Search of human proteins with 165932385

Search of human proteins with 165932385

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|165932385 hypothetical protein LOC388341 isoform 1 [Homo
sapiens]
         (344 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|165932385 hypothetical protein LOC388341 isoform 1 [Homo sapi...   695   0.0  
gi|134288867 hypothetical protein LOC388886 [Homo sapiens]            263   1e-70
gi|165932383 hypothetical protein LOC388341 isoform 2 [Homo sapi...   255   4e-68
gi|46249373 preferentially expressed antigen in melanoma [Homo s...    50   4e-06
gi|46249371 preferentially expressed antigen in melanoma [Homo s...    50   4e-06
gi|46249369 preferentially expressed antigen in melanoma [Homo s...    50   4e-06
gi|46249367 preferentially expressed antigen in melanoma [Homo s...    50   4e-06
gi|5174641 preferentially expressed antigen in melanoma [Homo sa...    50   4e-06
gi|88942379 PREDICTED: PRAME family member [Homo sapiens]              46   6e-05
gi|239741047 PREDICTED: PRAME family member 25-like [Homo sapiens]     46   6e-05
gi|239741045 PREDICTED: PRAME family member 23 [Homo sapiens]          46   6e-05
gi|58219004 PRAME family member 6 [Homo sapiens]                       46   6e-05
gi|61696142 PRAME family member 5 [Homo sapiens]                       46   6e-05
gi|226437621 PRAME family member 11 [Homo sapiens]                     45   9e-05
gi|239741043 PREDICTED: PRAME family member 11 [Homo sapiens]          45   9e-05
gi|148356236 PRAME family member 15 [Homo sapiens]                     45   9e-05
gi|59958373 PRAME family member 4 [Homo sapiens]                       45   9e-05
gi|61102721 PRAME family member 9 [Homo sapiens]                       45   9e-05
gi|153792112 PRAME family member 20 [Homo sapiens]                     44   2e-04
gi|153945800 PRAME family member 21 [Homo sapiens]                     44   2e-04
gi|124249372 PRAME family member 12 [Homo sapiens]                     42   8e-04
gi|158321897 NACHT, LRR and PYD containing protein 5 [Homo sapiens]    37   0.020
gi|157426839 PRAME family member 17 [Homo sapiens]                     34   0.22 
gi|113865933 PRAME family member 16 [Homo sapiens]                     34   0.22 
gi|116268109 nucleotide-binding oligomerization domains 27 [Homo...    34   0.22 
gi|154800493 PRAME family member 22 [Homo sapiens]                     33   0.28 
gi|194306638 PRAME family member 3 [Homo sapiens]                      33   0.28 
gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo...    33   0.37 
gi|74271814 NLR family, pyrin domain containing 1 isoform 5 [Hom...    33   0.37 
gi|14719829 NLR family, pyrin domain containing 1 isoform 1 [Hom...    33   0.37 

>gi|165932385 hypothetical protein LOC388341 isoform 1 [Homo
           sapiens]
          Length = 344

 Score =  695 bits (1794), Expect = 0.0
 Identities = 344/344 (100%), Positives = 344/344 (100%)

Query: 1   MGTRQTKGSLAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQE 60
           MGTRQTKGSLAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQE
Sbjct: 1   MGTRQTKGSLAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQE 60

Query: 61  LLRMVRQGRREEAGTLLQHLRQDLGMESTSLDDVLYRYASFRNLVDPITHDLIISLARYI 120
           LLRMVRQGRREEAGTLLQHLRQDLGMESTSLDDVLYRYASFRNLVDPITHDLIISLARYI
Sbjct: 61  LLRMVRQGRREEAGTLLQHLRQDLGMESTSLDDVLYRYASFRNLVDPITHDLIISLARYI 120

