Guide to the Human Genome
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Name: LOC100133263 Sequence: fasta or formatted (186aa) NCBI GI: 169165286
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {186aa} PREDICTED: hypothetical protein
alt mRNA {186aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         23           2
 C cysteine            3.2          6           1
 D aspartate           2.7          5           1
 E glutamate           2.2          4           2
 F phenylalanine       0.5          1           1
 G glycine            12.9         24           3
 H histidine           3.2          6           1
 I isoleucine          2.7          5           1
 K lysine              2.2          4           1
 L leucine             6.5         12           2
 M methionine          1.1          2           1
 N asparagine          1.1          2           1
 P proline            10.2         19           2
 Q glutamine           8.1         15           1
 R arginine           14.5         27           2
 S serine              9.1         17           1
 T threonine           3.2          6           1
 V valine              2.2          4           1
 W tryptophan          1.6          3           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100133263          1.000   PREDICTED: hypothetical protein 
LOC100133263          1.000   PREDICTED: hypothetical protein 
LOC100132405          0.474   PREDICTED: hypothetical protein 
LOC100132405          0.474   PREDICTED: hypothetical protein 
LOC100132405          0.474   PREDICTED: hypothetical protein 
LOC100292262          0.041   PREDICTED: hypothetical protein 
LOX                   0.038   lysyl oxidase preproprotein 
FLJ37078              0.036   hypothetical protein LOC222183 
LOC100288382          0.036   PREDICTED: hypothetical protein XP_002342213 
LOC100288568          0.033   PREDICTED: hypothetical protein XP_002343338 
LOC100292035          0.030   PREDICTED: hypothetical protein XP_002345623 
LOC100290372          0.030   PREDICTED: hypothetical protein XP_002346788 
LOC100288606          0.030   PREDICTED: hypothetical protein XP_002342652 
JPH2                  0.030   junctophilin 2 isoform 1 
KIAA1522              0.030   hypothetical protein LOC57648 
LOC100292058          0.027   PREDICTED: hypothetical protein XP_002344766 
LOC100290367          0.027   PREDICTED: hypothetical protein XP_002347417 
LOC100289917          0.027   PREDICTED: hypothetical protein XP_002347096 
LOC100288730          0.027   PREDICTED: hypothetical protein XP_002343287 
LOC100129036          0.027   PREDICTED: hypothetical protein 
ADAMTSL4              0.027   thrombospondin repeat containing 1 isoform 1 
IRS2                  0.027   insulin receptor substrate 2 
ADAMTSL4              0.027   thrombospondin repeat containing 1 isoform 2 
LOC100293285          0.027   PREDICTED: hypothetical protein 
LOC100289533          0.027   PREDICTED: hypothetical protein 
LOC100287250          0.027   PREDICTED: hypothetical protein XP_002344493 
LOC100289533          0.027   PREDICTED: hypothetical protein XP_002343635 
LOC728650             0.027   PREDICTED: hypothetical protein 
KIAA1602              0.027   hypothetical protein LOC57701 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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