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Search of human proteins with 16905367
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16905367 HRAS-like suppressor family, member 5 isoform 1
[Homo sapiens]
(279 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Hom... 563 e-161
gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Ho... 536 e-153
gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Ho... 475 e-134
gi|149588791 retinoic acid receptor responder (tazarotene induce... 149 3e-36
gi|8923526 HRAS-like suppressor 2 [Homo sapiens] 140 2e-33
gi|189571621 HRAS-like suppressor 3 [Homo sapiens] 138 6e-33
gi|189571618 HRAS-like suppressor 3 [Homo sapiens] 138 6e-33
gi|9966859 HRAS-like suppressor [Homo sapiens] 119 2e-27
gi|46249410 lecithin retinol acyltransferase [Homo sapiens] 57 2e-08
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 43 3e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 43 3e-04
gi|28557798 family with sequence similarity 84, member B [Homo s... 36 0.033
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.043
gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo s... 36 0.043
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 35 0.056
gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens] 35 0.095
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso... 34 0.16
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso... 34 0.16
gi|55741677 SET domain containing 1A [Homo sapiens] 34 0.16
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 33 0.21
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 33 0.21
gi|157785645 SPEG complex locus [Homo sapiens] 33 0.21
gi|122891864 zinc finger protein, subfamily 1A, 4 [Homo sapiens] 33 0.21
gi|109715854 calcium-regulated heat-stable protein 1 [Homo sapiens] 33 0.21
gi|109715858 calcium-regulated heat-stable protein 1 [Homo sapiens] 33 0.21
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.28
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 33 0.28
gi|13375646 leucine rich repeat and fibronectin type III domain ... 33 0.28
gi|33457316 pleckstrin homology domain containing, family O memb... 33 0.28
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.36
>gi|16905367 HRAS-like suppressor family, member 5 isoform 1 [Homo
sapiens]
Length = 279
Score = 563 bits (1451), Expect = e-161
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 1 MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELE 60
MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELE
Sbjct: 1 MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELE 60
Query: 61 ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI 120
ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI
Sbjct: 61 ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI 120
Query: 121 KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV 180
KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV
Sbjct: 121 KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV 180
Query: 181 KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGL 240
KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGL
Sbjct: 181 KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGL 240
Query: 241 RYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA 279
RYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA
Sbjct: 241 RYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA 279
>gi|226491950 HRAS-like suppressor family, member 5 isoform 2 [Homo
sapiens]
Length = 269
Score = 536 bits (1382), Expect = e-153
Identities = 269/279 (96%), Positives = 269/279 (96%), Gaps = 10/279 (3%)
Query: 1 MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELE 60
MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHS E
Sbjct: 1 MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHS----------E 50
