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Search of human proteins with 166795252
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|166795252 hypothetical protein LOC23359 [Homo sapiens]
(539 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|166795252 hypothetical protein LOC23359 [Homo sapiens] 1090 0.0
gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens] 262 5e-70
gi|189027139 chromosome 9 open reading frame 61 [Homo sapiens] 185 8e-47
gi|189027135 chromosome 9 open reading frame 61 [Homo sapiens] 185 8e-47
gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens] 130 3e-30
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 53 6e-07
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 52 2e-06
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 50 5e-06
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 50 7e-06
gi|55750053 atrophin-1 [Homo sapiens] 49 1e-05
gi|55750041 atrophin-1 [Homo sapiens] 49 1e-05
gi|16933561 sarcospan isoform 1 [Homo sapiens] 49 2e-05
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 49 2e-05
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 48 3e-05
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 48 3e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 48 3e-05
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 47 3e-05
gi|146134388 YLP motif containing 1 [Homo sapiens] 47 3e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 4e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 47 4e-05
gi|4809279 annexin VII isoform 2 [Homo sapiens] 47 4e-05
gi|4502111 annexin VII isoform 1 [Homo sapiens] 47 4e-05
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 47 6e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 6e-05
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 46 8e-05
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 46 8e-05
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 46 8e-05
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 46 8e-05
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 46 1e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 1e-04
>gi|166795252 hypothetical protein LOC23359 [Homo sapiens]
Length = 539
Score = 1090 bits (2818), Expect = 0.0
Identities = 539/539 (100%), Positives = 539/539 (100%)
Query: 1 MPPAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSA 60
MPPAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSA
Sbjct: 1 MPPAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSA 60
Query: 61 RVRHSCPFWAGFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQL 120
RVRHSCPFWAGFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQL
Sbjct: 61 RVRHSCPFWAGFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQL 120
Query: 121 VNSLEGCQLIKFDSVEVCVCCELQHQSSGCSNLGETLKLNPLQENCNAVRLTLKDLLFSV 180
VNSLEGCQLIKFDSVEVCVCCELQHQSSGCSNLGETLKLNPLQENCNAVRLTLKDLLFSV
Sbjct: 121 VNSLEGCQLIKFDSVEVCVCCELQHQSSGCSNLGETLKLNPLQENCNAVRLTLKDLLFSV 180
Query: 181 CALNVLSTIVCALATAMCCMQMVSSDVLQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEF 240
CALNVLSTIVCALATAMCCMQMVSSDVLQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEF
Sbjct: 181 CALNVLSTIVCALATAMCCMQMVSSDVLQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEF 240
Query: 241 IPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEA 300
IPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEA
Sbjct: 241 IPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEA 300
Query: 301 VVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGP 360
VVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGP
Sbjct: 301 VVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGP 360
Query: 361 VGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCS 420
VGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCS
Sbjct: 361 VGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCS 420
Query: 421 QDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRSL 480
QDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRSL
Sbjct: 421 QDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRSL 480
Query: 481 VDSKAYADARVLVAKFLEHSHCALPTEAQHMVGAMRLAVTNEERLEEEAVFGADVLDQV 539
VDSKAYADARVLVAKFLEHSHCALPTEAQHMVGAMRLAVTNEERLEEEAVFGADVLDQV
Sbjct: 481 VDSKAYADARVLVAKFLEHSHCALPTEAQHMVGAMRLAVTNEERLEEEAVFGADVLDQV 539
>gi|38146116 hypothetical protein LOC10712 isoform a [Homo sapiens]
Length = 668
Score = 262 bits (670), Expect = 5e-70
Identities = 149/361 (41%), Positives = 206/361 (57%), Gaps = 24/361 (6%)
Query: 3 PAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSARV 62
P+ R+ R L+ LR + +L LG Q+ LG L+V S A ++TT+ +
Sbjct: 5 PSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTTTESI 64
Query: 63 RHSCPFWAGFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQLVN 122
+ SCP WAGFS+ SG++G+VSWKRP +LVI+FF LLS +CVML++AGS+LSC+NAQL
Sbjct: 65 KRSCPSWAGFSLAFSGVVGIVSWKRPFTLVISFFSLLSVLCVMLSMAGSVLSCKNAQLAR 124
Query: 123 SLEGCQLIKFDSVEVCVCCELQHQSSGCSNLGETLKLNPLQENCNAVRLTLKDLLFSVCA 182
+ C L +VCVCC C G+ LK+ P C+ R LK+LLFSVC
Sbjct: 125 DFQQCSL----EGKVCVCCPSVPLLRPCPESGQELKVAP-NSTCDEARGALKNLLFSVCG 179
Query: 183 LNVLSTIVCALATAMCCMQMVSSDVLQMFLPQR--SHPANPTCVT--PHGTVLHQTLDFD 238
L + + I+C L+ +CC+Q+ S D++ P+R S P P T P +LH LD +
Sbjct: 180 LTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLE 239
Query: 239 EFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPY 298
EF+PP+PPPPYYPPEYTC+ T+AQ Y+ +++SP LYP + PP Y
Sbjct: 240 EFVPPVPPPPYYPPEYTCSSETDAQ------------SITYNGSMDSPVPLYPTDCPPSY 287
Query: 299 EAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSE-GTATPGSSPSP 357
EAV+G SQ T Q+ + S ++ V DS SL++S G GSSPS
Sbjct: 288 EAVMGLRGDSQATLFDPQLHDGSCICERVAS--IVDVSMDSGSLVLSAIGDLPGGSSPSE 345
Query: 358 D 358
D
Sbjct: 346 D 346
Score = 43.1 bits (100), Expect = 6e-04
Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 344 VSEGTATPGSSPSPDGPVGAPAPSEPAL-PPGHVSPEDPGMGSQVQPGPGRVSRSTSDPT 402
V G P ++P P + S +L PPGH P P P + RS SDP
Sbjct: 443 VPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP------ASPPPLLLPRSHSDPG 496
Query: 403 LCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKT-- 460
+ TSS D + R ++ LE EA S++ + + AC +L+ P +
Sbjct: 497 ITTSS---DTADFRDLYTKVLE---EEAASVSSADTGLCSEACLFRLARCPSPKLLRARS 550
Query: 461 --DQRPTP--EPFPATSKERP-RSLVDSKAYADARVLVAKFLEHSHCA 503
+RP P + P S P SL D K R LV +FL+ S A
Sbjct: 551 AEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKA 598
>gi|189027139 chromosome 9 open reading frame 61 [Homo sapiens]
Length = 450
Score = 185 bits (470), Expect = 8e-47
Identities = 144/456 (31%), Positives = 209/456 (45%), Gaps = 81/456 (17%)
Query: 91 LVITFFMLLSAVCVMLNLAGSILSCQNAQLVNSLEGCQLIKFDSVEVCVCCELQHQSSGC 150
L++ F+LLS VCV+LNLAG IL CQ AQ V+S+ C L+ ++C CCE + Q + C
Sbjct: 3 LLVNLFVLLSVVCVLLNLAGFILGCQGAQFVSSVPRCDLVDLGEGKICFCCE-EFQPAKC 61
Query: 151 SNLGETLKLNPLQENCNAVRLTLKDLLFSVCALNVLSTIVCALATAMCCMQMVSSDVLQM 210
++ LKL P+Q C+AV L LK +LF++CALN L+T VC +A A+ LQ+
Sbjct: 62 TDKENALKLFPVQP-CSAVHLLLKKVLFALCALNALTTTVCLVAAAL--------RYLQI 112
Query: 211 FLPQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDF 270
F +RS + D D+F+PP+PPP Y+ Y+CTP +R + D
Sbjct: 113 FATRRSCIDESQISAEEAEDHGRIPDPDDFVPPVPPPSYFATFYSCTPRMN-RRMVGPDV 171
Query: 271 APSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAG 330
P P +Y I + P + PPPYEAVV Q Q +S Q++E S
Sbjct: 172 IPLPH--IYGARIKGVEVFCPLDPPPPYEAVVSQMDQEQGSSF--QMSEGSE-------- 219
Query: 331 FSTPVPADSTSLLVSEGTATP-------GSSPSPDGPVGAPAPSEPALPPGHVSPEDPGM 383
+ +P D V++ P S+ +P + P S ALPP
Sbjct: 220 -AAVIPLDLGCTQVTQDGDIPNIPAEENASTSTPSSTLVRPIRSRRALPPLR-------- 270
Query: 384 GSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATA 443
+RS SDP L S R + EA A + +A
Sbjct: 271 -----------TRSKSDPVL-------HPSEERAAPVLSCEA----ATQTERRLDLAAVT 308
Query: 444 ACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRSLVDSKAYADARVLVAKFLEHSHCA 503
R S A S+ RPRSL+D K+Y D ++LVA+FLE S C
Sbjct: 309 LRRGLRSRA--------------------SRCRPRSLIDYKSYMDTKLLVARFLEQSSCT 348
Query: 504 LPTEAQHMVGAMRLAVTNEERLEEEAVFGADVLDQV 539
+ + +V ++ + ++E EEA+ A L+Q+
Sbjct: 349 MTPDIHELVENIKSVLKSDEEHMEEAITSASFLEQI 384
>gi|189027135 chromosome 9 open reading frame 61 [Homo sapiens]
Length = 450
Score = 185 bits (470), Expect = 8e-47
Identities = 144/456 (31%), Positives = 209/456 (45%), Gaps = 81/456 (17%)
Query: 91 LVITFFMLLSAVCVMLNLAGSILSCQNAQLVNSLEGCQLIKFDSVEVCVCCELQHQSSGC 150
L++ F+LLS VCV+LNLAG IL CQ AQ V+S+ C L+ ++C CCE + Q + C
Sbjct: 3 LLVNLFVLLSVVCVLLNLAGFILGCQGAQFVSSVPRCDLVDLGEGKICFCCE-EFQPAKC 61
Query: 151 SNLGETLKLNPLQENCNAVRLTLKDLLFSVCALNVLSTIVCALATAMCCMQMVSSDVLQM 210
++ LKL P+Q C+AV L LK +LF++CALN L+T VC +A A+ LQ+
Sbjct: 62 TDKENALKLFPVQP-CSAVHLLLKKVLFALCALNALTTTVCLVAAAL--------RYLQI 112
Query: 211 FLPQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDF 270
F +RS + D D+F+PP+PPP Y+ Y+CTP +R + D
Sbjct: 113 FATRRSCIDESQISAEEAEDHGRIPDPDDFVPPVPPPSYFATFYSCTPRMN-RRMVGPDV 171
Query: 271 APSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAG 330
P P +Y I + P + PPPYEAVV Q Q +S Q++E S
Sbjct: 172 IPLPH--IYGARIKGVEVFCPLDPPPPYEAVVSQMDQEQGSSF--QMSEGSE-------- 219
Query: 331 FSTPVPADSTSLLVSEGTATP-------GSSPSPDGPVGAPAPSEPALPPGHVSPEDPGM 383