Query: 121 HCPKPEGDALGAMEKLCRQLTYHLSPHSQWRRHRGLVKRKPQACLKAVLAGSPPDNTVDL 180
           HCPKPEGDALGAMEKLCRQLTYHLSPHSQWRRHRGLVKRKPQACLKAVLAGSPPDNTVDL
Sbjct: 121 HCPKPEGDALGAMEKLCRQLTYHLSPHSQWRRHRGLVKRKPQACLKAVLAGSPPDNTVDL 180

Query: 181 SGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGN 240
           SGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGN
Sbjct: 181 SGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGN 240

Query: 241 RLTRAVLRDLTDILKDPSKFPNVTWIDLGNNVDIFSLPQPFLLSLRKRSPKQGHLPTILE 300
           RLTRAVLRDLTDILKDPSKFPNVTWIDLGNNVDIFSLPQPFLLSLRKRSPKQGHLPTILE
Sbjct: 241 RLTRAVLRDLTDILKDPSKFPNVTWIDLGNNVDIFSLPQPFLLSLRKRSPKQGHLPTILE 300

Query: 301 LGEGPGSGEEVREGTVGQEDPGGGPVAPAEDHHEGKETVAAAQT 344
           LGEGPGSGEEVREGTVGQEDPGGGPVAPAEDHHEGKETVAAAQT
Sbjct: 301 LGEGPGSGEEVREGTVGQEDPGGGPVAPAEDHHEGKETVAAAQT 344


>gi|134288867 hypothetical protein LOC388886 [Homo sapiens]
          Length = 315

 Score =  263 bits (673), Expect = 1e-70
 Identities = 148/309 (47%), Positives = 200/309 (64%), Gaps = 18/309 (5%)

Query: 31  ASLLLRAGDKAGR-----AGAGMPPYHRRVGMVQELLRMVRQGRREEAGTLLQHLRQDLG 85
           A L  RAG +AG      AG G  PY RRV  ++E+   +R+ R E A  LL+ LRQDLG
Sbjct: 3   ARLGRRAGPEAGSEAGAAAGCGPAPYERRVRWLREIQSTLRERRPERARQLLRLLRQDLG 62

Query: 86  MESTSLDDVLYRYASFRNLVDPITHDLIISLARYIHCPKPEGDALGAMEKLCRQLTYHLS 145
           +E T L D+LYR  +F N VDPI+HDL+++LAR + CPK + +   + +K+CRQL YHL+
Sbjct: 63  LERTLLPDILYRDVAFLNPVDPISHDLLVNLARDLQCPKKDYELWKSSDKICRQLIYHLT 122

Query: 146 PHSQWRRHRGLVKRKPQACLKA-----VLAGSPPDNTVDLSGIPLTSRDLERVTSYLQRC 200
           PHS+ ++   L +RK Q+CLK+     +LAG     TVDLSGIPL+++D++ +T YL   
Sbjct: 123 PHSKQQQGSSLRQRKTQSCLKSSLQKTLLAGE----TVDLSGIPLSTQDVQHITRYLSSH 178

Query: 201 GEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGNRLTRAVLRDLTDILKDPSKF 260
           G  +  ++L FTGL+D+++  LLP+L  LPRLT L LNGNRLTRA  R LTD +KD +KF
Sbjct: 179 GAVLAVLDLSFTGLSDELLHLLLPSLWALPRLTQLLLNGNRLTRATARKLTDAIKDTTKF 238

Query: 261 PNVTWIDLGNNVDIFSLPQPFLLSLRKRSPKQGHLPTILE----LGEGPGSGEEVREGTV 316
           P + W+DLGNNVD+ SLPQP L+ LR+R  ++  LPTI E      EG  +G      T 
Sbjct: 239 PALAWVDLGNNVDVASLPQPLLVGLRRRLSQRTSLPTIYEGLDLEPEGSAAGATTPASTW 298

Query: 317 GQEDPGGGP 325
                G GP
Sbjct: 299 DSTAAGLGP 307


>gi|165932383 hypothetical protein LOC388341 isoform 2 [Homo
           sapiens]
          Length = 212

