LOC645359 36712

Name: LOC645359	Sequence: fasta or formatted (395aa)		NCBI GI: 88942379
Description: PREDICTED: PRAME family member		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.0 12 2 C cysteine 5.3 21 2 D aspartate 5.1 20 2 E glutamate 4.8 19 1 F phenylalanine 3.8 15 1 G glycine 3.3 13 1 H histidine 2.5 10 1 I isoleucine 4.8 19 2 K lysine 6.3 25 2 L leucine 17.0 67 3 M methionine 2.8 11 1 N asparagine 4.3 17 1 P proline 4.1 16 1 Q glutamine 4.8 19 1 R arginine 6.1 24 2 S serine 6.6 26 1 T threonine 5.6 22 2 V valine 5.6 22 1 W tryptophan 1.8 7 1 Y tyrosine 2.5 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: PRAME family member PRAMEF4 0.938 PRAME family member 4 PRAMEF15 0.937 PRAME family member 15 PRAMEF9 0.937 PRAME family member 9 PRAMEF5 0.926 PRAME family member 5 PRAMEF6 0.926 PRAME family member 6 PRAMEF23 0.923 PREDICTED: PRAME family member 23 PRAMEF11 0.916 PRAME family member 11 PRAMEF11 0.916 PREDICTED: PRAME family member 11 PRAMEF20 0.767 PRAME family member 20 PRAMEF21 0.767 PRAME family member 21 PRAMEF25 0.686 PREDICTED: PRAME family member 25-like PRAMEF12 0.536 PRAME family member 12 LOC729516 0.521 PREDICTED: similar to Putative PRAME family member ... PRAMEF7 0.518 PRAME family member 7 PRAMEF8 0.518 PRAME family member 8 PRAME 0.397 preferentially expressed antigen in melanoma PRAME 0.397 preferentially expressed antigen in melanoma PRAME 0.397 preferentially expressed antigen in melanoma PRAME 0.397 preferentially expressed antigen in melanoma PRAME 0.397 preferentially expressed antigen in melanoma PRAMEF22 0.361 PRAME family member 22 PRAMEF18 0.355 PRAME family member 18 PRAMEF16 0.354 PRAME family member 16 PRAMEF3 0.352 PRAME family member 3 PRAMEF1 0.352 PRAME family member 1 PRAMEF13 0.352 PRAME family member 13 PRAMEF17 0.351 PRAME family member 17 PRAMEF19 0.351 PRAME family member 19 PRAMEF10 0.350 PRAME family member 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.