+ +P D V++ P S+ +P + P S ALPP
Sbjct: 220 -AAVIPLDLGCTQVTQDGDIPNIPAEENASTSTPSSTLVRPIRSRRALPPLR-------- 270
Query: 384 GSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATA 443
+RS SDP L S R + EA A + +A
Sbjct: 271 -----------TRSKSDPVL-------HPSEERAAPVLSCEA----ATQTERRLDLAAVT 308
Query: 444 ACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPRSLVDSKAYADARVLVAKFLEHSHCA 503
R S A S+ RPRSL+D K+Y D ++LVA+FLE S C
Sbjct: 309 LRRGLRSRA--------------------SRCRPRSLIDYKSYMDTKLLVARFLEQSSCT 348
Query: 504 LPTEAQHMVGAMRLAVTNEERLEEEAVFGADVLDQV 539
+ + +V ++ + ++E EEA+ A L+Q+
Sbjct: 349 MTPDIHELVENIKSVLKSDEEHMEEAITSASFLEQI 384
>gi|38146118 hypothetical protein LOC10712 isoform b [Homo sapiens]
Length = 572
Score = 130 bits (327), Expect = 3e-30
Identities = 76/189 (40%), Positives = 105/189 (55%), Gaps = 19/189 (10%)
Query: 175 DLLFSVCALNVLSTIVCALATAMCCMQMVSSDVLQMFLPQRS--HPANPTCVT--PHGTV 230
+LLFSVC L + + I+C L+ +CC+Q+ S D++ P+RS P P T P +
Sbjct: 76 NLLFSVCGLTICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPL 135
Query: 231 LHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLY 290
LH LD +EF+PP+PPPPYYPPEYTC+ T+AQ Y+ +++SP LY
Sbjct: 136 LHTMLDLEEFVPPVPPPPYYPPEYTCSSETDAQ------------SITYNGSMDSPVPLY 183
Query: 291 PAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSE-GTA 349
P + PP YEAV+G SQ T Q+ + S ++ V DS SL++S G
Sbjct: 184 PTDCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVAS--IVDVSMDSGSLVLSAIGDL 241
Query: 350 TPGSSPSPD 358
GSSPS D
Sbjct: 242 PGGSSPSED 250
Score = 52.8 bits (125), Expect = 8e-07
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 3 PAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSARV 62
P+ R+ R L+ LR + +L LG Q+ LG L+V S A ++TT+ +
Sbjct: 5 PSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTTTESI 64
Query: 63 RHSCPFWAGFSVLLSGLIGV 82
+ SCP WAGFS LL + G+
Sbjct: 65 KRSCPSWAGFSNLLFSVCGL 84
Score = 43.1 bits (100), Expect = 6e-04
Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 344 VSEGTATPGSSPSPDGPVGAPAPSEPAL-PPGHVSPEDPGMGSQVQPGPGRVSRSTSDPT 402
V G P ++P P + S +L PPGH P P P + RS SDP
Sbjct: 347 VPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP------ASPPPLLLPRSHSDPG 400
Query: 403 LCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKT-- 460
+ TSS D + R ++ LE EA S++ + + AC +L+ P +
Sbjct: 401 ITTSS---DTADFRDLYTKVLE---EEAASVSSADTGLCSEACLFRLARCPSPKLLRARS 454
Query: 461 --DQRPTP--EPFPATSKERP-RSLVDSKAYADARVLVAKFLEHSHCA 503
+RP P + P S P SL D K R LV +FL+ S A
Sbjct: 455 AEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKA 502
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 53.1 bits (126), Expect = 6e-07
Identities = 77/315 (24%), Positives = 113/315 (35%), Gaps = 46/315 (14%)
Query: 194 ATAMCCMQMVSSDVLQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPE 253
A A+ +V V +S P T +TP + D+ PP PPP Y+PP
Sbjct: 684 APALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQE--SPVISKDQSPPPSPPPSYHPPP 741
Query: 254 Y-TCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPP-PYEAVVGQ----PPA 307
T P + APS T + + P +P PP P E + PP
Sbjct: 742 PPTKKPEVVVE-------APSASETAEE-PLQDPN--WPPPPPPAPEEQDLSMADFPPPE 791
Query: 308 SQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPS 367
S+ SG P + PA S+S + PGS PD P PAP+
Sbjct: 792 EAFFSVASPEPAGPSGSPELVSS-----PAASSSSATALQIQPPGS---PDPPPAPPAPA 843
Query: 368 EPALPPGHVS--PEDPGMGSQVQPGPGRVS----------------RSTSDPTLCTSSMA 409
+ PGHV+ P+ +G GP R RS P +
Sbjct: 844 PASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPAL 903
Query: 410 GDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPF 469
G ++ +P + +G + VP +S +A L+ + + + + P EP
Sbjct: 904 GPSAPQKP--LRRALSGRASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPR 961
Query: 470 PATSKERPRSLVDSK 484
P S S + SK
Sbjct: 962 PPQSPASTASFIFSK 976
Score = 33.5 bits (75), Expect = 0.51
Identities = 45/166 (27%), Positives = 60/166 (36%), Gaps = 23/166 (13%)
Query: 243 PLPPPPY--YPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEA 300
P PP P + P + S R +PS + Y +P L PP
Sbjct: 549 PCPPNPANSWVPGLSPGGSRRPPRSPERTLSPS---SGYSSQSGTPTLPPKGLAGPPASP 605
Query: 301 VVGQPPASQ-VTSIGQQVAESSSGDPNTSAGFSTPVPADST--SLLVSEGT--------- 348
QPP + VTS+ A SS + + S P P+D + +L G
Sbjct: 606 GKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPK 665
Query: 349 -----ATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQP 389
+ P S P P APA + PA+ PG VS D S P
Sbjct: 666 VPAPFSPPPSKPRSPNP-AAPALAAPAVVPGPVSTTDASPQSPPTP 710
Score = 30.4 bits (67), Expect = 4.3
Identities = 40/151 (26%), Positives = 51/151 (33%), Gaps = 39/151 (25%)
Query: 334 PVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPSE----PALPPGHVSPEDPGMGSQ--- 386
P P T L G A P DGP+G P E P LP + G G+
Sbjct: 498 PPPPRRTHSLHQRGLAVP------DGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCP 551
Query: 387 ----------VQPGPGR---------------VSRSTSDPTLCTSSMAGDASSHRPSCSQ 421
+ PG R S + PTL +AG +S +
Sbjct: 552 PNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPP 611
Query: 422 DLEAGLSEAVPGSASMSRSATAACRAQLSPA 452
E S PG AS+S S T+ C + PA
Sbjct: 612 KPERVTSLRSPG-ASVSSSLTSLCSSSSDPA 641
Score = 29.3 bits (64), Expect = 9.5
Identities = 49/181 (27%), Positives = 63/181 (34%), Gaps = 32/181 (17%)
Query: 320 SSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPSE--------PAL 371
++ G A P PA+S +S G GS P P +PS P L
Sbjct: 538 TTGGSEGAGAAPCPPNPANSWVPGLSPG----GSRRPPRSPERTLSPSSGYSSQSGTPTL 593
Query: 372 PPGHVSPEDPGMGSQVQPGPGRV--------SRSTSDPTLCTSSMAGDASSHRPSCSQDL 423
PP ++ G P P RV S S+S +LC+SS + A S R
Sbjct: 594 PPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSS-SDPAPSDRSGPQILT 652
Query: 424 EAGLSEAVP----------GSASMSRSATAACRAQLSPAGDP-DTWKTDQRPTPEPFPAT 472
G +P S RS A A +PA P TD P P P T
Sbjct: 653 PLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQT 712
Query: 473 S 473
+
Sbjct: 713 T 713
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 51.6 bits (122), Expect = 2e-06
Identities = 58/206 (28%), Positives = 82/206 (39%), Gaps = 31/206 (15%)
Query: 293 ELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPG 352
++PP EA P + TS + E S G TS+G T S + L ++TPG
Sbjct: 460 DVPPSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPG 519
Query: 353 SSPSPDGPVGAPAPSEPALP---------PGHVSPEDPGMGSQVQPGPGRVSRSTSD-PT 402
P + +PA P PG P PG+G+ P S T+ P
Sbjct: 520 GPPGAENSTS----HQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPE 575
Query: 403 LCTSS----MAGDASSHRPS-----CSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAG 453
TS G ++SH+P+ +Q EAG S+ +P S S +P G
Sbjct: 576 PGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTS-----HQPTTPGG 630
Query: 454 DPDTWKTDQRPTPEPFPATSKERPRS 479
T +T + T +P P SK P S
Sbjct: 631 --GTAQTPEPGTSQPMP-LSKSTPSS 653
Score = 30.0 bits (66), Expect = 5.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 351 PGSSPSPDG-PVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTS 406
P SP+ D P AP P+EPA PPG SP P P +R+ PT S
Sbjct: 728 PVPSPTHDPKPAEAPMPAEPA-PPGPASPGG-------APEPPAAARAGGSPTAVRS 776
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 50.1 bits (118), Expect = 5e-06
Identities = 47/160 (29%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSP-GLLYPAELPPPYEA 300
PP PPPP P P E Q L P P Y + + P G LPP
Sbjct: 172 PPRPPPPVRPVPQGTPPVVEEQPQPPLAMPPYPLP--YSPSPSLPVGPTAHGALPPAPFP 229
Query: 301 VVGQP--------PASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATP- 351
VV QP P +G + A S P S P P + + + G P
Sbjct: 230 VVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSM---PPRPGYPGTPMGASGPGYPL 286
Query: 352 --GSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQP 389
G +PSP P +P P+ PP + P+ P Q QP
Sbjct: 287 RGGRAPSPGYPQQSPYPATGGKPPYPIQPQLPSFPGQPQP 326
Score = 36.2 bits (82), Expect = 0.078
Identities = 45/162 (27%), Positives = 54/162 (33%), Gaps = 29/162 (17%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAV 301
PPL PPY P Y+ +PS H P+PF + S Y L P Y A
Sbjct: 196 PPLAMPPY-PLPYSPSPSLPVGPTAHGALPPAPFPVV------SQPSFYSGPLGPTYPAA 248
Query: 302 -VGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEG-------TATPGS 353
+G A+ + Q+ G P T G S P S G AT G
Sbjct: 249 QLGPRGAAGYSWSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSPGYPQQSPYPATGGK 308
Query: 354 --------------SPSPDGPVGAPAPSEPALPPGHVSPEDP 381
P P P+ P P PA P G P P
Sbjct: 309 PPYPIQPQLPSFPGQPQPSVPLQPPYPPGPAPPYGFPPPPGP 350
Score = 31.2 bits (69), Expect = 2.5
Identities = 37/129 (28%), Positives = 42/129 (32%), Gaps = 41/129 (31%)
Query: 244 LPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVVG 303
+PP P YP TP + G L +P SPG YP + PY A G
Sbjct: 266 MPPRPGYPG----TPMGASGPGYPLRGGRAP----------SPG--YPQQ--SPYPATGG 307
Query: 304 QPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPVGA 363
+PP Q S G P S P P P P P G
Sbjct: 308 KPPYPI-----QPQLPSFPGQPQPSVPLQPPYP------------------PGPAPPYGF 344
Query: 364 PAPSEPALP 372
P P PA P
Sbjct: 345 PPPPGPAWP 353
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 49.7 bits (117), Expect = 7e-06
Identities = 83/318 (26%), Positives = 110/318 (34%), Gaps = 59/318 (18%)
Query: 212 LPQRSHPANPTCVTPHGTVL----HQTLDFDEFIPPLPPPPYYP---------PEYTCTP 258
