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Search of human proteins with 110626171
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|110626171 serine peptidase inhibitor, Kunitz type 4 [Homo
sapiens]
(99 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|110626171 serine peptidase inhibitor, Kunitz type 4 [Homo sap... 212 6e-56
gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo sap... 54 3e-08
gi|5730091 tissue factor pathway inhibitor 2 [Homo sapiens] 51 2e-07
gi|73760409 tissue factor pathway inhibitor isoform b precursor ... 49 7e-07
gi|5454114 tissue factor pathway inhibitor isoform a precursor [... 49 7e-07
gi|31563528 serine peptidase inhibitor-like, with Kunitz and WAP... 48 2e-06
gi|10732863 serine peptidase inhibitor-like, with Kunitz and WAP... 48 2e-06
gi|189571689 serine protease inhibitor, Kunitz type, 3 [Homo sap... 47 4e-06
gi|10863909 serine protease inhibitor, Kunitz type, 2 [Homo sapi... 45 9e-06
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s... 45 1e-05
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s... 45 1e-05
gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo ... 45 1e-05
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 45 2e-05
gi|214010181 amyloid beta (A4) precursor-like protein 2 isoform ... 44 2e-05
gi|4502147 amyloid beta (A4) precursor-like protein 2 isoform 1 ... 44 2e-05
gi|153946389 WAP four-disulfide core domain 8 precursor [Homo sa... 44 3e-05
gi|153946387 WAP four-disulfide core domain 8 precursor [Homo sa... 44 3e-05
gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and n... 43 6e-05
gi|28212222 WFIKKN2 protein [Homo sapiens] 42 8e-05
gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2 ... 42 1e-04
gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2 p... 42 1e-04
gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1 ... 42 1e-04
gi|154759255 collagen, type XXVIII precursor [Homo sapiens] 42 1e-04
gi|145309328 papilin [Homo sapiens] 40 3e-04
gi|41406055 amyloid beta A4 protein isoform b precursor [Homo sa... 39 0.001
gi|4502167 amyloid beta A4 protein isoform a precursor [Homo sap... 39 0.001
gi|209915573 amyloid beta A4 protein isoform f precursor [Homo s... 39 0.001
gi|17978479 vacuolar protein sorting 16 isoform 1 [Homo sapiens] 27 2.7
gi|17978481 vacuolar protein sorting 16 isoform 3 [Homo sapiens] 27 2.7
gi|21264341 spermine synthase [Homo sapiens] 27 3.5
>gi|110626171 serine peptidase inhibitor, Kunitz type 4 [Homo
sapiens]
Length = 99
Score = 212 bits (539), Expect = 6e-56
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MKSAKLGFLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEVHFRYFYN 60
MKSAKLGFLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEVHFRYFYN
Sbjct: 1 MKSAKLGFLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEVHFRYFYN 60
Query: 61 RTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPPR 99
RTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPPR
Sbjct: 61 RTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPPR 99
>gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo
sapiens]
Length = 352
Score = 53.5 bits (127), Expect = 3e-08
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 38 KDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
+D C+L + G C + RYFYN TS CETF + GC GN NNF + E C
Sbjct: 228 EDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 281
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 25 GVNKIAEKICGDL---KDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNF 81
G N + EK C C L + G C + ++ +C F + GC GN N F
Sbjct: 268 GNNFVTEKECLQTCRTVAACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKF 327
Query: 82 KLKIEREVAC 91
+ E C
Sbjct: 328 YSEKECREYC 337
>gi|5730091 tissue factor pathway inhibitor 2 [Homo sapiens]
Length = 235
Score = 51.2 bits (121), Expect = 2e-07
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 30 AEKICGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREV 89
A++ G+ + C L +++G C + RY+Y+R ++ C F++ GC GN NNF +
Sbjct: 25 AQEPTGNNAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDD 84
Query: 90 ACVAKYKPPR 99
AC K P+
Sbjct: 85 ACWRIEKVPK 94
Score = 40.8 bits (94), Expect = 2e-04
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 34 CGDLKDP--CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
