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Search of human proteins with 16554585
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16554585 coronin, actin binding protein, 2A [Homo sapiens]
(525 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209529711 coronin, actin binding protein, 2A [Homo sapiens] 1077 0.0
gi|16554585 coronin, actin binding protein, 2A [Homo sapiens] 1077 0.0
gi|148529011 coronin, actin binding protein, 2B [Homo sapiens] 670 0.0
gi|65787364 coronin, actin binding protein, 1B [Homo sapiens] 422 e-118
gi|14149734 coronin, actin binding protein, 1B [Homo sapiens] 422 e-118
gi|7656991 coronin, actin binding protein, 1C isoform 1 [Homo sa... 410 e-114
gi|109627650 coronin 6 [Homo sapiens] 399 e-111
gi|5902134 coronin, actin binding protein, 1A [Homo sapiens] 396 e-110
gi|168229161 coronin 7 [Homo sapiens] 210 2e-54
gi|213021190 transducin beta-like 1X isoform b [Homo sapiens] 73 6e-13
gi|213021188 transducin beta-like 1X isoform b [Homo sapiens] 73 6e-13
gi|213021186 transducin beta-like 1X isoform a [Homo sapiens] 73 6e-13
gi|5032159 transducin beta-like 1X isoform a [Homo sapiens] 73 6e-13
gi|19913367 transducin beta-like 1Y [Homo sapiens] 72 1e-12
gi|19913365 transducin beta-like 1Y [Homo sapiens] 72 1e-12
gi|15150805 transducin beta-like 1Y [Homo sapiens] 72 1e-12
gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo s... 72 1e-12
gi|23199987 WD repeat domain 5B [Homo sapiens] 65 1e-10
gi|16554629 WD repeat domain 5 [Homo sapiens] 65 2e-10
gi|16554627 WD repeat domain 5 [Homo sapiens] 65 2e-10
gi|4506439 retinoblastoma binding protein 7 [Homo sapiens] 64 3e-10
gi|207029439 retinoblastoma binding protein 4 isoform c [Homo sa... 63 6e-10
gi|207029415 retinoblastoma binding protein 4 isoform b [Homo sa... 63 6e-10
gi|5032027 retinoblastoma binding protein 4 isoform a [Homo sapi... 63 6e-10
gi|7657439 PCAF associated factor 65 beta isoform a [Homo sapiens] 60 5e-09
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 59 8e-09
gi|4757988 WD repeat domain 39 [Homo sapiens] 57 3e-08
gi|113865883 WD repeat domain 38 [Homo sapiens] 57 5e-08
gi|4505731 peroxisomal biogenesis factor 7 [Homo sapiens] 56 9e-08
gi|24431950 PRP4 pre-mRNA processing factor 4 homolog [Homo sapi... 55 1e-07
>gi|209529711 coronin, actin binding protein, 2A [Homo sapiens]
Length = 525
Score = 1077 bits (2786), Expect = 0.0
Identities = 525/525 (100%), Positives = 525/525 (100%)
Query: 1 MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF 60
MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF
Sbjct: 1 MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF 60
Query: 61 LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN 120
LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN
Sbjct: 61 LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN 120
Query: 121 LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ 180
LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ
Sbjct: 121 LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ 180
Query: 181 DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMST 240
DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMST
Sbjct: 181 DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMST 240
Query: 241 GTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV 300
GTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV
Sbjct: 241 GTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV 300
Query: 301 SADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRR 360
SADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRR
Sbjct: 301 SADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRR 360
Query: 361 SESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA 420
SESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA
Sbjct: 361 SESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA 420
Query: 421 PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTE 480
PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTE
Sbjct: 421 PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTE 480
Query: 481 NELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL 525
NELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL
Sbjct: 481 NELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL 525
>gi|16554585 coronin, actin binding protein, 2A [Homo sapiens]
Length = 525
Score = 1077 bits (2786), Expect = 0.0
Identities = 525/525 (100%), Positives = 525/525 (100%)
Query: 1 MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF 60
MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF
Sbjct: 1 MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF 60
Query: 61 LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN 120
LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN
Sbjct: 61 LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN 120
Query: 121 LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ 180
LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ
Sbjct: 121 LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ 180
Query: 181 DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMST 240
DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMST
Sbjct: 181 DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMST 240
Query: 241 GTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV 300
GTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV
Sbjct: 241 GTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV 300
Query: 301 SADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRR 360
SADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRR
Sbjct: 301 SADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRR 360