LP ++ PT V G V D +PPL P P P P T TP
Sbjct: 1291 LPLAANQVPPTMVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTP 1350
Query: 259 STEAQRGLHLDFAPSPFGTLY------------DVAINSPG---------LLYPAELPPP 297
L AP P TL +V+ ++PG L P+ LP P
Sbjct: 1351 GRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGP 1410
Query: 298 YEAVVGQPPASQVTS-IGQQVAESSSGDPNTSAGFSTPVPAD-------STSLLVS-EGT 348
+ + P +S + S + V+ S S + P PA S L VS G
Sbjct: 1411 ASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGP 1470
Query: 349 ATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTL----C 404
A S P PV AP P+L P SP + + P S T L
Sbjct: 1471 ALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPT 1530
Query: 405 TSSMAGDASSHRPSCSQDLEAGLSEA---------VPGSASM---SRSATAACRAQLSPA 452
+S + G S+ P+CS L + A P AS+ + SA+ A L+P
Sbjct: 1531 SSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPM 1590
Query: 453 GDPDTWKTDQRPTPEPFP 470
P T P P P
Sbjct: 1591 AAPQTAILAPSPAPPLAP 1608
Score = 37.0 bits (84), Expect = 0.046
Identities = 72/268 (26%), Positives = 97/268 (36%), Gaps = 36/268 (13%)
Query: 216 SHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPF 275
S PA T VTP +P P PP P +PS A L L APS
Sbjct: 1468 SGPALLTSVTP---------PLAPVVPAAPGPPSLAPS-GASPSASALT-LGLATAPSLS 1516
Query: 276 GTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPV 335
+ +PG +P L P V G V S+ P SA P
Sbjct: 1517 SS------QTPG--HPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSA----PN 1564
Query: 336 PADSTSLLVSEGTATPGSSPSPDGPVGAP-----APS-EPALPPGHVSPEDPG----MGS 385
PA + + L++ ++ + +P P+ AP APS P L P V PG + S
Sbjct: 1565 PAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLAS 1624
Query: 386 QVQPGPGRVSRSTSDPTLCTSS-MAGDASSHRPSCSQD-LEAGLSEAVPGSASMSRSATA 443
P P ST +L ++S + PS +Q L A + +P AS A A
Sbjct: 1625 SQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALA 1684
Query: 444 ACRAQLSPAGDPDTWKTDQRPTPE-PFP 470
A P + P+ PFP
Sbjct: 1685 PALAPTLGGSSPSQTLSLGTGNPQGPFP 1712
Score = 33.5 bits (75), Expect = 0.51
Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 16/132 (12%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAV 301
PPL P PP P + G PSP G L G P P P ++
Sbjct: 1058 PPLIPASR-PPGPVLLPPLQPNSGSLPQVLPSPLGVL-------SGTSRP---PTPTLSL 1106
Query: 302 VGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPV 361
PPA S SS P T T PA +T+ + TAT + P+P
Sbjct: 1107 KPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAP---- 1162
Query: 362 GAPAPSEPALPP 373
PAP L P
Sbjct: 1163 -TPAPQRLILSP 1173
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 48.9 bits (115), Expect = 1e-05
Identities = 80/286 (27%), Positives = 108/286 (37%), Gaps = 56/286 (19%)
Query: 245 PPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQ 304
PPP +P S A +A SP +L + PG PA LPPP+ V
Sbjct: 510 PPPGAFPHPLEGGSSHHAH-----PYAMSP--SLGSLRPYPPG---PAHLPPPHSQV--- 556
Query: 305 PPASQVTSIGQQVAESSSGDPNTSAGFST------------------PVPADSTS-LLVS 345
SQ G V+ SS+ +TS G PVP +TS +S
Sbjct: 557 -SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLS 615
Query: 346 EGTATPGSSP------SPDGP--VGAPAPS----EPALPPGHVSPEDPGMGSQVQPGPGR 393
AT SSP SP GP G APS + A PPG+ P + PG
Sbjct: 616 TVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPG--- 672
Query: 394 VSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGL-SEAVPGSASMSRSATAACRAQLSPA 452
R TS P + G + +GL S P +A S +A + + PA
Sbjct: 673 -YRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPA 731
Query: 453 GDPDTWKTDQRPTPEPFPATSKERPRSLVDSKAYADARVLVAKFLE 498
+ ++T + P P PA S P +VD ++A K L+
Sbjct: 732 ---EEYETPESPVP---PARSPSPPPKVVDVPSHASQSARFNKHLD 771
Score = 47.8 bits (112), Expect = 3e-05
Identities = 65/247 (26%), Positives = 86/247 (34%), Gaps = 52/247 (21%)
Query: 243 PLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPG---LLYPAELPPPYE 299
P PPP +PP ST Q + PS T Y + P P PPP+
Sbjct: 158 PYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHP 217
Query: 300 --------AVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATP 351
V+ PP A SS G PN G P P S+ S + P
Sbjct: 218 QLYPGGTGGVLSGPPMGPKGG----GAASSVGGPN--GGKQHPPPTTPISVSSSGASGAP 271
Query: 352 GSSPSPDGPVG------APAPSE-----PALPP-------GHVSPEDPGMGSQVQPG--- 390
+ P P PVG AP P+ P LPP + S PG+G+Q PG
Sbjct: 272 PTKP-PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLP 330
Query: 391 -------------PGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASM 437
PG T P+ + A ++ P + S A S+S
Sbjct: 331 SPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSS 390
Query: 438 SRSATAA 444
S S++A+
Sbjct: 391 SSSSSAS 397
Score = 33.9 bits (76), Expect = 0.39
Identities = 46/189 (24%), Positives = 65/189 (34%), Gaps = 22/189 (11%)
Query: 236 DFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLD-FAPSP------FGTLYDVAINSPGL 288
+F P LPPPP P + S L PSP G L P L
Sbjct: 293 NFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTL 352
Query: 289 LYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGT 348
PP + PP S + ++S ++S+ ++P PA
Sbjct: 353 APSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSF 412
Query: 349 ATPGSSPSPDGPVGAPAPSEPALPPGHV----SPEDPGMG-----SQVQPG---PGRVSR 396
P S + P P ++P+LP V P P G S PG P ++
Sbjct: 413 PPPTSLSVSNQP---PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ 469
Query: 397 STSDPTLCT 405
ST+ P + T
Sbjct: 470 STAHPPVST 478
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 48.9 bits (115), Expect = 1e-05
Identities = 80/286 (27%), Positives = 108/286 (37%), Gaps = 56/286 (19%)
Query: 245 PPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQ 304
PPP +P S A +A SP +L + PG PA LPPP+ V
Sbjct: 510 PPPGAFPHPLEGGSSHHAH-----PYAMSP--SLGSLRPYPPG---PAHLPPPHSQV--- 556
Query: 305 PPASQVTSIGQQVAESSSGDPNTSAGFST------------------PVPADSTS-LLVS 345
SQ G V+ SS+ +TS G PVP +TS +S
Sbjct: 557 -SYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLS 615
Query: 346 EGTATPGSSP------SPDGP--VGAPAPS----EPALPPGHVSPEDPGMGSQVQPGPGR 393
AT SSP SP GP G APS + A PPG+ P + PG
Sbjct: 616 TVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPG--- 672
Query: 394 VSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGL-SEAVPGSASMSRSATAACRAQLSPA 452
R TS P + G + +GL S P +A S +A + + PA
Sbjct: 673 -YRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPA 731
Query: 453 GDPDTWKTDQRPTPEPFPATSKERPRSLVDSKAYADARVLVAKFLE 498
+ ++T + P P PA S P +VD ++A K L+
Sbjct: 732 ---EEYETPESPVP---PARSPSPPPKVVDVPSHASQSARFNKHLD 771
Score = 47.8 bits (112), Expect = 3e-05
Identities = 65/247 (26%), Positives = 86/247 (34%), Gaps = 52/247 (21%)
Query: 243 PLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPG---LLYPAELPPPYE 299
P PPP +PP ST Q + PS T Y + P P PPP+
Sbjct: 158 PYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHP 217
Query: 300 --------AVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATP 351
V+ PP A SS G PN G P P S+ S + P
Sbjct: 218 QLYPGGTGGVLSGPPMGPKGG----GAASSVGGPN--GGKQHPPPTTPISVSSSGASGAP 271
Query: 352 GSSPSPDGPVG------APAPSE-----PALPP-------GHVSPEDPGMGSQVQPG--- 390
+ P P PVG AP P+ P LPP + S PG+G+Q PG
Sbjct: 272 PTKP-PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLP 330
Query: 391 -------------PGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASM 437
PG T P+ + A ++ P + S A S+S
Sbjct: 331 SPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSS 390
Query: 438 SRSATAA 444
S S++A+
Sbjct: 391 SSSSSAS 397
Score = 33.9 bits (76), Expect = 0.39
Identities = 46/189 (24%), Positives = 65/189 (34%), Gaps = 22/189 (11%)
Query: 236 DFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLD-FAPSP------FGTLYDVAINSPGL 288
+F P LPPPP P + S L PSP G L P L
Sbjct: 293 NFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTL 352
Query: 289 LYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGT 348
PP + PP S + ++S ++S+ ++P PA
Sbjct: 353 APSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSF 412
Query: 349 ATPGSSPSPDGPVGAPAPSEPALPPGHV----SPEDPGMG-----SQVQPG---PGRVSR 396
P S + P P ++P+LP V P P G S PG P ++
Sbjct: 413 PPPTSLSVSNQP---PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ 469
Query: 397 STSDPTLCT 405
ST+ P + T
Sbjct: 470 STAHPPVST 478
>gi|16933561 sarcospan isoform 1 [Homo sapiens]
Length = 243
Score = 48.5 bits (114), Expect = 2e-05
Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 16/198 (8%)
Query: 1 MPPAGGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSA 60
M P G AP+ R C G R L L Q+ALG + V F ++++S
Sbjct: 27 MEPKKGTGAPKECGEEEP----RTCCG-CRFPLLLALLQLALGIAVTVVGFLMASISSSL 81
Query: 61 RVRHSCPFWAGFSVLLSGLIGV----VSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQ 116
VR + PFWAG V L +G+ VS++ I F M L + +L+ G + C
Sbjct: 82 LVRDT-PFWAGIIVCLVAYLGLFMLCVSYQVDERTCIQFSMKL--LYFLLSALG-LTVCV 137
Query: 117 NAQLVNSLEGCQLIKFDSVEVCVCCELQHQSSGCSNLGETLKLNPLQENCNAVRLTLKDL 176
A + QL +F C+ + SS L T + + C +V T K
Sbjct: 138 LAVAFAAHHYSQLTQFTCETTLDSCQCKLPSS--EPLSRTFVYRDVTD-CTSVTGTFKLF 194
Query: 177 LFSVCALNVLSTIVCALA 194
L LN++ +VC LA
Sbjct: 195 LLIQMILNLVCGLVCLLA 212
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 48.5 bits (114), Expect = 2e-05
Identities = 68/264 (25%), Positives = 95/264 (35%), Gaps = 56/264 (21%)
Query: 252 PEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPP---PYEAVVGQPPAS 308
