| Name: LOC100288976 | Sequence: fasta or formatted (456aa) | NCBI GI: 239744313 | |
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Description: PREDICTED: hypothetical protein XP_002343115
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.6 21 1 C cysteine 0.7 3 1 D aspartate 3.3 15 2 E glutamate 7.9 36 2 F phenylalanine 2.6 12 1 G glycine 7.0 32 2 H histidine 3.1 14 2 I isoleucine 4.8 22 1 K lysine 8.6 39 2 L leucine 11.2 51 3 M methionine 2.2 10 2 N asparagine 4.4 20 1 P proline 4.2 19 2 Q glutamine 5.9 27 1 R arginine 5.5 25 2 S serine 6.8 31 2 T threonine 4.8 22 2 V valine 6.4 29 1 W tryptophan 1.5 7 1 Y tyrosine 4.6 21 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343115 LOC100291414 1.000 PREDICTED: hypothetical protein XP_002347250 LOC100293627 0.584 PREDICTED: similar to hCG2036644 LOC100293660 0.396 PREDICTED: similar to hCG1990723 CENPE 0.011 centromere protein E ARHGAP11A 0.010 Rho GTPase activating protein 11A isoform 1 DDRGK1 0.009 DDRGK domain containing 1 RPGRIP1L 0.008 RPGRIP1-like isoform b RPGRIP1L 0.008 RPGRIP1-like isoform a CCDC148 0.008 coiled-coil domain containing 148 EPS15 0.008 epidermal growth factor receptor pathway substrate ... EPS15 0.008 epidermal growth factor receptor pathway substrate 15... LOC283685 0.008 PREDICTED: golgi autoantigen, golgin subfamily a-li... TGFBRAP1 0.007 transforming growth factor, beta receptor associate... TGFBRAP1 0.007 transforming growth factor, beta receptor associated... IPMK 0.007 inositol polyphosphate multikinase RNF20 0.007 ring finger protein 20 C1orf62 0.006 hypothetical protein LOC254268 RDX 0.006 radixin CLIP2 0.006 CAP-GLY domain containing linker protein 2 isoform ... RAI14 0.006 retinoic acid induced 14 isoform d RAI14 0.006 retinoic acid induced 14 isoform c RAI14 0.006 retinoic acid induced 14 isoform b RAI14 0.006 retinoic acid induced 14 isoform a RAI14 0.006 retinoic acid induced 14 isoform a RAI14 0.006 retinoic acid induced 14 isoform a TTC39C 0.006 tetratricopeptide repeat domain 39C isoform 1 [Homo... TTC39C 0.006 tetratricopeptide repeat domain 39C isoform 2 [Homo... CLIP2 0.006 CAP-GLY domain containing linker protein 2 isoform 2... ACSL3 0.006 acyl-CoA synthetase long-chain family member 3 [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