Query: 61 ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI 120
ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI
Sbjct: 51 ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI 110
Query: 121 KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV 180
KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV
Sbjct: 111 KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV 170
Query: 181 KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGL 240
KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGL
Sbjct: 171 KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGL 230
Query: 241 RYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA 279
RYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA
Sbjct: 231 RYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA 269
>gi|226528146 HRAS-like suppressor family, member 5 isoform 3 [Homo
sapiens]
Length = 253
Score = 475 bits (1222), Expect = e-134
Identities = 235/243 (96%), Positives = 236/243 (97%)
Query: 1 MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELE 60
MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELE
Sbjct: 1 MGLSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELE 60
Query: 61 ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI 120
ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI
Sbjct: 61 ESVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLI 120
Query: 121 KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV 180
KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV
Sbjct: 121 KQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVV 180
Query: 181 KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGL 240
KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNC +G
Sbjct: 181 KYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCRARPDGR 240
Query: 241 RYG 243
G
Sbjct: 241 SEG 243
>gi|149588791 retinoic acid receptor responder (tazarotene induced)
3 [Homo sapiens]
Length = 164
Score = 149 bits (376), Expect = 3e-36
Identities = 77/142 (54%), Positives = 98/142 (69%), Gaps = 4/142 (2%)
Query: 130 PRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGS--ITSIFSNRAVVKYSRLED 187
P+PGDLIEIFR+GYEHWA+Y+ D V+HLAPPSE GS + S+ SN A VK RLED
Sbjct: 8 PKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEVKRERLED 67
Query: 188 VLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRS 247
V+ GC ++VNN LD Y P PV+ II K+MV + ++YS++ NCEHFV LRYG R
Sbjct: 68 VVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQLRYGKSRC 127
Query: 248 QQVEHALME--GAKAAGAVISA 267
+QVE A +E A A G ++ A
Sbjct: 128 KQVEKAKVEVGVATALGILVVA 149
>gi|8923526 HRAS-like suppressor 2 [Homo sapiens]
Length = 162
Score = 140 bits (352), Expect = 2e-33
Identities = 76/146 (52%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
Query: 124 AEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVK 181
A +PRPR GDLIEI R GY HWAIYV D VVHLAP SE G S+ S +N+A+VK
Sbjct: 2 ALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIVK 61
Query: 182 YSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLR 241
L V G +++VNNK D Y PLP +KI++R +++V + + YSL NCEHFVN LR
Sbjct: 62 KELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHLR 121
Query: 242 YGVPRSQQVEHALMEGAKAAGAVISA 267
YGV RS QV A+ AAG + +A
Sbjct: 122 YGVSRSDQVTGAVTTVGVAAGLLAAA 147
>gi|189571621 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 138 bits (347), Expect = 6e-33
Identities = 75/143 (52%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 128 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 185
P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L
Sbjct: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
Query: 186 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVP 245
DV ++VNNK D Y PLP KIIQR +++V + V Y L NCEHFVN LRYGV