PE + A+ G L PSP L+ VA+ SP P PP P G+P
Sbjct: 200 PEACSSAERRARAGPFL--TPSP---LHAVAMRSPR---PCGRPPTDSPDAGGAGRPLDG 251
Query: 309 QVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLV-------SEGTATPGSSPSPDGPV 361
++++ ++ +G P TS G + P S+ S G+A P PS +
Sbjct: 252 YISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERVG 311
Query: 362 GAP-----------------APSEPALPPGHVSPED-------------PGMGSQVQPGP 391
G P A EPA PP SP D PG + + P
Sbjct: 312 GHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLP 371
Query: 392 GRVSRSTSDPTLCTSSMAGDASSHRPSCS----QDLEAGLSEAVPGSASMSRSATAAC-- 445
GR +R P S+ RP + + EA P + SRS +
Sbjct: 372 GRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLL 431
Query: 446 -RAQLSPAGDPDTWKTDQRPTPEP 468
RA P+G P + T +R P P
Sbjct: 432 GRASAVPSG-PPKYPTAEREEPRP 454
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 47.8 bits (112), Expect = 3e-05
Identities = 59/221 (26%), Positives = 72/221 (32%), Gaps = 43/221 (19%)
Query: 191 CALATAMCCMQMVSSDVLQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYY 250
CA + A M S L + P +PT P LH T D PLPPPP Y
Sbjct: 585 CAPSLAQLAMDACS-------LLDETPPQSPTRALPRP--LHPTPVVDWDARPLPPPPAY 635
Query: 251 PP------EYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVV-- 302
++ G + PS T Y A PPP E +
Sbjct: 636 DDVAQDEDDFEICSINSTLVGAGVPAGPSQGQTNYAFVPEQ------ARPPPPLEDNLFL 689
Query: 303 -----GQPPAS-QVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPS 356
G+PP+S Q I Q + + AG P P+ PG
Sbjct: 690 PPQGGGKPPSSAQTAEIFQALQQECMRQLQAPAGSPAPSPS-------------PGGDDK 736
Query: 357 PDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQ-PGPGRVSR 396
P P P P P P +SP PG Q PGP R
Sbjct: 737 PQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPASPPR 777
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 47.8 bits (112), Expect = 3e-05
Identities = 59/221 (26%), Positives = 72/221 (32%), Gaps = 43/221 (19%)
Query: 191 CALATAMCCMQMVSSDVLQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYY 250
CA + A M S L + P +PT P LH T D PLPPPP Y
Sbjct: 663 CAPSLAQLAMDACS-------LLDETPPQSPTRALPRP--LHPTPVVDWDARPLPPPPAY 713
Query: 251 PP------EYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVV-- 302
++ G + PS T Y A PPP E +
Sbjct: 714 DDVAQDEDDFEICSINSTLVGAGVPAGPSQGQTNYAFVPEQ------ARPPPPLEDNLFL 767
Query: 303 -----GQPPAS-QVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPS 356
G+PP+S Q I Q + + AG P P+ PG
Sbjct: 768 PPQGGGKPPSSAQTAEIFQALQQECMRQLQAPAGSPAPSPS-------------PGGDDK 814
Query: 357 PDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQ-PGPGRVSR 396
P P P P P P +SP PG Q PGP R
Sbjct: 815 PQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPASPPR 855
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.8 bits (112), Expect = 3e-05
Identities = 44/151 (29%), Positives = 54/151 (35%), Gaps = 18/151 (11%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAV 301
PP PPP PP + P + + P P + V PG P V
Sbjct: 73 PPQQPPPQQPPPHQPPPHPQPHQ--QQQPPPPPQDSSKPVVAQGPG---------PAPGV 121
Query: 302 VGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPV 361
PPAS S +SG P S TP P + + + A P + PS P
Sbjct: 122 GSAPPAS---SSAPPATPPTSGAPPGSGPGPTPTPPPAVTS--APPGAPPPTPPSSGVPT 176
Query: 362 GAPAPSEPALPPGHVSPEDPGMGSQVQPGPG 392
P P PP V PG G + PGPG
Sbjct: 177 TPPQAGGPPPPPAAVP--GPGPGPKQGPGPG 205
Score = 43.1 bits (100), Expect = 6e-04
Identities = 41/150 (27%), Positives = 54/150 (36%), Gaps = 31/150 (20%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAV 301
PP+PPPP + + P P P P P P P++
Sbjct: 58 PPIPPPPPHQQQQQPPPQQ-----------PPP---------QQPPPHQPPPHPQPHQQQ 97
Query: 302 VGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGT--ATPGSSPSPDG 359
QPP S VA+ P + G + PA S++ + T A PGS P G
Sbjct: 98 --QPPPPPQDSSKPVVAQG----PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGP---G 148
Query: 360 PVGAPAPSEPALPPGHVSPEDPGMGSQVQP 389
P P P+ + PPG P P G P
Sbjct: 149 PTPTPPPAVTSAPPGAPPPTPPSSGVPTTP 178
Score = 38.1 bits (87), Expect = 0.021
Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 18/111 (16%)
Query: 291 PAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTAT 350
P + PPP + QPP QQ P P DS+ +V++G
Sbjct: 73 PPQQPPPQQPPPHQPPPHPQPHQQQQ---------------PPPPPQDSSKPVVAQG--- 114
Query: 351 PGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDP 401
PG +P A + + PA PP +P G G P P S P
Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP 165
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 47.4 bits (111), Expect = 3e-05
Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 18/201 (8%)
Query: 291 PAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVP---ADSTSLLVSEG 347
P L PP +A P + ++ ++ + + + P P A + S +
Sbjct: 433 PPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKA 492
Query: 348 TATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSS 407
+A P + P P APS P +P VSP P S + P P + + TS PT +
Sbjct: 493 SAVP-APPQKTPPPSQKAPSVPTIPQKAVSPTAPKKKSLLLPAPSQKALPTS-PTEYQMA 550
Query: 408 MAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTD------ 461
++ AS + D+ L +PG A + RS + + P T +TD
Sbjct: 551 LSPPASRGKLPGDFDV---LPTGIPGRAVLERSQSG---GKPEPVVTVRTQETDVVEMTT 604
Query: 462 QRPTPE-PFPATSKERPRSLV 481
Q +PE PF T KE L+
Sbjct: 605 QAKSPESPFTVTKKESKDILI 625
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 47.4 bits (111), Expect = 3e-05
Identities = 61/204 (29%), Positives = 73/204 (35%), Gaps = 36/204 (17%)
Query: 241 IPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLY---PAELPPP 297
+PP PPP PP P+T G+ P T P L P LPPP
Sbjct: 538 LPPSLPPPVMPP---ALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPP 594
Query: 298 YEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSP 357
+ G PP S+ SS+ P P+P +S T PG P P
Sbjct: 595 SLSSAGPPPVLPPPSL------SSTAPPPV-----MPLPP------LSSATPPPG-IPPP 636
Query: 358 DGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRP 417
P G P P L V P SQV P R PT + A + H P
Sbjct: 637 GVPQGIP----PQLTAAPVPPASSSQSSQVPEKP----RPALLPTPVSFGSAPPTTYHPP 688
Query: 418 SCSQDLEAGLSEAVPGSASMSRSA 441
S AG SE V A +S+SA
Sbjct: 689 LQS----AGPSEQVNSKAPLSKSA 708
Score = 41.2 bits (95), Expect = 0.002
Identities = 70/285 (24%), Positives = 93/285 (32%), Gaps = 59/285 (20%)
Query: 245 PPPPYYPP--------------EYTCTPSTEAQRGLHLDFAPSPFGTLYDV--------- 281
PPPP PP + TP+ + G + F L +
Sbjct: 15 PPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGF-MSFREQHLAQLQQLQQMHQKQMQ 73
Query: 282 AINSPGLLYPAELPPPYEAVVG-----QPP--------------ASQVTSIGQQVAESSS 322
+ P L P LPPP G QPP Q Q +
Sbjct: 74 CVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRD 133
Query: 323 GDPN------TSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHV 376
G P S S PVP S + S+ P P P P S+P LPP
Sbjct: 134 GPPGLVPMELESPPESPPVPPGS-YMPPSQSYMPP---PQPPPSYYPPTSSQPYLPPAQP 189
Query: 377 SP-EDPGMGSQVQPGPGRVSRSTSDPTLCTSSM----AGDASSHRPSCSQDLEAGLSEAV 431
SP + P S + P P S S+S + + S + AS RPS ++ L
Sbjct: 190 SPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHS-KSQLLAPP 248
Query: 432 PGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKER 476
P SA T S A + T + P P+P T +E+
Sbjct: 249 PPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQ 293
Score = 35.8 bits (81), Expect = 0.10
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 29/110 (26%)
Query: 242 PPLPPPPYYPPEYTCTPSTEA-------------------QRGLHLDFAPSPFGTLYDVA 282
PP PPPP PP P T A ++GL+ +F A
Sbjct: 1548 PPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSE------TAA 1601
Query: 283 INSPGLLYP----AELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTS 328
I S +L P + +PPP +G PP S+ + Q V D +T+
Sbjct: 1602 IPSAPVLPPPPVHSSIPPPGPVPMGMPPMSKPPPVQQTVDYGHGRDISTN 1651
Score = 33.1 bits (74), Expect = 0.66
Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 46/135 (34%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAV 301
PP PPP YYPP T +Q L P P++ PP +
Sbjct: 167 PPQPPPSYYPP-------TSSQPYL------------------PPAQPSPSQSPPSQSYL 201
Query: 302 VGQPPASQVTSIGQQ-VAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGP 360
P S +S Q ++ S S P++ A S P S S L+
Sbjct: 202 APTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLL---------------- 245
Query: 361 VGAPAPSEPALPPGH 375
AP P+ PPG+
Sbjct: 246 ----APPPPSAPPGN 256
Score = 32.3 bits (72), Expect = 1.1
Identities = 54/246 (21%), Positives = 76/246 (30%), Gaps = 32/246 (13%)
Query: 242 PPLPPPPYYP-------PEYTC--TPSTEAQRGLHLDFAPSPFGTLYDVAI----NSPGL 288
PP+PPPP P Y+ TP+ + G + F L + +
Sbjct: 17 PPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGF-MSFREQHLAQLQQLQQMHQKQMQCV 75
Query: 289 LYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGT 348
L P LPPP PP + G GD P P + S +
Sbjct: 76 LQPHHLPPP-----PLPPPPVMPGGGY-------GDWQPPPPPMPPPPGPALSYQKQQQY 123
Query: 349 ATPGSSPSPDGPVGA------PAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPT 402
DGP G P P +PPG P QP P ++S P
Sbjct: 124 KHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPY 183
Query: 403 LCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQ 462
L + + S S + S + + +S S + +Q SP+ Q
Sbjct: 184 LPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQ 243
Query: 463 RPTPEP 468
P P
Sbjct: 244 LLAPPP 249