 Score =  255 bits (652), Expect = 4e-68
 Identities = 125/125 (100%), Positives = 125/125 (100%)

Query: 1   MGTRQTKGSLAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQE 60
           MGTRQTKGSLAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQE
Sbjct: 1   MGTRQTKGSLAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQE 60

Query: 61  LLRMVRQGRREEAGTLLQHLRQDLGMESTSLDDVLYRYASFRNLVDPITHDLIISLARYI 120
           LLRMVRQGRREEAGTLLQHLRQDLGMESTSLDDVLYRYASFRNLVDPITHDLIISLARYI
Sbjct: 61  LLRMVRQGRREEAGTLLQHLRQDLGMESTSLDDVLYRYASFRNLVDPITHDLIISLARYI 120

Query: 121 HCPKP 125
           HCPKP
Sbjct: 121 HCPKP 125


>gi|46249373 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query: 176 NTVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTL 235
           + + LSG+ LT    E + + L+R    +  +     G+TDD +L LLP+LS   +LTTL
Sbjct: 352 SVLSLSGVMLTDVSPEPLQALLERASATLQDLVFDECGITDDQLLALLPSLSHCSQLTTL 411

Query: 236 ALNGNRLTRAVLRDLTDILKDPSKFPNVTW 265
           +  GN ++ + L+ L   L   S   +V +
Sbjct: 412 SFYGNSISISALQSLLQHLIGLSNLTHVLY 441


>gi|46249371 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query: 176 NTVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTL 235
           + + LSG+ LT    E + + L+R    +  +     G+TDD +L LLP+LS   +LTTL
Sbjct: 352 SVLSLSGVMLTDVSPEPLQALLERASATLQDLVFDECGITDDQLLALLPSLSHCSQLTTL 411

Query: 236 ALNGNRLTRAVLRDLTDILKDPSKFPNVTW 265
           +  GN ++ + L+ L   L   S   +V +
Sbjct: 412 SFYGNSISISALQSLLQHLIGLSNLTHVLY 441


>gi|46249369 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query: 176 NTVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTL 235
           + + LSG+ LT    E + + L+R    +  +     G+TDD +L LLP+LS   +LTTL
Sbjct: 352 SVLSLSGVMLTDVSPEPLQALLERASATLQDLVFDECGITDDQLLALLPSLSHCSQLTTL 411

Query: 236 ALNGNRLTRAVLRDLTDILKDPSKFPNVTW 265
           +  GN ++ + L+ L   L   S   +V +
Sbjct: 412 SFYGNSISISALQSLLQHLIGLSNLTHVLY 441


>gi|46249367 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query: 176 NTVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTL 235
           + + LSG+ LT    E + + L+R    +  +     G+TDD +L LLP+LS   +LTTL
Sbjct: 352 SVLSLSGVMLTDVSPEPLQALLERASATLQDLVFDECGITDDQLLALLPSLSHCSQLTTL 411

Query: 236 ALNGNRLTRAVLRDLTDILKDPSKFPNVTW 265
           +  GN ++ + L+ L   L   S   +V +
Sbjct: 412 SFYGNSISISALQSLLQHLIGLSNLTHVLY 441


>gi|5174641 preferentially expressed antigen in melanoma [Homo
           sapiens]
          Length = 509

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query: 176 NTVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTL 235
           + + LSG+ LT    E + + L+R    +  +     G+TDD +L LLP+LS   +LTTL
Sbjct: 352 SVLSLSGVMLTDVSPEPLQALLERASATLQDLVFDECGITDDQLLALLPSLSHCSQLTTL 411

Query: 236 ALNGNRLTRAVLRDLTDILKDPSKFPNVTW 265
           +  GN ++ + L+ L   L   S   +V +
Sbjct: 412 SFYGNSISISALQSLLQHLIGLSNLTHVLY 441


>gi|88942379 PREDICTED: PRAME family member [Homo sapiens]
          Length = 395

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 244 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 303

