Guide to the Human Genome
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Name: ATP12A Sequence: fasta or formatted (1039aa) NCBI GI: 83700225
Description:

hydrogen/potassium-exchanging ATPase 12A

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases
Stomach, Small Intestine, and Colon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         73           2
 C cysteine            1.4         15           1
 D aspartate           5.2         54           2
 E glutamate           6.2         64           2
 F phenylalanine       3.9         41           2
 G glycine             6.6         69           2
 H histidine           1.9         20           1
 I isoleucine          9.3         97           3
 K lysine              6.5         68           3
 L leucine             9.4         98           2
 M methionine          2.5         26           1
 N asparagine          4.3         45           2
 P proline             3.6         37           2
 Q glutamine           3.6         37           2
 R arginine            3.8         40           2
 S serine              6.7         70           2
 T threonine           6.2         64           2
 V valine              7.4         77           2
 W tryptophan          1.2         12           2
 Y tyrosine            3.1         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hydrogen/potassium-exchanging ATPase 12A 
ATP1A1                0.643   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP4A                 0.643   hydrogen/potassium-exchanging ATPase 4A 
ATP1A1                0.643   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A3                0.643   Na+/K+ -ATPase alpha 3 subunit 
ATP1A1                0.642   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A2                0.639   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP1A4                0.604   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP2A3                0.159   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.159   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.159   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.159   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.159   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.159   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.159   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2A2                0.154   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.154   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2A1                0.152   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.152   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP2C1                0.148   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.148   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.148   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.148   calcium-transporting ATPase 2C1 isoform 1a 
ATP2C2                0.147   ATPase, Ca++ transporting, type 2C, member 2 
ATP2A2                0.140   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP2B2                0.125   plasma membrane calcium ATPase 2 isoform 2 
ATP2B1                0.110   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.110   plasma membrane calcium ATPase 1 isoform 1b 
ATP2B2                0.110   plasma membrane calcium ATPase 2 isoform 1 
ATP2B3                0.109   plasma membrane calcium ATPase 3 isoform 3b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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