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.0 bits (110), Expect = 4e-05
Identities = 66/266 (24%), Positives = 95/266 (35%), Gaps = 44/266 (16%)
Query: 213 PQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPP---PYYPPEY-----TCTPSTEAQR 264
P S A P+ P+ +H L F PP PP P+ PP + TP ++A
Sbjct: 415 PPLSPLATPSPQAPNALAVH--LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP 472
Query: 265 GLH---LDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAV---VGQPPASQVTSIGQQVA 318
L L PSP + SP P + PPP A + +PP ++
Sbjct: 473 SLAAPPLQVPPSPPAS----PPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPL 528
Query: 319 ESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSS-------------PSPDGPVGAPA 365
++ P+ A F P ++ L ATP PSP A
Sbjct: 529 QAL---PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 585
Query: 366 PSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDL-- 423
P P P S P + + PGP + TL +AG +SS S ++L
Sbjct: 586 PRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSS-ATSTPEELRG 644
Query: 424 -----EAGLSEAVPGSASMSRSATAA 444
E G + + P A ++ AA
Sbjct: 645 YDSGPEGGAAASPPPDAELAACHPAA 670
Score = 41.6 bits (96), Expect = 0.002
Identities = 80/307 (26%), Positives = 101/307 (32%), Gaps = 68/307 (22%)
Query: 219 ANPTC-VTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGT 277
A PT TPH + L T +P PP P PP PS A PS T
Sbjct: 317 APPTLPATPHSSSL--TCQLATPLPLAPPSPSAPPSLQTLPSPPAT-------PPSQATT 367
Query: 278 LYDVAINSPGL-----------LYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPN 326
++ SP L L P PPP PPA + + Q S P
Sbjct: 368 ----SLGSPTLQATHSFLPSPPLSPLATPPPQ-----APPALALPPL--QAPPSPPASPP 416
Query: 327 TSAGFSTPVPADSTSLLVS--EGTATPGSSP---SPDGPVGAPAPSEPALPPGHVSPEDP 381
S +TP P +L V + +P SP +P P +P S A PP P
Sbjct: 417 LSP-LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA 475
Query: 382 GMGSQVQPGPGR---VSRSTSDPTLCTSSMAG---DASSHRPSCSQDLEAGLSEAV---- 431
QV P P +S S + P +A + P L +A+
Sbjct: 476 APPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPP 535
Query: 432 ---PGSASMSRSAT-----------------AACRAQLSPAGDPDTWKTDQRPTPEPFPA 471
PG A S SA+ AA Q+ P+ R P P P
Sbjct: 536 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPD 595
Query: 472 TSKERPR 478
TS PR
Sbjct: 596 TSVSGPR 602
Score = 41.2 bits (95), Expect = 0.002
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 15/187 (8%)
Query: 294 LPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNT------SAGFSTPVPADSTSLLVSEG 347
LP P + +PP +E S+ +P+ SAG PA S SL
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA-SRSL---SS 244
Query: 348 TATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSS 407
+ATP SSP+ GP P PA P P+ G+ ++P R + P L S
Sbjct: 245 SATPLSSPARSGPSARGTPRAPAHPS---QPKPKGL-QALRPPQVTPPRKDAAPALGPLS 300
Query: 408 MAGDASSHRPSCSQDLEAGLSEAVPGSASMS-RSATAACRAQLSPAGDPDTWKTDQRPTP 466
+ A+ + Q A P S+S++ + AT A SP+ P P
Sbjct: 301 SSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPAT 360
Query: 467 EPFPATS 473
P AT+
Sbjct: 361 PPSQATT 367
Score = 39.7 bits (91), Expect = 0.007
Identities = 60/223 (26%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGL---LYPAELPPPY 298
PP PP P PS A L P G D +++ P L L P PPP
Sbjct: 559 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP--DTSVSGPRLTLALAPGPPPPPS 616
Query: 299 EA---VVGQPP----ASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATP 351
+ + P +S TS +++ SG P A S P A+ + + + P
Sbjct: 617 RSPSSTLSGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASPPPDAELAACHPAAWSRGP 675
Query: 352 GSSPSPDGPVGAPAPSEPALPPGHVSP-----EDPGMGSQVQPGPGRVSRSTSDPTLCTS 406
+ G GAP P PA PG E G S P PG + S T
Sbjct: 676 APPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPES-ATPAPGALDPGPSPGTSGGK 734
Query: 407 SMAG---DASSHRPSCSQ--DLEAGLSEAVPGSASMSRSATAA 444
+ AG ASS P ++ +L G +A +SR+ A
Sbjct: 735 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLA 777
Score = 38.9 bits (89), Expect = 0.012
Identities = 64/246 (26%), Positives = 83/246 (33%), Gaps = 42/246 (17%)
Query: 241 IPPL---PPPPYYPP-EYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPP 296
+PPL P PP PP TPS +A L + +PF PP
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS------------------PP 443
Query: 297 PYEAVVG--QPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSS 354
P V PPAS + S P+ +A P+ S +S P +
Sbjct: 444 PSPPVQAPFSPPAS--PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 501
Query: 355 PSP-DGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDAS 413
P P P A P PP +P + S PG+ S S S +
Sbjct: 502 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPS-----ASLPMSPLA 556
Query: 414 SHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQR------PTPE 467
+ P L A L + VP S S + A R P PDT + R P P
Sbjct: 557 TPPPQAPPVLAAPLLQ-VPPSPPASPTLQAPRR---PPTPGPDTSVSGPRLTLALAPGPP 612
Query: 468 PFPATS 473
P P+ S
Sbjct: 613 PPPSRS 618
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 47.0 bits (110), Expect = 4e-05
Identities = 66/266 (24%), Positives = 95/266 (35%), Gaps = 44/266 (16%)
Query: 213 PQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPP---PYYPPEY-----TCTPSTEAQR 264
P S A P+ P+ +H L F PP PP P+ PP + TP ++A
Sbjct: 376 PPLSPLATPSPQAPNALAVH--LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP 433
Query: 265 GLH---LDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAV---VGQPPASQVTSIGQQVA 318
L L PSP + SP P + PPP A + +PP ++
Sbjct: 434 SLAAPPLQVPPSPPAS----PPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPL 489
Query: 319 ESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSS-------------PSPDGPVGAPA 365
++ P+ A F P ++ L ATP PSP A
Sbjct: 490 QAL---PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 546
Query: 366 PSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDL-- 423
P P P S P + + PGP + TL +AG +SS S ++L
Sbjct: 547 PRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSS-ATSTPEELRG 605
Query: 424 -----EAGLSEAVPGSASMSRSATAA 444
E G + + P A ++ AA
Sbjct: 606 YDSGPEGGAAASPPPDAELAACHPAA 631
Score = 39.7 bits (91), Expect = 0.007
Identities = 60/223 (26%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGL---LYPAELPPPY 298
PP PP P PS A L P G D +++ P L L P PPP
Sbjct: 520 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP--DTSVSGPRLTLALAPGPPPPPS 577
Query: 299 EA---VVGQPP----ASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATP 351
+ + P +S TS +++ SG P A S P A+ + + + P
Sbjct: 578 RSPSSTLSGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASPPPDAELAACHPAAWSRGP 636
Query: 352 GSSPSPDGPVGAPAPSEPALPPGHVSP-----EDPGMGSQVQPGPGRVSRSTSDPTLCTS 406
+ G GAP P PA PG E G S P PG + S T
Sbjct: 637 APPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPES-ATPAPGALDPGPSPGTSGGK 695
Query: 407 SMAG---DASSHRPSCSQ--DLEAGLSEAVPGSASMSRSATAA 444
+ AG ASS P ++ +L G +A +SR+ A
Sbjct: 696 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLA 738
Score = 38.9 bits (89), Expect = 0.012
Identities = 64/246 (26%), Positives = 83/246 (33%), Gaps = 42/246 (17%)
Query: 241 IPPL---PPPPYYPP-EYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPP 296
+PPL P PP PP TPS +A L + +PF PP
Sbjct: 363 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS------------------PP 404
Query: 297 PYEAVVG--QPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSS 354
P V PPAS + S P+ +A P+ S +S P +
Sbjct: 405 PSPPVQAPFSPPAS--PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 462
Query: 355 PSP-DGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDAS 413
P P P A P PP +P + S PG+ S S S +
Sbjct: 463 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPS-----ASLPMSPLA 517
Query: 414 SHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQR------PTPE 467
+ P L A L + VP S S + A R P PDT + R P P
Sbjct: 518 TPPPQAPPVLAAPLLQ-VPPSPPASPTLQAPRR---PPTPGPDTSVSGPRLTLALAPGPP 573
Query: 468 PFPATS 473
P P+ S
Sbjct: 574 PPPSRS 579
Score = 38.5 bits (88), Expect = 0.016
Identities = 72/283 (25%), Positives = 91/283 (32%), Gaps = 65/283 (22%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGL-----------LY 290
P PP P PP PS A PS T ++ SP L L
Sbjct: 300 PSAPPSPSAPPSLQTLPSPPAT-------PPSQATT----SLGSPTLQATHSFLPSPPLS 348
Query: 291 PAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVS--EGT 348
P PPP PPA + + Q S P S +TP P +L V +
Sbjct: 349 PLATPPPQ-----APPALALPPL--QAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAP 400
Query: 349 ATPGSSP---SPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGR---VSRSTSDPT 402
+P SP +P P +P S A PP P QV P P +S S + P
Sbjct: 401 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 460
Query: 403 LCTSSMAG---DASSHRPSCSQDLEAGLSEAV-------PGSASMSRSAT---------- 442
+A + P L +A+ PG A S SA+
Sbjct: 461 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 520
Query: 443 -------AACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPR 478
AA Q+ P+ R P P P TS PR
Sbjct: 521 PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPR 563
Score = 34.7 bits (78), Expect = 0.23
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 15/135 (11%)
Query: 294 LPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNT------SAGFSTPVPADSTSLLVSEG 347
LP P + +PP +E S+ +P+ SAG PA S SL
Sbjct: 180 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA-SRSL---SS 235