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN ++ A L +L   T ILK+
Sbjct: 304 FCGNPISMATLENLLSHTIILKN 326


>gi|239741047 PREDICTED: PRAME family member 25-like [Homo sapiens]
          Length = 474

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 323 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 382

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN ++ A L +L   T ILK+
Sbjct: 383 FCGNPISMATLENLLSHTIILKN 405


>gi|239741045 PREDICTED: PRAME family member 23 [Homo sapiens]
          Length = 476

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 325 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSCCFELNTFS 384

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN ++ A L +L   T ILK+
Sbjct: 385 FCGNPISMATLENLLSHTIILKN 407


>gi|58219004 PRAME family member 6 [Homo sapiens]
          Length = 476

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 325 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 384

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN ++ A L +L   T ILK+
Sbjct: 385 FCGNPISMATLENLLSHTIILKN 407


>gi|61696142 PRAME family member 5 [Homo sapiens]
          Length = 476

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 325 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 384

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN ++ A L +L   T ILK+
Sbjct: 385 FCGNPISMATLENLLSHTIILKN 407


>gi|226437621 PRAME family member 11 [Homo sapiens]
          Length = 436

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 285 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 344

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN +  A L +L   T ILK+
Sbjct: 345 FCGNPICMATLENLLSHTIILKN 367


>gi|239741043 PREDICTED: PRAME family member 11 [Homo sapiens]
          Length = 513

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 362 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 421

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN +  A L +L   T ILK+
Sbjct: 422 FCGNPICMATLENLLSHTIILKN 444


>gi|148356236 PRAME family member 15 [Homo sapiens]
          Length = 478

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 327 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 386

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN +  A L +L   T ILK+
Sbjct: 387 FCGNPICMATLENLLSHTIILKN 409


>gi|59958373 PRAME family member 4 [Homo sapiens]
          Length = 478

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 327 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 386

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN +  A L +L   T ILK+
Sbjct: 387 FCGNPICMATLENLLSHTIILKN 409


>gi|61102721 PRAME family member 9 [Homo sapiens]
          Length = 478

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSGI LT+  L  +   L++    ++ ++L   G+ D  V  +LPALS    L T +
Sbjct: 327 TLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFS 386

Query: 237 LNGNRLTRAVLRDL---TDILKD 256
             GN +  A L +L   T ILK+
Sbjct: 387 FCGNPICMATLENLLSHTIILKN 409


>gi|153792112 PRAME family member 20 [Homo sapiens]
          Length = 475

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSG  L +  L  +   L++    ++ ++L   G+ D  V  +LPALS    LTT +
Sbjct: 324 TLDLSGTRLANFSLVPLQVLLEKVAATLEYLDLDDCGIVDSQVNAILPALSRCFELTTFS 383

Query: 237 LNGNRLTRAVLRDL 250
             GN ++ A L +L
Sbjct: 384 FRGNPISTATLENL 397


>gi|153945800 PRAME family member 21 [Homo sapiens]
          Length = 475

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           T+DLSG  L +  L  +   L++    ++ ++L   G+ D  V  +LPALS    LTT +
Sbjct: 324 TLDLSGTRLANFSLVPLQVLLEKVAATLEYLDLDDCGIVDSQVNAILPALSRCFELTTFS 383

Query: 237 LNGNRLTRAVLRDL 250
             GN ++ A L +L
Sbjct: 384 FRGNPISTATLENL 397


>gi|124249372 PRAME family member 12 [Homo sapiens]
          Length = 483

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 23/73 (31%), Positives = 41/73 (56%)

Query: 178 VDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLAL 237
           +DL GI LT    E ++  L++    + +++L   G+ D  +  +LPALS   +L+T + 
Sbjct: 324 LDLRGITLTHFSPEPLSVLLEQAEATLQTLDLEDCGIVDSQLSAILPALSRCSQLSTFSF 383

Query: 238 NGNRLTRAVLRDL 250
            GN ++ A L +L
Sbjct: 384 CGNLISMAALENL 396


>gi|158321897 NACHT, LRR and PYD containing protein 5 [Homo sapiens]
          Length = 1200

