>gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo
           sapiens]
          Length = 456

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 17  VFFVKTCREEHKKLKPDGPVSFLRIFKSYLRGERQFGKEKINLIKSQRWVKDADWEMKDY 76
           V  V+   E+H K       S++ + +   +G R + + K+  +K +  +K  + ++KDY
Sbjct: 377 VALVRKLEEKHPKASAQRNKSYMPVGRQRGKGRRYWSRRKLPWVKVKN-LKRMEGKVKDY 435

Query: 77  D 77
           +
Sbjct: 436 E 436


>gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]
          Length = 2419

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 63  QRWVKDADWEMKDYDPAKG 81
           QRW++D +W++   D  KG
Sbjct: 700 QRWLEDVEWQVTSEDYGKG 718


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,830,000
Number of Sequences: 37866
Number of extensions: 148753
Number of successful extensions: 389
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 352
Number of HSP's gapped (non-prelim): 25
length of query: 91
length of database: 18,247,518
effective HSP length: 62
effective length of query: 29
effective length of database: 15,899,826
effective search space: 461094954
effective search space used: 461094954
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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