Query: 348 TATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQP--GPGRVSRSTSDPTLCT 405
+ATP SSP+ GP P PA P P+ G+ + P P R + + L +
Sbjct: 236 SATPLSSPARSGPSARGTPRAPAHPS---QPKPKGLQALRPPQVTPPRKDAAPALGPLSS 292
Query: 406 SSMAGDASSHRPSCS 420
S +A + S PS S
Sbjct: 293 SPLATPSPSAPPSPS 307
>gi|4809279 annexin VII isoform 2 [Homo sapiens]
Length = 488
Score = 47.0 bits (110), Expect = 4e-05
Identities = 40/110 (36%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 290 YPAELPPPYEAVVGQPPASQVTSI---GQQVAESSSGDPNTSAGFSTPVPADSTSLLVSE 346
YP P Y G PPA Q +S GQ SG P G VP S+ +
Sbjct: 3 YPGYPPTGYPPFPGYPPAGQESSFPPSGQY--PYPSGFPPMGGGAYPQVP--SSGYPGAG 58
Query: 347 GTATPGSSPSPDGPVGAP----APSEPALPPGH---VSPEDPGMGSQVQP 389
G PG P+P G GAP APS P +PPG V P G QP
Sbjct: 59 GYPAPGGYPAPGGYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQP 108
>gi|4502111 annexin VII isoform 1 [Homo sapiens]
Length = 466
Score = 47.0 bits (110), Expect = 4e-05
Identities = 40/110 (36%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 290 YPAELPPPYEAVVGQPPASQVTSI---GQQVAESSSGDPNTSAGFSTPVPADSTSLLVSE 346
YP P Y G PPA Q +S GQ SG P G VP S+ +
Sbjct: 3 YPGYPPTGYPPFPGYPPAGQESSFPPSGQY--PYPSGFPPMGGGAYPQVP--SSGYPGAG 58
Query: 347 GTATPGSSPSPDGPVGAP----APSEPALPPGH---VSPEDPGMGSQVQP 389
G PG P+P G GAP APS P +PPG V P G QP
Sbjct: 59 GYPAPGGYPAPGGYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQP 108
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 46.6 bits (109), Expect = 6e-05
Identities = 68/239 (28%), Positives = 84/239 (35%), Gaps = 34/239 (14%)
Query: 235 LDFDEFIPPLPP---PPYYPPEYTCTPSTEAQRG--LHLDFAPSPFGTLYDVAINSPGLL 289
L PP P PP P Y P Q LH P P + +S L
Sbjct: 978 LQHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQD--PLPAHSGALP 1035
Query: 290 YPAELPP-PYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGT 348
+P+ PP P + PA +G Q A + P+ SAG STP P LV
Sbjct: 1036 FPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPS-SAGQSTPSPH-----LVPSPA 1089
Query: 349 ATPGSSPSPDGPVGAPAPSEPALPPGHV-------SPEDPGMGSQVQPGPGRVSRSTSDP 401
+PG P P P A P P L G SPE G+Q PG G+
Sbjct: 1090 PSPGPGPVPPRPPAAEPP--PCLRRGAAAADLLSSSPESQHGGTQ-SPGGGQ-------- 1138
Query: 402 TLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDT-WK 459
L + A RP + +E E P + A R QL G DT W+
Sbjct: 1139 PLLQPTKVDAAEGRRPQALRLIERDPYEH-PERLRQLQQELEAFRGQLGDVGALDTVWR 1196
Score = 33.5 bits (75), Expect = 0.51
Identities = 40/155 (25%), Positives = 57/155 (36%), Gaps = 19/155 (12%)
Query: 242 PPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPP----P 297
P L P P Y PE P + Q G+ SP+ V P P+ PP P
Sbjct: 819 PALYPAPAYTPELGLVPRSSPQHGV----VSSPY---VGVGPAPPVAGLPSAPPPQFSGP 871
Query: 298 YEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTP-VPADSTSLLVSEGTATPGSSPS 356
A+ +P + V SI + ++ PN + P P L + T G+
Sbjct: 872 ELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQ- 930
Query: 357 PDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGP 391
P+ A +P G +P +G Q QP P
Sbjct: 931 ---PIPAQHHFSSGIPAGFPAPR---IGPQPQPHP 959
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.6 bits (109), Expect = 6e-05
Identities = 73/281 (25%), Positives = 98/281 (34%), Gaps = 38/281 (13%)
Query: 221 PTCVTPHGTVLH-QTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTL- 278
P +P T TL IP P P PP T P T+ G+ A +P +
Sbjct: 709 PVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGT-PPGTKKVDGISHTSALAPVASSP 767
Query: 279 ---------YDVAINSPGLL-YPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTS 328
+S G L Y A+ P P V T G S P+T
Sbjct: 768 KECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKG-------SAGPDTP 820
Query: 329 AG-FSTPV--------PADSTSLLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPE 379
G S+PV P +S S S+ + SP+P P GAP PS A+ P +SP+
Sbjct: 821 IGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPS--AVTP--LSPK 876
Query: 380 DPGMGSQVQPGPGRVSR--STSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASM 437
+ + P P V+ P A S S + + +P S S
Sbjct: 877 GVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSP 936
Query: 438 SRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERPR 478
+ T SP G P T PTP PA + P+
Sbjct: 937 KGAPTPPAATPPSPKGGPATPSPKWAPTP---PAATPPSPK 974
Score = 44.7 bits (104), Expect = 2e-04
Identities = 63/250 (25%), Positives = 88/250 (35%), Gaps = 26/250 (10%)
Query: 246 PPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSP--GLLYPAELPP------- 296
PP PP P+T + +G A +P A SP PA PP
Sbjct: 965 PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 297 --PYEAVVGQPPASQVTSIGQQVAESS--SGDPNTSAGFSTPVPADSTSLLVSEGTATPG 352
P+ PPA+ S A + G P T A + P P + +G TP
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAA-TLPSPKGGPATPSLKGAPTPP 1083
Query: 353 SS--PSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAG 410
++ PSP G P+P +PP +P P G P G + + P S G
Sbjct: 1084 AATPPSPKGGPATPSPKGAPMPPA-ATPPSPKGGLATPPHKG----APTTPAATPPSPKG 1138
Query: 411 DASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTD-QRPTPEPF 469
++ P + A A P S + A +PA P + K P+P+
Sbjct: 1139 GLATPPPKGAPTTPA----ATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGA 1194
Query: 470 PATSKERPRS 479
P T P S
Sbjct: 1195 PTTPAATPPS 1204
Score = 44.7 bits (104), Expect = 2e-04
Identities = 64/266 (24%), Positives = 87/266 (32%), Gaps = 27/266 (10%)
Query: 245 PPPPYYPPEYTCTP-------STEAQRGLHLDFAPSPFGTLYDVAINSP--GLLYPAELP 295
PPP P TP +T + +G A +P +A SP PA P
Sbjct: 1166 PPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1225
Query: 296 PPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPG--- 352
P + + P + S G P T P P +T + G ATP
Sbjct: 1226 PSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKG 1285
Query: 353 -------SSPSPDG------PVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTS 399
+ PSP G P GAP P P SP P P
Sbjct: 1286 APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345
Query: 400 DPTLCTSSMAGDASSHRPSCSQ-DLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTW 458
PTL ++ + PS + + + G +M+ + A SP GDP T
Sbjct: 1346 TPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDP-TS 1404
Query: 459 KTDQRPTPEPFPATSKERPRSLVDSK 484
+P+ PAT R + SK
Sbjct: 1405 PAVIPLSPKKAPATPVTREGAATPSK 1430
Score = 43.1 bits (100), Expect = 6e-04
Identities = 61/268 (22%), Positives = 91/268 (33%), Gaps = 40/268 (14%)
Query: 246 PPPYYPPEYTCTPSTEAQRGLHLDFA---PSPFGTL----YDVAINSPGLLYPAE----L 294
PP PP P+T + +G + A PSP G L + A +P P+
Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLA 1141
Query: 295 PPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSA--------GFSTPVPADSTSLLVSE 346
PP + P A+ + G G P T A G +TP P + + +
Sbjct: 1142 TPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1201
Query: 347 ------GTATPG----------SSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPG 390
G ATP + PSP G + P+P P +P P G P
Sbjct: 1202 PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA-ATPPSPKGGPATPPP 1260
Query: 391 PGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLS 450
G + + P +A P+ + + + P ++ + T S
Sbjct: 1261 KGAPTPPAATPPSLKGGLATPPHKGAPNPAV-VTPPSPKGGPATSPPKGAPTPPAATPPS 1319
Query: 451 PAGDPDTWKTDQRPTPEPFPATSKERPR 478
P G P T PTP PA + P+
Sbjct: 1320 PKGSPGTPPPKGAPTP---PAVTPPSPK 1344
Score = 40.8 bits (94), Expect = 0.003
Identities = 54/217 (24%), Positives = 74/217 (34%), Gaps = 16/217 (7%)
Query: 259 STEAQRGLHLDFAPSPFGTLYDVAIN--SPG--LLYPAELPPPYEAVVGQPPASQVTSIG 314
S ++ H PSP G A+ SP L P E P P + P T
Sbjct: 846 SKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAP 905
Query: 315 QQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSS--PSPDGPVGAPAPSEPALP 372
+Q S + +TP P + +G TP ++ PSP G P+P P
Sbjct: 906 KQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTP 965
Query: 373 PGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVP 432
P P G P P + + P S G ++ P + A P
Sbjct: 966 PAATPPSP--KGGPATPSP---KGAPTPPAATPPSPKGGPATPSPKGAPTPPA----VTP 1016
Query: 433 GSASMSRSATAACR-AQLSPAGDPDTWKTDQRPTPEP 468
S S +AT + A PA P + K TP P
Sbjct: 1017 PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP 1053
Score = 40.0 bits (92), Expect = 0.005
Identities = 79/311 (25%), Positives = 107/311 (34%), Gaps = 56/311 (18%)
Query: 213 PQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFA- 271
P + P NP VTP + P PP PP +P T +G A
Sbjct: 1282 PHKGAP-NPAVVTPPSPKGGPATSPPKGAPT--PPAATPPSPKGSPGTPPPKGAPTPPAV 1338
Query: 272 --PSPFGTLYDVAIN-----SPGLLYPAELPPPYEAVV---GQPPASQVTSIGQQVAESS 321
PSP GT A P E P P A G P + + S
Sbjct: 1339 TPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP 1398
Query: 322 SGDPNTSAGFSTPVPADSTSLLVSEGTATPGS---------------SPSPDGPVGAPA- 365
GDP + A + + EG ATP +P+ P G PA
Sbjct: 1399 KGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPAT 1458
Query: 366 ------PSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSD---PTLCTSSMAGDASSHR 416
P+ PA+ P SP++P P P +V+ S+S P A +
Sbjct: 1459 PSSKGDPTLPAVTPP--SPKEP-------PAPKQVATSSSPKKAPATPAPMGAPTLPAVI 1509
Query: 417 PSCSQDLEAGLSEA----VPGSASMSRS--ATAACRAQLSPAGD--PDTWKTDQRPTPEP 468
PS +++ A S P + +S+ AT A + L P P KT PTP+
Sbjct: 1510 PSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKE 1569
Query: 469 FPATSKERPRS 479