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 23/79 (29%), Positives = 41/79 (51%)

Query: 177 TVDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLA 236
           +++L G  L   D+      L+     ++S+ L   GLT    L++   L+T P L +L+
Sbjct: 841 SLNLGGTHLKEEDVRMACEALKHPKCLLESLRLDCCGLTHACYLKISQILTTSPSLKSLS 900

Query: 237 LNGNRLTRAVLRDLTDILK 255
           L GN++T   +  L+D L+
Sbjct: 901 LAGNKVTDQGVMPLSDALR 919


>gi|157426839 PRAME family member 17 [Homo sapiens]
          Length = 474

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 20/68 (29%), Positives = 35/68 (51%)

Query: 183 IPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGNRL 242
           I + + +LE + + L++    ++ + L    + D  +  LLPALS   +LTT    GN  
Sbjct: 330 ILMWTTNLEPLGALLEKVAATLEILTLKDCQIQDSQLRVLLPALSRCSQLTTFYFRGNET 389

Query: 243 TRAVLRDL 250
           +   L+DL
Sbjct: 390 STNALKDL 397


>gi|113865933 PRAME family member 16 [Homo sapiens]
          Length = 474

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 20/68 (29%), Positives = 35/68 (51%)

Query: 183 IPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGNRL 242
           I + + +LE + + L++    ++ + L    + D  +  LLPALS   +LTT    GN  
Sbjct: 330 ILMWTTNLEPLGALLEKVAATLEILTLKDCQIQDSQLRVLLPALSRCSQLTTFYFRGNET 389

Query: 243 TRAVLRDL 250
           +   L+DL
Sbjct: 390 STNALKDL 397


>gi|116268109 nucleotide-binding oligomerization domains 27 [Homo
           sapiens]
          Length = 1866

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 180 LSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNG 239
           L+G  +T+R +  +   L  C  Q+  V      L+D +VL ++  L  LPRL  L L+ 
Sbjct: 721 LAGSKITARGISHLVKALPLC-PQLKEVSFRDNQLSDQVVLNIVEVLPHLPRLRKLDLSS 779

Query: 240 NRLTRAVL 247
           N +  + L
Sbjct: 780 NSICVSTL 787


>gi|154800493 PRAME family member 22 [Homo sapiens]
          Length = 481

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 190 LERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGNRLTRAVLRD 249
           LE + + L++    + ++ L   G+ D  +  +LPALS    LTT   +GN  +   L+D
Sbjct: 339 LEPLRALLEKVAATLQTLFLVDCGIRDSKLRVILPALSCCSNLTTFCFHGNDTSMDGLKD 398

Query: 250 L 250
           L
Sbjct: 399 L 399


>gi|194306638 PRAME family member 3 [Homo sapiens]
          Length = 481

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 190 LERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGNRLTRAVLRD 249
           LE + + L++    + ++ L   G+ D  +  +LPALS    LTT   +GN  +   L+D
Sbjct: 339 LEPLRALLEKVAATLQTLFLVDCGIRDSKLRVILPALSCCSNLTTFCFHGNDTSMDGLKD 398

Query: 250 L 250
           L
Sbjct: 399 L 399


>gi|7662386 NLR family, pyrin domain containing 1 isoform 2 [Homo
            sapiens]
          Length = 1429

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 7/149 (4%)

Query: 178  VDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLAL 237
            +DLS   LT    + +   L++   ++  ++L   GLT D    L   LS  P L  L L
Sbjct: 870  LDLSFNVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVLSASPSLKELDL 929

Query: 238  NGNRLTRAVLRDLTDILKDPS------KFPNVTWID-LGNNVDIFSLPQPFLLSLRKRSP 290
              N L    +R L + L+ P+           T  D +   +      +P LL   +R P
Sbjct: 930  QQNNLDDVGVRLLCEGLRHPACKLIRLGLDQTTLSDEMRQELRALEQEKPQLLIFSRRKP 989