Sbjct: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125
Query: 246 RSQQVEHALMEGAKAAGAVISAV 268
RS QV ++ A AG ++A+
Sbjct: 126 RSDQVRDVII-AASVAGMGLAAM 147
>gi|189571618 HRAS-like suppressor 3 [Homo sapiens]
Length = 162
Score = 138 bits (347), Expect = 6e-33
Identities = 75/143 (52%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 128 PRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVG--SITSIFSNRAVVKYSRL 185
P P+PGDLIEIFR Y HWAIYV D VVHLAPPSE G S+ S +++A+VK L
Sbjct: 6 PEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIVKKELL 65
Query: 186 EDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVP 245
DV ++VNNK D Y PLP KIIQR +++V + V Y L NCEHFVN LRYGV
Sbjct: 66 YDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNELRYGVA 125
Query: 246 RSQQVEHALMEGAKAAGAVISAV 268
RS QV ++ A AG ++A+
Sbjct: 126 RSDQVRDVII-AASVAGMGLAAM 147
>gi|9966859 HRAS-like suppressor [Homo sapiens]
Length = 168
Score = 119 bits (299), Expect = 2e-27
Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 130 PRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSE-EFEVGSITSIFSNRAVVKYSRLEDV 188
P PGDLIE+FR GY+HWA+Y+ D V+++AP S S+FS++A+VK L+DV
Sbjct: 15 PCPGDLIEVFRPGYQHWALYLGDGYVINIAPVDGIPASFTSAKSVFSSKALVKMQLLKDV 74
Query: 189 LHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQ 248
+ ++++NNK D TY PLPV++II+R++ ++ + V Y+L+ NCEHFV LRYG S+
Sbjct: 75 VGNDTYRINNKYDETYPPLPVEEIIKRSEFVIGQEVAYNLLVNNCEHFVTLLRYGEGVSE 134
Query: 249 QVEHAL--MEGAKAAGAVIS 266
Q A+ +E AA V S
Sbjct: 135 QANRAISTVEFVTAAVGVFS 154
>gi|46249410 lecithin retinol acyltransferase [Homo sapiens]
Length = 230
Score = 57.0 bits (136), Expect = 2e-08
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 133 GDLIEIFRIGYEHWAIYVEDDCVVHLAPP---SEEFEVGSITSIFSNR----------AV 179
GD++E+ R H+ IY+ D+ V H+ P + ++G + SN+ A
Sbjct: 48 GDVLEVPRTHLTHYGIYLGDNRVAHMMPDILLALTDDMGRTQKVVSNKRLILGVIVKVAS 107
Query: 180 VKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNG 239
++ +ED +G + VN+ + +++ + R + + YSL+ NCEHFV
Sbjct: 108 IRVDTVEDFAYGANILVNHLDESLQKKALLNEEVARRAEKLLGFTPYSLLWNNCEHFVTY 167
Query: 240 LRYGVPRSQQ 249
RYG P S Q
Sbjct: 168 CRYGTPISPQ 177
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 42.7 bits (99), Expect = 3e-04
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 11 YALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQ 70
+ALR R PP P P ++ +GP +PP L S P G L E G +
Sbjct: 777 FALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPG 836
Query: 71 LPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLIKQAAEGKPRP 130
PA P E+ +G T PS+ + +P E IKQ RP
Sbjct: 837 PPAPAGPASDTEEEEPGPEG--------TPPSRGSSGEGLPFAEEGNLTIKQ------RP 882
Query: 131 RP 132
+P
Sbjct: 883 KP 884
Score = 33.5 bits (75), Expect = 0.21
Identities = 21/53 (39%), Positives = 25/53 (47%)
Query: 12 ALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVG 64
A RLP P PL SRT ++ P L S +P GL+ SP SVG
Sbjct: 271 AARLPSAPTPLRPGFSRTPQPPAEEPPHPLTYSQLPRVGLSPDSPAGDRNSVG 323
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 42.7 bits (99), Expect = 3e-04
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 11 YALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQ 70
+ALR R PP P P ++ +GP +PP L S P G L E G +
Sbjct: 859 FALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPRRRTLSEPAGPSEPPG 918
Query: 71 LPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLIKQAAEGKPRP 130
PA P E+ +G T PS+ + +P E IKQ RP
Sbjct: 919 PPAPAGPASDTEEEEPGPEG--------TPPSRGSSGEGLPFAEEGNLTIKQ------RP 964
Query: 131 RP 132
+P
Sbjct: 965 KP 966
Score = 33.5 bits (75), Expect = 0.21
Identities = 21/53 (39%), Positives = 25/53 (47%)
Query: 12 ALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVG 64
A RLP P PL SRT ++ P L S +P GL+ SP SVG
Sbjct: 353 AARLPSAPTPLRPGFSRTPQPPAEEPPHPLTYSQLPRVGLSPDSPAGDRNSVG 405