PAT + S
Sbjct: 1570 APATPSSKEAS 1580
Score = 34.7 bits (78), Expect = 0.23
Identities = 50/226 (22%), Positives = 82/226 (36%), Gaps = 30/226 (13%)
Query: 203 VSSDVLQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEFI-PPLPPP------PYYPPEYT 255
++S L++ PQ S P GT I PP+ P P P
Sbjct: 73 IASTPLEVPFPQSSSGT----ALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLK 128
Query: 256 CTPSTEAQRGL----------HLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQP 305
TPS+ A L F P+ + VA+ G + P +
Sbjct: 129 GTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAP-----IAPSE 183
Query: 306 PASQVTSIGQQVAESSSGDPNTSAGFST-PVPADSTSLLVSEGTAT-PGSSPSPDGPVGA 363
P + + + +V + G P+ ST P + + G A+ P ++P+ + +
Sbjct: 184 PKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIAS 243
Query: 364 PAPSEPALPPGHVSPEDPGMGSQVQP--GPGRVSRSTSDPTLCTSS 407
P + + +SP++PG S P P +S ST + TSS
Sbjct: 244 PQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSS 289
Score = 34.3 bits (77), Expect = 0.30
Identities = 65/281 (23%), Positives = 99/281 (35%), Gaps = 42/281 (14%)
Query: 221 PTCVTPHGTVLHQTLDFDEFIPPLPPP-PYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLY 279
P P G + D +P + PP P PP ++ + + AP TL
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP 1506
Query: 280 DVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSA--------GF 331
V +SP E+P P+S+ I S P T A
Sbjct: 1507 AVIPSSP-----KEVPAT--------PSSRRDPIAPTATLLSKKTPATLAPKEALIPPAM 1553
Query: 332 STPVPADSTSLLV-SEGTATPGSSPSPDGPV-------GAPAPSEPALPPGHVSP---ED 380
+ P P + ++ E ATP S + P GAP+P E +PP SP E
Sbjct: 1554 TVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEA 1613
Query: 381 PGMGSQVQPGPGR-----VSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSA 435
P + P P + + T T S D+ + S + + A + +A G
Sbjct: 1614 PTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLP 1673
Query: 436 SMSRSATAACRAQLSPAGDPD---TWKTDQRPTPEPFPATS 473
+ + TA ++PA + T T + P + ATS
Sbjct: 1674 A-KKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATS 1713
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 46.2 bits (108), Expect = 8e-05
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 22/179 (12%)
Query: 296 PPYEAVVGQPPASQVTSI-------GQQVAESSSGDPNTSAGFSTPVPADSTSLLVS--- 345
P + G P + +T + G S +G P+T++ P A T +L
Sbjct: 362 PSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSI 421
Query: 346 ---EGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPT 402
+ TA+P +P P G P + P P SP G+Q P S ST+ PT
Sbjct: 422 TKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASP----TGTQSTASP-TGSPSTASPT 476
Query: 403 LCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAA----CRAQLSPAGDPDT 457
S+ + S R S ++ + +AS++R+ + A + SP G P T
Sbjct: 477 GSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASPTGSPST 535
Score = 42.4 bits (98), Expect = 0.001
Identities = 59/280 (21%), Positives = 98/280 (35%), Gaps = 54/280 (19%)
Query: 218 PANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGT 277
P+ P+ +P GT +L TPST + + + SP G
Sbjct: 278 PSRPSTASPTGTPSRASLSM-------------------TPSTASL--MRMLPRASPTGM 316
Query: 278 LYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPA 337
L ++ PP ++ P S+ + G+ S +G P+ ++ +P A
Sbjct: 317 LSRTSLTKMDSTASISRTPPRASITRTP--SRASPTGKPSTASPTGTPSRASPTGSPSTA 374
Query: 338 DSTSLLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSP------------------- 378
T L TA+P +P P G P+ + P SP
Sbjct: 375 SLTGL---SSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPT 431
Query: 379 EDPGMGSQVQPGP-----GRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPG 433
P S P G SR++ T T+S G S+ P+ S + P
Sbjct: 432 RTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGS--PS 489
Query: 434 SASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATS 473
AS++R+ + A ++ +T R +P P+T+
Sbjct: 490 RASLTRTPSRASLTKMESTA--SITRTPSRASPTWTPSTA 527
Score = 37.4 bits (85), Expect = 0.035
Identities = 67/283 (23%), Positives = 96/283 (33%), Gaps = 57/283 (20%)
Query: 243 PLPPPPYYPPEYTCTPSTEAQRGLHLDFAP---SPFGTLYDVAINSPGLLYPAELPPPYE 299
P PP P T TPST + L P SP G L +I PP
Sbjct: 385 PTGTPPRASP--TGTPSTAS-----LTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRA 437
Query: 300 AVVGQPPA-------SQVTSIGQQVAESSSGDPNTSAGFSTPVPADST------------ 340
+ G PP S+ + G Q S +G P+T++ +P A T
Sbjct: 438 SPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLTRTP 497
Query: 341 ---SLLVSEGTAT------------------PGSSPSPDGPVGAPAPSEPALPPGHVS-P 378
SL E TA+ P SPS +G+P+ + P S
Sbjct: 498 SRASLTKMESTASITRTPSRASPTWTPSTASPTGSPSTALAMGSPSRAALTRTPSRASLT 557
Query: 379 EDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDAS----SHRPSCSQDLEAGLSEAVPGS 434
P S P ++R+ S T+ + M AS R S + + L + +
Sbjct: 558 RTPSRASLTTPSRASLTRTPS--TVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDST 615
Query: 435 ASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEPFPATSKERP 477
AS++R+ A + P P PT P A+ P
Sbjct: 616 ASITRTPPRASPTETPPRASPTGTPPRASPTGTPPRASPTGTP 658
Score = 31.6 bits (70), Expect = 1.9
Identities = 47/189 (24%), Positives = 63/189 (33%), Gaps = 17/189 (8%)
Query: 303 GQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLL----------VSEGTATPG 352
G PP + T G S S P+T+ TP A T +L + T TP
Sbjct: 222 GTPPRASPT--GSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTASITRTP- 278
Query: 353 SSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCTSSMAGDA 412
S PS P G P+ + ++ P S + R S + D T S A
Sbjct: 279 SRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRA 338
Query: 413 S----SHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTPEP 468
S R S + P AS + S + A LS P PT P
Sbjct: 339 SITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTP 398
Query: 469 FPATSKERP 477
A+ +P
Sbjct: 399 STASLTRKP 407
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 46.2 bits (108), Expect = 8e-05
Identities = 63/277 (22%), Positives = 99/277 (35%), Gaps = 29/277 (10%)
Query: 245 PPPPYYPPEYTCTPSTEAQRGLHLDFAPSP---FGTLYDVAINSPGLLYPAELPPPYEAV 301
PP + P P ++ G + AP P T V + +PG PA +P E
Sbjct: 11 PPRRHGAPAAPSPPPRGSRAGPVVVVAPGPPVTTATSAPVTLVAPGEARPAWVPGSAETS 70
Query: 302 VGQP-----PASQVTSIGQQV----AESSSGDPNTSAGFSTPVPAD----STSLLVSEGT 348
P PA VT V A + P +G +P PA TS ++ G
Sbjct: 71 APAPAPAPAPAPAVTGSTVVVLTLEASPEAPKPQLPSGPESPEPAAVAGVETSRALAAGA 130
Query: 349 -------ATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDP 401
A P +P P P G P + PG ++ + P + P PG S
Sbjct: 131 DSPKTEEARPSPAPGPGTPTGTPTRTPSRTAPGALTAKPP-----LAPKPGTTVASGVTA 185
Query: 402 TLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTD 461
+ + G + + + +A + PG+ ++PA +P D
Sbjct: 186 RSASGQVTGGHGAAAATSASAGQAPEDPSGPGTGPSGTCEAPVAVVTVTPAPEPAENSQD 245
Query: 462 QRPTPEPFPATSKERPRSLVDSKAYADARVLVAKFLE 498
T P S R ++ D+ +Y D+ L++ LE
Sbjct: 246 LGSTSSLGPGISGPRGQA-PDTLSYLDSVSLMSGTLE 281
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 46.2 bits (108), Expect = 8e-05
Identities = 54/191 (28%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 292 AELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATP 351
AE P P EA PP ++S+ + ++ S+ + + P S LL G + P
Sbjct: 1319 AEHPAP-EAPESSPPLP-LSSLPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGPSNP 1376
Query: 352 -GSSPSPDGPVGAPA---PSEPALPPGHVSPEDPGMGSQVQPG-PGRVSRSTSDPTLCTS 406
G+ P+P P P P + A P PE P G+ Q G PG TS+ L TS
Sbjct: 1377 PGAPPAPLAPSSPPVTALPQDGAAPATSTMPE-PASGTASQAGGPGTPQGLTSE--LETS 1433
Query: 407 SMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPTP 466
+ + P Q L GL+ P + S +A R L P P P
Sbjct: 1434 QPLAE-THEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPP------------PAP 1480
Query: 467 EPFPATSKERP 477
EP P + +P
Sbjct: 1481 EPSPHSGTPQP 1491
Score = 44.3 bits (103), Expect = 3e-04
Identities = 45/151 (29%), Positives = 54/151 (35%), Gaps = 13/151 (8%)
Query: 241 IPPLPPPPYYPPEY----TCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPP 296
+PP+PPP Y+ P P A L L P +A+ ++ A
Sbjct: 825 VPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATI 884
Query: 297 PYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPAD---STSLLVSEGTATPGS 353
P AV PP SI VA+ G P A F P D S V ATP
Sbjct: 885 PLLAVA--PPGVAALSIHSAVAQ-LPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQ 941
Query: 354 SPSPDGPVGAP---APSEPALPPGHVSPEDP 381
P P P P +P LPP V P P
Sbjct: 942 PALPPQPTLPPQPVLPPQPTLPPQPVLPPQP 972
Score = 29.6 bits (65), Expect = 7.3
Identities = 73/304 (24%), Positives = 100/304 (32%), Gaps = 60/304 (19%)
Query: 190 VCALATAMCCMQMVSSDVLQMFLPQRSHPANPTCVTPHGTVLHQ-------------TLD 236
V AL+ Q+ V PQ + P +PH TV + TL
Sbjct: 894 VAALSIHSAVAQLPGQPVYPAAFPQMAPTDVPP--SPHHTVQNMRATPPQPALPPQPTLP 951
Query: 237 FDEFIPP---LPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGL-LYPA 292
+PP LPP P PP+ T P P P V P L + P
Sbjct: 952 PQPVLPPQPTLPPQPVLPPQPTRPPQPV--------LPPQPMLPPQPVLPPQPALPVRPE 1003
Query: 293 ELPP--PYEAVVGQPPASQVTSIGQQ-------VAESSSGDPNTSAGFSTPVPADSTSLL 343
L P P +A P SQ+ +G A+ + +A S P+P +L
Sbjct: 1004 PLQPHLPEQAAPAATPGSQIL-LGHPAPYAVDVAAQVPTVPVPPAAVLSPPLP----EVL 1058
Query: 344 VSEGTATPGSSPSPDGPVGAPAPSEPA-----LPPGHVS-PEDPGMGS-----QVQPGPG 392
+ PS V A S P LPP + P PG+ S Q+ P
Sbjct: 1059 LPAAPELLPQFPSSLATVSASVQSVPTQTATLLPPANPPLPGGPGIASPCPTVQLTVEPV 1118
