LOC100130469 7390

Name: LOC100130469	Sequence: fasta or formatted (177aa)		NCBI GI: 169164740
Description: PREDICTED: similar to hCG1646178		Not currently referenced in the text
Other entries for this name: alt mRNA {177aa} PREDICTED: similar to hCG1646178
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 19 3 C cysteine 2.8 5 1 D aspartate 2.3 4 1 E glutamate 6.2 11 1 F phenylalanine 2.3 4 3 G glycine 4.5 8 1 H histidine 3.4 6 1 I isoleucine 4.5 8 2 K lysine 4.0 7 1 L leucine 11.3 20 2 M methionine 1.1 2 1 N asparagine 1.1 2 1 P proline 9.0 16 2 Q glutamine 10.7 19 4 R arginine 6.2 11 1 S serine 6.2 11 2 T threonine 6.2 11 2 V valine 5.1 9 1 W tryptophan 1.1 2 1 Y tyrosine 1.1 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1646178 LOC100130469 1.000 PREDICTED: similar to hCG1646178 LOC100287712 1.000 PREDICTED: hypothetical protein XP_002342290 MED15 0.141 mediator complex subunit 15 isoform a MED15 0.141 mediator complex subunit 15 isoform b ATP12A 0.081 hydrogen/potassium-exchanging ATPase 12A ATP1A1 0.045 Na+/K+ -ATPase alpha 1 subunit isoform c ATP1A1 0.045 Na+/K+ -ATPase alpha 1 subunit isoform d ATP1A1 0.045 Na+/K+ -ATPase alpha 1 subunit isoform a ATP1A2 0.042 Na+/K+ -ATPase alpha 2 subunit proprotein ATP1A3 0.042 Na+/K+ -ATPase alpha 3 subunit ATP10D 0.042 ATPase, class V, type 10D MN1 0.036 meningioma 1 ATP1A4 0.036 Na+/K+ -ATPase alpha 4 subunit isoform 1 NUMBL 0.024 numb homolog (Drosophila)-like LBXCOR1 0.024 LBXCOR1 homolog TLE2 0.024 transducin-like enhancer protein 2 isoform 1 SMARCD3 0.024 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.024 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.024 SWI/SNF related, matrix associated, actin dependent ... ADAT1 0.024 adenosine deaminase, tRNA-specific 1 TLE2 0.024 transducin-like enhancer protein 2 isoform 2 LOC100289922 0.021 PREDICTED: hypothetical protein XP_002347871 C14orf4 0.021 chromosome 14 open reading frame 4 BRD4 0.021 bromodomain-containing protein 4 isoform short BRD4 0.021 bromodomain-containing protein 4 isoform long PCLO 0.021 piccolo isoform 2 PCLO 0.021 piccolo isoform 1 COL13A1 0.021 alpha 1 type XIII collagen isoform 19 COL13A1 0.021 alpha 1 type XIII collagen isoform 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.