>gi|28557798 family with sequence similarity 84, member B [Homo
sapiens]
Length = 310
Score = 36.2 bits (82), Expect = 0.033
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 20/114 (17%)
Query: 131 RPGDLIE-IFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVVKYSRLEDVL 189
+PGDL+E + + Y HWA+YV + VVHL +R V S L D
Sbjct: 117 KPGDLVEFVSQAQYPHWAVYVGNFQVVHL-----------------HRLEVINSFLTDAS 159
Query: 190 HGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRYG 243
G +V N L Y PL +++ V + L N E F RYG
Sbjct: 160 QGRRGRVVNDL-YRYKPLSSSAVVRNALAHVG-AKERELSWRNSESFAAWCRYG 211
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.8 bits (81), Expect = 0.043
Identities = 38/114 (33%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 4 SPGAEGEYALRLPRIP--PPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEE 61
SP G A PR P P PKP A P+ PP R+ A P G S SPL
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP--RKDAAPALGPLSSSPLATPS 308
Query: 62 SVGFA---------ALVQLPAKQPPPGTLEQGRSI-QQGEKAVVSLETTPSQKA 105
G A LPA PP L + A SL+T PS A
Sbjct: 309 PSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPA 362
>gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo
sapiens]
Length = 486
Score = 35.8 bits (81), Expect = 0.043
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Query: 12 ALRLPRIPPPLPKPASRTA----GTGPKDQPPALRRS---AVPHSGLNSISPLELEESVG 64
A+ P +P PLPK S A GT P + +R S VP + P + EE
Sbjct: 284 AMEEPAVPAPLPKKISSEAWPPVGTPPSSESEPVRTSREHPVPLLPIRQTLPEDNEEPPA 343
Query: 65 FAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLIKQAA 124
PP TLE +Q E+ V E P + + P+PEN+ + +++
Sbjct: 344 L-----------PPRTLE---GLQVEEEPVYEAEPEPEPEPE----PEPENDYEDVEEMD 385
Query: 125 EGKPRPRP-GDLIEI 138
+ P GD E+
Sbjct: 386 RHEQEDEPEGDYEEV 400
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 35.4 bits (80), Expect = 0.056
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
Query: 19 PPPLPKPASRTAGTGPKDQPPA------LRRSAVPHSGLNSI----SPLELEESVGFAAL 68
PPPLP + A GP QPP L P G ++ +P L S+ AA
Sbjct: 269 PPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGAPPFLASSLLSAAA 328
Query: 69 VQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQK 104
PPP TL+ R Q A S PSQ+
Sbjct: 329 KAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQR 364
Score = 30.4 bits (67), Expect = 1.8
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 16 PRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQ 75
PR P P+P+P S P+ P L S + GL + P S G L+ A
Sbjct: 389 PRAPAPVPQPFSL-----PEPSQPIL-PSVLSLLGLPTPGP---SHSDGSFNLLGSDAHL 439
Query: 76 PPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIP 111
PPP TL G Q SL T S SS+P
Sbjct: 440 PPPPTLSSGSPPQPRHPIQPSLPGTTS--GSLSSVP 473
Score = 28.1 bits (61), Expect = 8.9
Identities = 41/145 (28%), Positives = 53/145 (36%), Gaps = 29/145 (20%)
Query: 3 LSPGA-EGEYALRLPRIPPP----LPKPASR----------------TAGTGPKDQPPAL 41
L+PG EG L +PPP LP P++ TAG G A
Sbjct: 587 LAPGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAG 646
Query: 42 RRSAVPHSGLNSISPLELEESVGFAALVQLPAK------QPPPGTLEQGRSIQQGEKA-V 94
S P SGL +SPL L+ L + PP GT Q + +
Sbjct: 647 GPSGEPFSGLGDLSPLLFPPLSAPPTLIALNSALLAATLDPPSGTPPQPCVLSAPQPGPP 706
Query: 95 VSLETTPSQKADWSSIPK-PENEGK 118
S TT + SS+ K P N G+
Sbjct: 707 TSSVTTATTDPGASSLGKAPSNSGR 731
>gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]
Length = 1543
Score = 34.7 bits (78), Expect = 0.095
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 4 SPGAEGEYALRLPRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEES 62
S G G +LP PPP S+ +GTGP QP A ++ H+ S SPL + S
Sbjct: 1015 SKGGPGGVVTQLPARPPPALYTCSQCSGTGPSSQPGA----SLAHTA--SASPLASQSS 1067
>gi|225543215 antigen identified by monoclonal antibody Ki-67 isoform
2 [Homo sapiens]
Length = 2896
Score = 33.9 bits (76), Expect = 0.16