Query: 393 RVSRSTSD-----PTLCTSSMAGDASSHR---PSCSQDLEAGLSEAVPGSASMSRSATAA 444
+ +++ D P C S D +S + SC G E RS A
Sbjct: 1119 QEEQASQDKPPGLPQSCESYGGSDVTSGKELSDSCEGAFGGGRLEGRAARKHHRRSTRAR 1178
Query: 445 CRAQ 448
R +
Sbjct: 1179 SRQE 1182
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 46.2 bits (108), Expect = 8e-05
Identities = 52/193 (26%), Positives = 73/193 (37%), Gaps = 30/193 (15%)
Query: 241 IPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYE- 299
+PP P PP T +P + GL L P P + V + L+ LPPP E
Sbjct: 1518 VPPPSPRRSVPPSPT-SPRASEENGLPLLVLPPPAPS---VDVEDGEFLFVEPLPPPLEF 1573
Query: 300 ----------AVVGQP--------PASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTS 341
G P PA+ + + ++ P + S+ DS
Sbjct: 1574 SNSFEKPESPLTPGPPHPLPDTPAPATPLPPVPPPAV--AAAPPTLDSTASSLTSYDSEV 1631
Query: 342 LLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDP 401
+++G + P P GP AP+ A PG P PG S ++ SRS+SD
Sbjct: 1632 ATLTQGASAAPGDPHPPGPPAPAAPAPAAPQPGPDPP--PGTDSGIEEVD---SRSSSDH 1686
Query: 402 TLCTSSMAGDASS 414
L T S A SS
Sbjct: 1687 PLETISSASTLSS 1699
Score = 39.7 bits (91), Expect = 0.007
Identities = 67/276 (24%), Positives = 91/276 (32%), Gaps = 45/276 (16%)
Query: 243 PLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPG---LLYPAELPPPYE 299
P PPP P Y P T H P L+ + P L Y A L +
Sbjct: 1374 PQPPPRPPSPRYEAPPPTPHHHSPHAHH--EPVLRLWGASPPDPARRELGYRAGLGSQEK 1431
Query: 300 AVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDG 359
++ PPA++ + + + P T+ G LL+ GT P P
Sbjct: 1432 SLPASPPAARRSLLHRL--------PPTAPGVGP--------LLLQLGTEPPAPHPGVSK 1475
Query: 360 PVGAPAPSEPALPPGHV---------SPEDPGMGSQVQPGPG--RVSRSTSDPTLCTSSM 408
P + AP EP P HV +P G G + GPG S S P TS
Sbjct: 1476 PWRSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPTSPR 1535
Query: 409 AGDASS------HRPSCSQDLEAG-------LSEAVPGSASMSRSATAACRAQLSPAGDP 455
A + + P+ S D+E G L + S S + + P D
Sbjct: 1536 ASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDT 1595
Query: 456 DTWKTDQRPTPEPFPATSKERPRSLVDSKAYADARV 491
T P P P A + S S D+ V
Sbjct: 1596 PAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEV 1631
Score = 36.2 bits (82), Expect = 0.078
Identities = 50/203 (24%), Positives = 68/203 (33%), Gaps = 7/203 (3%)
Query: 291 PAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTAT 350
P LP + P + VTS +E G P S S VP TS SE
Sbjct: 1485 PERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRS--VPPSPTSPRASEENGL 1542
Query: 351 P-----GSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDPTLCT 405
P +PS D G EP PP S S + PGP T P
Sbjct: 1543 PLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPL 1602
Query: 406 SSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGDPDTWKTDQRPT 465
+ A + P + L+ A++++ A+AA P P
Sbjct: 1603 PPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAAPAPAAPQ 1662
Query: 466 PEPFPATSKERPRSLVDSKAYAD 488
P P P + VDS++ +D
Sbjct: 1663 PGPDPPPGTDSGIEEVDSRSSSD 1685
Score = 35.0 bits (79), Expect = 0.17
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 261 EAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAES 320
E Q+G L APSP SP + PPP A + + + +I + A S
Sbjct: 1119 EPQKGGGLPPAPSP---------TSPA----SPQPPPAVAAPSEKNSIPIPTIIIK-APS 1164
Query: 321 SSGDPNTSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPED 380
+S +S G ST T + G GSSPSP P +P P P+ P SP
Sbjct: 1165 TSSSGRSSQGSSTEA-EPPTQPEPTGGGGGGGSSPSP-APAMSPVPPSPSPVPTPASPSG 1222
Query: 381 P 381
P
Sbjct: 1223 P 1223
Score = 32.7 bits (73), Expect = 0.86
Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 30/130 (23%)
Query: 284 NSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLL 343
++PG YP +L P + G+ + S P S G PV S ++
Sbjct: 1741 STPGPPYPPQLMTPSKLR------------GRALGASGGLRPGPSGGLRDPVTPTSPTVS 1788
Query: 344 VSEGTATPG-------SSPSPDGPVGAPAPSEPALP----------PGHVSPEDPGMGSQ 386
V+ G T G S P G G P EP +P P + P + G G
Sbjct: 1789 VT-GAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPP 1847
Query: 387 VQPGPGRVSR 396
P PG +++
Sbjct: 1848 PPPLPGPLAQ 1857
Score = 29.3 bits (64), Expect = 9.5
Identities = 35/156 (22%), Positives = 51/156 (32%), Gaps = 36/156 (23%)
Query: 291 PAELPPPYEAVVGQPPASQVTSIGQQVAE------------------------SSSGDPN 326
P PPP + QP AS + ++ + S G +
Sbjct: 1844 PGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGGGD 1903
Query: 327 TSAGFSTPVPADSTSLLVSEGTATPGSSPSPDGPVGA-----PAPSEPALPPGHVSPEDP 381
+ G ++ VP + TS L + + S PV + P P P LP G
Sbjct: 1904 SHHGGASYVP-ERTSSLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTG------T 1956
Query: 382 GMGSQVQPGPGRVSRSTSDPTLCTSSMAGDASSHRP 417
G+ PG S S S + T + G RP
Sbjct: 1957 GVSPTAAAAPGATSPSASSSSTSTRHLQGVEFEMRP 1992
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 45.8 bits (107), Expect = 1e-04
Identities = 56/217 (25%), Positives = 73/217 (33%), Gaps = 55/217 (25%)
Query: 232 HQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINS------ 285
H T F + P+ P PY PPE PS + A P G L A NS
Sbjct: 678 HYTSVFIKDFLPVVPHPYEPPE----PSFDTVAR----DASQPNGVLRRRAENSTAKPFK 729
Query: 286 ------PGLLYPAELPPPYEAVVGQPPASQVTSIGQQ---------------VAESSSGD 324
PG L P V + P + + Q SS
Sbjct: 730 RTEIRLPGALALGRRPEVTSRVRARGPGGENRDVEAQRLVPDGDGRTSPLGGARSSSQRS 789
Query: 325 PNTSAGFSTPVPAD-----STSLLVSEGTATPGSSPSPDGPVGAPAPSEP---------- 369
P AG +P P S S ++ TP ++P P V AP P EP
Sbjct: 790 PVGPAGVRSPRPGSPQMQASPSPGIAPKPKTPPTAPEPAAAVQAPLPREPLALAGRTAPA 849
Query: 370 -----ALPPGHVSPEDPGMGSQVQPGPGRVSRSTSDP 401
+ PP SP+ P G++ QPG + + DP
Sbjct: 850 QPRAASAPPTDRSPQSPSQGARRQPGAAPLGKVLVDP 886
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 45.8 bits (107), Expect = 1e-04
Identities = 66/257 (25%), Positives = 81/257 (31%), Gaps = 31/257 (12%)
Query: 239 EFIPPLPPPPYYPPEYTCTPSTE-AQRGLHLDFAPSPF------GTLYDVAINSPGLLYP 291
E + P P P PP TP AQ+ H P P L PG + P
Sbjct: 292 ESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKP 351
Query: 292 AELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTATP 351
PP QP Q +E S + + P T P
Sbjct: 352 PVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTP------AQQP 405
Query: 352 GSSPSPDGPVGAPAP-------SEPALPPGH----VSPEDPGMGSQVQPGPGRVSRSTSD 400
G + P VG P P PA PG V PG Q GPG+ S +
Sbjct: 406 GPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTG 465
Query: 401 PTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSA---SMSRSATAACRAQLSPAGDPDT 457
PT S + G A +P Q A PGSA S +T Q PA P
Sbjct: 466 PTKPPSQLPGPA---KPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA-KPSP 521
Query: 458 WKTDQRPTPEPFPATSK 474
+ P P ++K
Sbjct: 522 QQPGSTKPPSQQPGSAK 538
Score = 42.4 bits (98), Expect = 0.001
Identities = 62/264 (23%), Positives = 84/264 (31%), Gaps = 27/264 (10%)
Query: 212 LPQRSHPANPTCVTPHGTVLHQTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFA 271
LP S + P +LD PP PPPP PP
Sbjct: 2376 LPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPP---------------P 2420
Query: 272 PSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGF 331
P P L P +L +L P VT++ S+G P T
Sbjct: 2421 PPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICT 2480
Query: 332 STPVPADSTSLLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGP 391
+ P P + G P P P AP P P LP P D + P P
Sbjct: 2481 TAPPPVPPKPSSIPSGLVFT-HRPEPSKPPIAPKPVIPQLPTTTQKPTD------IHPKP 2533
Query: 392 GRVSRSTSDPTLCTSSMAGDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSP 451
+S ++S T ++ A PS + L +++ P S S + T S
Sbjct: 2534 TGLSLTSS----MTLNLVTSADYKLPSPTSPLSPHSNKSSP-RFSKSLTETYVVITLPSE 2588
Query: 452 AGDPDTWKTDQRPTPEPFPATSKE 475
G P Q T P + SK+
Sbjct: 2589 PGTPTDSSASQAITSWPLGSPSKD 2612
Score = 37.7 bits (86), Expect = 0.027
Identities = 34/124 (27%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 286 PGLLYPAELPPPYEAVVGQP-----PASQVTSIGQQVAESS--SGDPNTSAGFSTPVPAD 338
PGL PA+ P P + V QP PA Q G+ A+ + + P+ G + P P
Sbjct: 425 PGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGP-GKTSAQQTGPTKPPSQLPGPAKPPPQQ 483
Query: 339 STSLLVSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPGMGSQVQPGPGRVSRST 398
PGS+ P G+ P P SP+ PG PG S
Sbjct: 484 PGP--AKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSA 541
Query: 399 SDPT 402
P+
Sbjct: 542 QQPS 545
Score = 32.3 bits (72), Expect = 1.1
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 297 PYEAVVGQPPASQVTS--------IGQQVAESS--SGDPNTSAGFSTPVPADSTSLLVSE 346
P +V+ P Q+++ GQ+ S SG P+ S+ + P P +S L
Sbjct: 2343 PPSSVIALPMKEQLSTTYFTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDIS 2402
Query: 347 GTATPGSSPSPDGPVGAPAPSEPALPP 373
P P P P P P P LPP
Sbjct: 2403 AQPPPPPPPPPPPPPPPPPPPPPPLPP 2429
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,098,555
Number of Sequences: 37866
Number of extensions: 1581265
Number of successful extensions: 18177
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 1228
Number of HSP's that attempted gapping in prelim test: 10810
Number of HSP's gapped (non-prelim): 6269
length of query: 539
length of database: 18,247,518
effective HSP length: 107
effective length of query: 432
effective length of database: 14,195,856
effective search space: 6132609792
effective search space used: 6132609792
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.