C K P C + G C RY++N + C+ F ++GC GN NNF + + + AC
Sbjct: 149 CAPKKIPSFCYSPKDEGLCSANVTRYYFNPRYRTCDAFTYTGCGGNDNNFVSREDCKRAC 208
Query: 92 VAKYK 96
K
Sbjct: 209 AKALK 213
Score = 28.9 bits (63), Expect = 0.92
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 41 CKLDMNFGS-CYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPPR 99
C+L ++ C +YF+N +S CE F GC + N + + E C+ P +
Sbjct: 96 CRLQVSVDDQCEGSTEKYFFNLSSMTCEKFFSGGC--HRNRIENRFPDEATCMGFCAPKK 153
>gi|73760409 tissue factor pathway inhibitor isoform b precursor
[Homo sapiens]
Length = 251
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 39 DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
D C L+ + G C RYFYN +K+CE F + GC GN+NNF+ E + C
Sbjct: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
Score = 43.1 bits (100), Expect = 5e-05
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 41 CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
C + G C + R+F+N +++CE F++ GC GN N F+ E + C
Sbjct: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
>gi|5454114 tissue factor pathway inhibitor isoform a precursor
[Homo sapiens]
Length = 304
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 39 DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
D C L+ + G C RYFYN +K+CE F + GC GN+NNF+ E + C
Sbjct: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
Score = 43.1 bits (100), Expect = 5e-05
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 41 CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
C + G C + R+F+N +++CE F++ GC GN N F+ E + C
Sbjct: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
Score = 41.6 bits (96), Expect = 1e-04
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 41 CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
C + G C R++YN +C F +SGC GN NNF K E AC
Sbjct: 217 CLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRAC 267
>gi|31563528 serine peptidase inhibitor-like, with Kunitz and WAP
domains 1 isoform 2 [Homo sapiens]
Length = 117
Score = 47.8 bits (112), Expect = 2e-06
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 32 KICGDLK-DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVA 90
K C DLK D C++ G C ++Y++ C FV+ GC GN NNF+ K
Sbjct: 51 KKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKANCLNT 110
Query: 91 CVAKYKP 97
C K P
Sbjct: 111 CKNKRFP 117
>gi|10732863 serine peptidase inhibitor-like, with Kunitz and WAP
domains 1 isoform 1 precursor [Homo sapiens]
Length = 133
Score = 47.8 bits (112), Expect = 2e-06
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 32 KICGDLK-DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVA 90
K C DLK D C++ G C ++Y++ C FV+ GC GN NNF+ K
Sbjct: 67 KKCLDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKANCLNT 126
Query: 91 CVAKYKP 97
C K P
Sbjct: 127 CKNKRFP 133
>gi|189571689 serine protease inhibitor, Kunitz type, 3 [Homo
sapiens]
Length = 89
Score = 46.6 bits (109), Expect = 4e-06
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 4 AKLGFLLRFFIFCSLNTLLLGGVNKIAEKICGDL-KDPCKLDMNFGSCYEVHFRYFYNRT 62
A L FLL + TL L +++A DL + C M G C R+F+N
Sbjct: 5 ASLSFLL-------ILTLCLELRSELARDTIKDLLPNVCAFPMEKGPCQTYMTRWFFNFE 57
Query: 63 SKRCETFVFSGCNGNLNNFKLKIEREVAC 91
+ CE F + GC GN NNF K + E C
Sbjct: 58 TGECELFAYGGCGGNSNNFLRKEKCEKFC 86
>gi|10863909 serine protease inhibitor, Kunitz type, 2 [Homo
sapiens]
Length = 252
Score = 45.4 bits (106), Expect = 9e-06
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 18 LNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGN 77
L +LLL GV +A + D C + G C R++YN T C+ FV+ GC+GN
Sbjct: 17 LGSLLLSGV--LAADRERSIHDFCLVSKVVGRCRASMPRWWYNVTDGSCQLFVYGGCDGN 74
Query: 78 LNNFKLKIE 86
NN+ K E
Sbjct: 75 SNNYLTKEE 83
Score = 33.5 bits (75), Expect = 0.037
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 41 CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPP 98
C + G C R++++ C F++ GC GN N+++ + + C + + P
Sbjct: 133 CTANAVTGPCRASFPRWYFDVERNSCNNFIYGGCRGNKNSYRSEEACMLRCFRQQENP 190
>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
sapiens]
Length = 2971
Score = 45.1 bits (105), Expect = 1e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 39 DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPP 98
D CKL + G+C + +++Y+ +K C F + GC GN N F + E E C P
Sbjct: 2904 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAPVLAKP 2963
