PRAME 31997

Name: PRAME	Sequence: fasta or formatted (509aa)		NCBI GI: 5174641
Description: preferentially expressed antigen in melanoma		Referenced in: Leucine-rich Repeat Family
Other entries for this name: alt mRNA [509aa] preferentially expressed antigen in melanoma alt mRNA [509aa] preferentially expressed antigen in melanoma alt mRNA [509aa] preferentially expressed antigen in melanoma alt mRNA [509aa] preferentially expressed antigen in melanoma
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 29 2 C cysteine 2.8 14 2 D aspartate 4.5 23 2 E glutamate 6.1 31 2 F phenylalanine 3.9 20 2 G glycine 3.7 19 1 H histidine 2.9 15 1 I isoleucine 3.9 20 1 K lysine 4.3 22 2 L leucine 17.9 91 3 M methionine 3.1 16 1 N asparagine 2.0 10 1 P proline 5.9 30 2 Q glutamine 5.3 27 1 R arginine 5.5 28 3 S serine 8.8 45 2 T threonine 4.1 21 2 V valine 5.5 28 1 W tryptophan 1.6 8 1 Y tyrosine 2.4 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 preferentially expressed antigen in melanoma PRAME 1.000 preferentially expressed antigen in melanoma PRAME 1.000 preferentially expressed antigen in melanoma PRAME 1.000 preferentially expressed antigen in melanoma PRAME 1.000 preferentially expressed antigen in melanoma PRAMEF12 0.445 PRAME family member 12 LOC729516 0.431 PREDICTED: similar to Putative PRAME family member ... PRAMEF8 0.429 PRAME family member 8 PRAMEF7 0.428 PRAME family member 7 PRAMEF15 0.424 PRAME family member 15 PRAMEF9 0.424 PRAME family member 9 PRAMEF5 0.421 PRAME family member 5 PRAMEF4 0.421 PRAME family member 4 PRAMEF6 0.421 PRAME family member 6 PRAMEF23 0.418 PREDICTED: PRAME family member 23 PRAMEF20 0.414 PRAME family member 20 PRAMEF21 0.414 PRAME family member 21 PRAMEF11 0.413 PREDICTED: PRAME family member 11 PRAMEF25 0.375 PREDICTED: PRAME family member 25-like PRAMEF11 0.363 PRAME family member 11 PRAMEF10 0.338 PRAME family member 10 PRAMEF22 0.337 PRAME family member 22 PRAMEF13 0.335 PRAME family member 13 PRAMEF17 0.330 PRAME family member 17 PRAMEF18 0.330 PRAME family member 18 PRAMEF1 0.329 PRAME family member 1 PRAMEF3 0.329 PRAME family member 3 PRAMEF16 0.329 PRAME family member 16 PRAMEF19 0.326 PRAME family member 19 PRAMEF2 0.318 PRAME family member 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.