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 55 SPLELEESVGFAALVQLPAKQPPPGTLEQGRSIQQGEK------------AVVSLETTPS 102
+P EES+ ++P K PPP + S ++ K AV L T
Sbjct: 2208 APGHTEESMTIDKNTKIPCKSPPPELTDTATSTKRCPKTRPRKEVKEELSAVERLTQTSG 2267
Query: 103 QKADWSSIPKPENEG-KLIKQAAEGKPRP 130
Q P +EG K++KQ A+ KP P
Sbjct: 2268 QSTHTHKEPASGDEGIKVLKQRAKKKPNP 2296
>gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform
1 [Homo sapiens]
Length = 3256
Score = 33.9 bits (76), Expect = 0.16
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 55 SPLELEESVGFAALVQLPAKQPPPGTLEQGRSIQQGEK------------AVVSLETTPS 102
+P EES+ ++P K PPP + S ++ K AV L T
Sbjct: 2568 APGHTEESMTIDKNTKIPCKSPPPELTDTATSTKRCPKTRPRKEVKEELSAVERLTQTSG 2627
Query: 103 QKADWSSIPKPENEG-KLIKQAAEGKPRP 130
Q P +EG K++KQ A+ KP P
Sbjct: 2628 QSTHTHKEPASGDEGIKVLKQRAKKKPNP 2656
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.9 bits (76), Expect = 0.16
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 17/67 (25%)
Query: 19 PPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQPPP 78
P P P+P R + P PP RR ++V F+A+ +PA +PPP
Sbjct: 1141 PAPAPRPDERPSSPIPLLPPPKKRR-----------------KTVSFSAIEVVPAPEPPP 1183
Query: 79 GTLEQGR 85
T Q +
Sbjct: 1184 ATPPQAK 1190
Score = 28.5 bits (62), Expect = 6.8
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 19 PPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPL--ELEESVGFA 66
PP P+P G GP + +R S P S S SP ESV FA
Sbjct: 434 PPEPPEPGGGGGGGGPSPEREEVRTSPRPASPARSGSPAPETTNESVPFA 483
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 33.5 bits (75), Expect = 0.21
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 14/123 (11%)
Query: 14 RLPRIPPPLPKPASRTAGTGPKDQPPALRRS-----AVPHSGLNSISPL---ELEESVGF 65
RL R PPP P PA+ + G P PP S P+ GL + +PL L
Sbjct: 756 RLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPA-APLAGPALPARRLS 814
Query: 66 AALVQLPAKQP--PPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLIKQA 123
A L A QP P G S + + L TP+ +A + P P+ A
Sbjct: 815 RASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARA---AAPSPDRRDSASPGA 871
Query: 124 AEG 126
A G
Sbjct: 872 AGG 874
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 33.5 bits (75), Expect = 0.21
Identities = 58/211 (27%), Positives = 76/211 (36%), Gaps = 40/211 (18%)
Query: 20 PPLPKPASRTAGTGPK-DQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQPPP 78
PP P P R + P P RRS VP S + A P PPP
Sbjct: 375 PPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQRRSPVPPSCPAPQPRPPPPPPP 434
Query: 79 G--TLE----------------QGRS--IQQGEKAVVSLETTPSQKADWSSIPKPENEGK 118
G TL QGR + E A + + P +A+ +++PKP G
Sbjct: 435 GERTLAERAYAKPPSHHVKAGFQGRRSYSELAEGAAYAGASPPWLQAEAATLPKPRAYGS 494
Query: 119 LIKQAAEGKPRP-RPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSIT------ 171
+ G RP P E R+ +E ED+ V +PPS EVG+I
Sbjct: 495 EL----YGPGRPLSPRRAFEGIRLRFEKQP-SEEDEWAVPTSPPSP--EVGTIRCASFCA 547
Query: 172 --SIFSNRAVVKYSRLEDVLHGCSWKVNNKL 200
I + A Y+ E H SW N L
Sbjct: 548 GFPIPESPAATAYAHAE---HAQSWPSINLL 575
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.5 bits (75), Expect = 0.21
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 19 PPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQ-PP 77
P LP P A G + LRR + S L P EL + AA V+LP ++ P
Sbjct: 1989 PEALPSPGQEPAA-GASPRRGELRRGSSAESALPRAGPRELGRGLHKAASVELPQRRSPS 2047
Query: 78 PGTLEQGR-SIQQGEKA 93
PG R + +GE A
Sbjct: 2048 PGATRLARGGLGEGEYA 2064
>gi|122891864 zinc finger protein, subfamily 1A, 4 [Homo sapiens]
Length = 585
Score = 33.5 bits (75), Expect = 0.21
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 3 LSPGAEGEYALRLPRIPPPLPKPASRTAGTGPKD-----------QPPALRRSAVPHSGL 51
L+P Y P +P L P SR AG GP+D + P A P +G
Sbjct: 395 LTPVISSVYTQMQP-LPGRLELPGSREAGEGPEDLADGGPLLYRPRGPLTDPGASPSNGC 453
Query: 52 NSISPLELEESVGFAALVQLPAKQP--PPGTLEQGR 85
+ E A +V LP P PP T+ GR
