Guide to the Human Genome
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Name: NUFIP1 Sequence: fasta or formatted (495aa) NCBI GI: 166235163
Description:

nuclear fragile X mental retardation protein interacting protein 1

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         31           2
 C cysteine            1.4          7           1
 D aspartate           5.5         27           1
 E glutamate           7.1         35           2
 F phenylalanine       4.0         20           2
 G glycine             3.8         19           1
 H histidine           3.4         17           2
 I isoleucine          2.8         14           2
 K lysine             10.1         50           4
 L leucine             6.7         33           2
 M methionine          2.4         12           1
 N asparagine          3.8         19           1
 P proline            10.7         53           6
 Q glutamine           4.2         21           1
 R arginine            5.3         26           2
 S serine             10.1         50           2
 T threonine           5.1         25           3
 V valine              3.0         15           1
 W tryptophan          1.8          9           1
 Y tyrosine            2.4         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear fragile X mental retardation protein intera... 
FMNL1                 0.025   formin-like 1 
SF1                   0.021   splicing factor 1 isoform 1 
PRDM2                 0.021   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.021   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.021   retinoblastoma protein-binding zinc finger protein i...
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
SF1                   0.021   splicing factor 1 isoform 2 
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.019   PREDICTED: hypothetical protein LOC80164 
WASF2                 0.019   WAS protein family, member 2 
APBB1IP               0.019   amyloid beta (A4) precursor protein-binding, family ...
WIPF2                 0.018   WIRE protein 
YLPM1                 0.017   YLP motif containing 1 
GPRASP2               0.017   G protein-coupled receptor associated sorting protei...
GPRASP2               0.017   G protein-coupled receptor associated sorting protei...
WASF1                 0.017   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.017   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.017   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.017   Wiskott-Aldrich syndrome protein family member 1 [Hom...
CBLL1                 0.017   Cas-Br-M (murine) ecotropic retroviral transforming...
WASL                  0.016   Wiskott-Aldrich syndrome gene-like protein 
KDM6B                 0.016   lysine (K)-specific demethylase 6B 
RBBP6                 0.016   retinoblastoma-binding protein 6 isoform 2 
SETD1B                0.016   SET domain containing 1B 
PRR12                 0.016   proline rich 12 
SEC16A                0.015   SEC16 homolog A 
LOC100134663          0.015   PREDICTED: hypothetical protein, partial 
YBX2                  0.015   Y box binding protein 2 
RBBP6                 0.015   retinoblastoma-binding protein 6 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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