VPS16 9664

Name: VPS16	Sequence: fasta or formatted (839aa)		NCBI GI: 17978479
Description: vacuolar protein sorting 16 isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [695aa] vacuolar protein sorting 16 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 85 3 C cysteine 2.1 18 1 D aspartate 5.8 49 2 E glutamate 7.3 61 3 F phenylalanine 3.5 29 2 G glycine 5.5 46 2 H histidine 2.7 23 1 I isoleucine 3.7 31 1 K lysine 5.6 47 2 L leucine 12.9 108 3 M methionine 2.0 17 1 N asparagine 2.3 19 1 P proline 4.2 35 2 Q glutamine 5.0 42 2 R arginine 6.6 55 2 S serine 6.0 50 2 T threonine 3.5 29 2 V valine 6.3 53 3 W tryptophan 1.5 13 2 Y tyrosine 3.5 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 16 isoform 1 VPS16 0.457 vacuolar protein sorting 16 isoform 3 C14orf133 0.014 hypothetical protein LOC63894 MAP1A 0.006 microtubule-associated protein 1A TYSND1 0.004 trypsin domain containing 1 isoform a MTIF2 0.004 mitochondrial translational initiation factor 2 prec... MTIF2 0.004 mitochondrial translational initiation factor 2 prec... CYP4X1 0.004 cytochrome P450, family 4, subfamily X, polypeptide ... DSP 0.004 desmoplakin isoform II DSP 0.004 desmoplakin isoform I NSFL1C 0.004 p47 protein isoform a TYSND1 0.004 trypsin domain containing 1 isoform b GOT1 0.003 aspartate aminotransferase 1 EXOC1 0.003 exocyst complex component 1 isoform 1 EXOC1 0.003 exocyst complex component 1 isoform 1 GOLGA4 0.003 golgi autoantigen, golgin subfamily a, 4 NSFL1C 0.003 p47 protein isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.