Sbjct: 454 QDSTDTESNHEDRVAGVVSLPQGPPPQPPPTIVVGR 489
>gi|109715854 calcium-regulated heat-stable protein 1 [Homo
sapiens]
Length = 147
Score = 33.5 bits (75), Expect = 0.21
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 19 PPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQPP 77
PPP P+P + A G D P + RS P G SPL + F+A V+ A Q P
Sbjct: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVR--ASQGP 61
>gi|109715858 calcium-regulated heat-stable protein 1 [Homo
sapiens]
Length = 147
Score = 33.5 bits (75), Expect = 0.21
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 19 PPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQPP 77
PPP P+P + A G D P + RS P G SPL + F+A V+ A Q P
Sbjct: 5 PPPPPQPPTHQASVGLLDTPRSRERSPSPLRGNVVPSPLPTRRTRTFSATVR--ASQGP 61
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 33.1 bits (74), Expect = 0.28
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 4 SPGAEGEYALRLPRIP--PPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEE 61
SP G A PR P P PKP A P+ PP R+ A P G S SPL
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP--RKDAAPALGPLSSSPLATPS 308
Query: 62 SVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKP 113
+A +Q A P T Q + +PS ++P P
Sbjct: 309 P---SAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSP 357
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 33.1 bits (74), Expect = 0.28
Identities = 38/142 (26%), Positives = 54/142 (38%), Gaps = 25/142 (17%)
Query: 17 RIPPPLPKPASRTAGTGPKDQPPALR--------RSAVPHSGLNSISPLELEESVGFAA- 67
++PPPLP SR P P LR R A+P G + S S A
Sbjct: 217 KLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGL 276
Query: 68 ---LVQLPAKQPPPGTLEQGRSIQQG-EKAVVSLETTPSQKADWSSIPKPENEGKLIKQ- 122
L P+ + G+ Q +A S + P + S+P P+ +G+ ++Q
Sbjct: 277 GTELTLTPSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQP 336
Query: 123 ------AAEGKPR-----PRPG 133
A G PR PRPG
Sbjct: 337 RLLRAALARGAPRGRTPSPRPG 358
>gi|13375646 leucine rich repeat and fibronectin type III domain
containing 3 [Homo sapiens]
Length = 628
Score = 33.1 bits (74), Expect = 0.28
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 8 EGEYALRLPRIPPPLPKPASRTAGTGPKDQPP--------ALRRSAVPHSGLNSISPLEL 59
E A+ L PPP P+ A+ T+ P+D P A + V +G + +++
Sbjct: 374 EATAAVELTVGPPPPPQLANSTSCDPPRDGDPDALTPPSAASASAKVADTGPPTDRGVQV 433
Query: 60 EESVGFAALVQLPAKQPPPG 79
E AALVQ P ++P PG
Sbjct: 434 TEHGATAALVQWPDQRPIPG 453
>gi|33457316 pleckstrin homology domain containing, family O member
2 [Homo sapiens]
Length = 490
Score = 33.1 bits (74), Expect = 0.28
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 16 PRIPPPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEESVGFAALVQLPAKQ 75
P +PP P A T G + + P R+ P S + +SP E +E A ++Q
Sbjct: 202 PLMPPTKPFLAPETTSPGDRVETPVGERAPTPVSASSEVSP-ESQEDSETPAEEDSGSEQ 260
Query: 76 PPPGTLEQGRSIQQGEKAVVSLETTPSQKADWSSIPKPENEGKLIKQAAEGKPR 129
PP L +K VS E Q+A + +P + +E PR
Sbjct: 261 PPNSVLP--------DKLKVSWENPSPQEAPAAESAEPSQAP--CSETSEAAPR 304
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 32.7 bits (73), Expect = 0.36
Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 4 SPGAEGEYALRLPRIP--PPLPKPASRTAGTGPKDQPPALRRSAVPHSGLNSISPLELEE 61
SP G A PR P P PKP A P+ PP R+ A P G S SPL
Sbjct: 242 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP--RKDAAPALGPLSSSPLATPS 299
Query: 62 SVGFAALVQLPAKQPPPGTLEQGRSIQQGEKAVVSLETT----PSQKADWSSIPKP 113
P+ P P +++ S TT P+ +A S +P P
Sbjct: 300 ----------PSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP 345
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,191,146
Number of Sequences: 37866
Number of extensions: 718810
Number of successful extensions: 3449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 3205
Number of HSP's gapped (non-prelim): 390
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.