>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
sapiens]
Length = 3177
Score = 45.1 bits (105), Expect = 1e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 39 DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPP 98
D CKL + G+C + +++Y+ +K C F + GC GN N F + E E C P
Sbjct: 3110 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAPVLAKP 3169
>gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo
sapiens]
Length = 2570
Score = 45.1 bits (105), Expect = 1e-05
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 39 DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPP 98
D CKL + G+C + +++Y+ +K C F + GC GN N F + E E C P
Sbjct: 2503 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAPVLAKP 2562
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 44.7 bits (104), Expect = 2e-05
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 36 DLKDPCKLDMNFGSCYEVHFRYFYNR---TSKRCETFVFSGCNGNLNNFKLKIEREVACV 92
D DPC L ++ GSC R+++ +++ C FV+ GC GN N F + E C
Sbjct: 2871 DSDDPCSLPLDEGSCTAYTLRWYHRAVTGSTEACHPFVYGGCGGNANRFGTREACERRC- 2929
Query: 93 AKYKPPR 99
PPR
Sbjct: 2930 ----PPR 2932
>gi|214010181 amyloid beta (A4) precursor-like protein 2 isoform 2
[Homo sapiens]
Length = 751
Score = 44.3 bits (103), Expect = 2e-05
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 31 EKICGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVA 90
++I D+K C + G C V R++++ + +C F++ GC GN NNF+ +
Sbjct: 300 KEITHDVKAVCSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAV 359
Query: 91 CVAKYKP 97
C A P
Sbjct: 360 CKAMIPP 366
>gi|4502147 amyloid beta (A4) precursor-like protein 2 isoform 1
[Homo sapiens]
Length = 763
Score = 44.3 bits (103), Expect = 2e-05
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 31 EKICGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVA 90
++I D+K C + G C V R++++ + +C F++ GC GN NNF+ +
Sbjct: 300 KEITHDVKAVCSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAV 359
Query: 91 CVAKYKP 97
C A P
Sbjct: 360 CKAMIPP 366
>gi|153946389 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 43.9 bits (102), Expect = 3e-05
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 31 EKICGD-LKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREV 89
+K C D ++PC L + G+C R+ ++ + RC F + GC GN NNF +
Sbjct: 84 QKKCMDPFQEPCMLPVRHGNCNHEAQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRT 143
Query: 90 ACV 92
AC+
Sbjct: 144 ACM 146
>gi|153946387 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 43.9 bits (102), Expect = 3e-05
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 31 EKICGD-LKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREV 89
+K C D ++PC L + G+C R+ ++ + RC F + GC GN NNF +
Sbjct: 84 QKKCMDPFQEPCMLPVRHGNCNHEAQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRT 143
Query: 90 ACV 92
AC+
Sbjct: 144 ACM 146
>gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and
netrin domain containing 1 precursor [Homo sapiens]
Length = 548
Score = 42.7 bits (99), Expect = 6e-05
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 39 DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPP 98
D C L G C R+ Y+ ++C FV+ GC GN NNF + E AC PP
Sbjct: 357 DACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACPVPRTPP 416
>gi|28212222 WFIKKN2 protein [Homo sapiens]
Length = 576
Score = 42.4 bits (98), Expect = 8e-05
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 41 CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
C L G C R+ YN + +C++FV+ GC GN NNF+ + E +C
Sbjct: 386 CSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNGNNFESREACEESC 436
Score = 32.7 bits (73), Expect = 0.064
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 50 CYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVA 93
C E R+ ++ + C TF F C+ NLN+F+ +AC++
Sbjct: 337 CGEEQTRWHFDAQANNCLTFTFGHCHRNLNHFETYEACMLACMS 380
>gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 38 KDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
+D C G C R++Y+ T + C++FV+ GC GN NN+ + E +AC
Sbjct: 247 EDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 300
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Query: 34 CGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACV 92
C DL D G C E R++YN S+ C F + GC GN NNF E E C+
Sbjct: 375 CVDLPDT-------GLCKESIPRWYYNPFSEHCARFTYGGCYGNKNNF----EEEQQCL 422
>gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 38 KDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
+D C G C R++Y+ T + C++FV+ GC GN NN+ + E +AC
Sbjct: 247 EDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 300
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Query: 34 CGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACV 92
C DL D G C E R++YN S+ C F + GC GN NNF E E C+
Sbjct: 375 CVDLPDT-------GLCKESIPRWYYNPFSEHCARFTYGGCYGNKNNF----EEEQQCL 422
>gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1
precursor [Homo sapiens]
Length = 529
Score = 42.0 bits (97), Expect = 1e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 38 KDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
+D C G C R++Y+ T + C++FV+ GC GN NN+ + E +AC
Sbjct: 247 EDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 300
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
Query: 34 CGDLKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACV 92
C DL D G C E R++YN S+ C F + GC GN NNF E E C+
Sbjct: 391 CVDLPDT-------GLCKESIPRWYYNPFSEHCARFTYGGCYGNKNNF----EEEQQCL 438
>gi|154759255 collagen, type XXVIII precursor [Homo sapiens]
Length = 1125
Score = 42.0 bits (97), Expect = 1e-04
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 38 KDP-CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACV 92
+DP C + G+C E R++Y++ C F FSGCNG+ N F + E + C+
Sbjct: 1068 EDPRCLEALKPGNCGEYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKECQETCI 1123
>gi|145309328 papilin [Homo sapiens]
Length = 1251
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 41 CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVAKYKPPR 99
C L GSC + R+++ + +C F + GC+GN NNF + E +C PR
Sbjct: 727 CLLPSAHGSCADWAARWYFVASVGQCNRFWYGGCHGNANNFASEQECMSSCQGSLHGPR 785
>gi|41406055 amyloid beta A4 protein isoform b precursor [Homo
sapiens]
Length = 751
Score = 38.5 bits (88), Expect = 0.001
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 37 LKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVA 93
+++ C G C + R++++ T +C F + GC GN NNF + E C+A
Sbjct: 287 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNF----DTEEYCMA 339
>gi|4502167 amyloid beta A4 protein isoform a precursor [Homo
sapiens]
Length = 770
Score = 38.5 bits (88), Expect = 0.001
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 37 LKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVA 93
+++ C G C + R++++ T +C F + GC GN NNF + E C+A
Sbjct: 287 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNF----DTEEYCMA 339
>gi|209915573 amyloid beta A4 protein isoform f precursor [Homo
sapiens]
Length = 714
Score = 38.5 bits (88), Expect = 0.001
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 37 LKDPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVACVA 93
+++ C G C + R++++ T +C F + GC GN NNF + E C+A
Sbjct: 231 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNF----DTEEYCMA 283
>gi|17978479 vacuolar protein sorting 16 isoform 1 [Homo sapiens]
Length = 839
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 7 GFLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCK 42
G L + ++ TL+LGG NK AE++ D + P K
Sbjct: 689 GQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDK 724
>gi|17978481 vacuolar protein sorting 16 isoform 3 [Homo sapiens]
Length = 695
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 7 GFLLRFFIFCSLNTLLLGGVNKIAEKICGDLKDPCK 42
G L + ++ TL+LGG NK AE++ D + P K
Sbjct: 545 GQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDK 580
>gi|21264341 spermine synthase [Homo sapiens]
Length = 366
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 18 LNTLLLGGVNKIAEKICGDLKDPCKLDMNFGSCYEV 53
++ +++ G K K CGD+ D K G CY+V
Sbjct: 221 IDQMVIDGCKKYMRKTCGDVLDNLK-----GDCYQV 251
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.144 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,716,256
Number of Sequences: 37866
Number of extensions: 133530
Number of successful extensions: 277
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 234
Number of HSP's gapped (non-prelim): 44
length of query: 99
length of database: 18,247,518
effective HSP length: 70
effective length of query: 29
effective length of database: 15,596,898
effective search space: 452310042
effective search space used: 452310042
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.