Query: 291  KQGHLPTILELGEGPGSGEEVREGTVGQE 319
                    L+ GE   S   ++   +G E
Sbjct: 990  SVMTPTEGLDTGEMSNSTSSLKRQRLGSE 1018



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/81 (30%), Positives = 39/81 (48%)

Query: 178 VDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLAL 237
           +DLSG  L+   ++ +   L+R    ++++ L   GLT +    L   L     LT L L
Sbjct: 813 LDLSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDL 872

Query: 238 NGNRLTRAVLRDLTDILKDPS 258
           + N LT A  + L   L+ PS
Sbjct: 873 SFNVLTDAGAKHLCQRLRQPS 893


>gi|74271814 NLR family, pyrin domain containing 1 isoform 5 [Homo
            sapiens]
          Length = 1375

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 7/149 (4%)

Query: 178  VDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLAL 237
            +DLS   LT    + +   L++   ++  ++L   GLT D    L   LS  P L  L L
Sbjct: 870  LDLSFNVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVLSASPSLKELDL 929

Query: 238  NGNRLTRAVLRDLTDILKDPS------KFPNVTWID-LGNNVDIFSLPQPFLLSLRKRSP 290
              N L    +R L + L+ P+           T  D +   +      +P LL   +R P
Sbjct: 930  QQNNLDDVGVRLLCEGLRHPACKLIRLGLDQTTLSDEMRQELRALEQEKPQLLIFSRRKP 989

Query: 291  KQGHLPTILELGEGPGSGEEVREGTVGQE 319
                    L+ GE   S   ++   +G E
Sbjct: 990  SVMTPTEGLDTGEMSNSTSSLKRQRLGSE 1018



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/81 (30%), Positives = 39/81 (48%)

Query: 178 VDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLAL 237
           +DLSG  L+   ++ +   L+R    ++++ L   GLT +    L   L     LT L L
Sbjct: 813 LDLSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDL 872

Query: 238 NGNRLTRAVLRDLTDILKDPS 258
           + N LT A  + L   L+ PS
Sbjct: 873 SFNVLTDAGAKHLCQRLRQPS 893


>gi|14719829 NLR family, pyrin domain containing 1 isoform 1 [Homo
            sapiens]
          Length = 1473

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 7/149 (4%)

Query: 178  VDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLAL 237
            +DLS   LT    + +   L++   ++  ++L   GLT D    L   LS  P L  L L
Sbjct: 870  LDLSFNVLTDAGAKHLCQRLRQPSCKLQRLQLVSCGLTSDCCQDLASVLSASPSLKELDL 929

Query: 238  NGNRLTRAVLRDLTDILKDPS------KFPNVTWID-LGNNVDIFSLPQPFLLSLRKRSP 290
              N L    +R L + L+ P+           T  D +   +      +P LL   +R P
Sbjct: 930  QQNNLDDVGVRLLCEGLRHPACKLIRLGLDQTTLSDEMRQELRALEQEKPQLLIFSRRKP 989

Query: 291  KQGHLPTILELGEGPGSGEEVREGTVGQE 319
                    L+ GE   S   ++   +G E
Sbjct: 990  SVMTPTEGLDTGEMSNSTSSLKRQRLGSE 1018



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/81 (30%), Positives = 39/81 (48%)

Query: 178 VDLSGIPLTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLAL 237
           +DLSG  L+   ++ +   L+R    ++++ L   GLT +    L   L     LT L L
Sbjct: 813 LDLSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGLRANQTLTELDL 872

Query: 238 NGNRLTRAVLRDLTDILKDPS 258
           + N LT A  + L   L+ PS
Sbjct: 873 SFNVLTDAGAKHLCQRLRQPS 893


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,421,126
Number of Sequences: 37866
Number of extensions: 803520
Number of successful extensions: 3003
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2905
Number of HSP's gapped (non-prelim): 128
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.