Query: 361 SESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA 420
SESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA
Sbjct: 361 SESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA 420
Query: 421 PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTE 480
PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTE
Sbjct: 421 PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTE 480
Query: 481 NELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL 525
NELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL
Sbjct: 481 NELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL 525
>gi|148529011 coronin, actin binding protein, 2B [Homo sapiens]
Length = 480
Score = 670 bits (1729), Expect = 0.0
Identities = 319/519 (61%), Positives = 403/519 (77%), Gaps = 50/519 (9%)
Query: 1 MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF 60
MSW PQYRSSKFR+V+GK A++E+C+D +PIT++VHDNHFCAVN F+A+VTE AGGG+F
Sbjct: 6 MSWRPQYRSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSF 65
Query: 61 LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN 120
LVIPL QTG+++P+YPKVCGH+GNVLD+KWNPF D IASCSED +++IW IP+ L RN
Sbjct: 66 LVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRN 125
Query: 121 LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ 180
+T EL GH+RRVGLVEWHPT NILFSAGYDYKV+IWNLD E P+ I CH
Sbjct: 126 MTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGE-----PVKMIDCHT 180
Query: 181 DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMST 240
DVIL MSFNT+GSLL TTCKD+K+RVI+PR+G VLQEA+ K HR ++V+FLGN+K+L++T
Sbjct: 181 DVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTT 240
Query: 241 GTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV 300
G SRWN RQ+ALWDQ++LS+PL+EE++DG SG+LFPFYDADT MLY+ GKGDGNIRYYE+
Sbjct: 241 GVSRWNTRQIALWDQEDLSMPLIEEEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEI 300
Query: 301 SADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRR 360
S +KP+LSYL E+RS PQKG+GVMPK GLDVS+CE+FRFYKL+T K LIEPISMIVPRR
Sbjct: 301 STEKPYLSYLMEFRSPAPQKGLGVMPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRR 360
Query: 361 SESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA 420
S+SYQEDIYP T G +P+LT EWL G+NRDP+L+SL+
Sbjct: 361 SDSYQEDIYPMTPGTEPALTPDEWLGGINRDPVLMSLK---------------------- 398
Query: 421 PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTE 480
+G++ SS + K P ++EKK+ + NG D+ E PP+TE
Sbjct: 399 ----------------EGYKKSSKMVFKAP-------IKEKKSVVVNGIDLLENVPPRTE 435
Query: 481 NELLQMFYRQQEEIRRLRELLTQREVQAKQLELEIKNLR 519
NELL+MF+RQQ+EIRRL+E L Q++++ +QL+LE+KNLR
Sbjct: 436 NELLRMFFRQQDEIRRLKEELAQKDIRIRQLQLELKNLR 474
>gi|65787364 coronin, actin binding protein, 1B [Homo sapiens]
Length = 489
Score = 422 bits (1086), Expect = e-118
Identities = 215/454 (47%), Positives = 297/454 (65%), Gaps = 20/454 (4%)
Query: 1 MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF 60
MS+ R SKFRHVFG+P + CY+ + ++R D+ FCAVNP F+AV+ E +GGGAF
Sbjct: 1 MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60
Query: 61 LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN 120
LV+PL +TG++D YP VCGH G VLD+ W P +D IAS SED T+ +W IP+ LT
Sbjct: 61 LVLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSP 120
Query: 121 LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ 180
LT L GH +RVG++ WHPTA N+L SAG D V+IWN+ T E + S H
Sbjct: 121 LTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLD----SLHP 176
Query: 181 DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVL--QEASYKGHRASKVLFLGNLKKLM 238
D+I ++S+N NGSL + CKD+ +R+IDPR GT++ +E +++G R + +FL + K+
Sbjct: 177 DLIYNVSWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVF 235
Query: 239 STGTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYY 298
+TG SR + RQ+ALWD +NL P+ ++LD S+G L PFYD DTS++YV GKGD +IRY+
Sbjct: 236 TTGFSRMSERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYF 295
Query: 299 EVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVP 358
E++ + P++ +L + S PQ+G+G MPKRGL+VS CEI RFYKL K EPI M VP
Sbjct: 296 EITEEPPYIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLHERK--CEPIVMTVP 353
Query: 359 RRSESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPG--------SELLRPHPLP 410
R+S+ +Q+D+YP TAG + +L A+EW+SG + DPIL+SLR ++ R + L
Sbjct: 354 RKSDLFQDDLYPDTAGPEAALEAEEWVSGRDADPILISLREAYVPSKQRDLKISRRNVLS 413
Query: 411 AERPIFNSMAPASPRLLNQTEKLAAEDGWRSSSL 444
RP +MAP S L A D S SL
Sbjct: 414 DSRP---AMAPGSSHLGAPASTTTAADATPSGSL 444
>gi|14149734 coronin, actin binding protein, 1B [Homo sapiens]
Length = 489
Score = 422 bits (1086), Expect = e-118
Identities = 215/454 (47%), Positives = 297/454 (65%), Gaps = 20/454 (4%)
Query: 1 MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAF 60
MS+ R SKFRHVFG+P + CY+ + ++R D+ FCAVNP F+AV+ E +GGGAF
Sbjct: 1 MSFRKVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAF 60
Query: 61 LVIPLHQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRN 120
LV+PL +TG++D YP VCGH G VLD+ W P +D IAS SED T+ +W IP+ LT
Sbjct: 61 LVLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSP 120
Query: 121 LTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQ 180
LT L GH +RVG++ WHPTA N+L SAG D V+IWN+ T E + S H
Sbjct: 121 LTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLD----SLHP 176
Query: 181 DVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVL--QEASYKGHRASKVLFLGNLKKLM 238
D+I ++S+N NGSL + CKD+ +R+IDPR GT++ +E +++G R + +FL + K+
Sbjct: 177 DLIYNVSWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKVF 235
Query: 239 STGTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYY 298
+TG SR + RQ+ALWD +NL P+ ++LD S+G L PFYD DTS++YV GKGD +IRY+
Sbjct: 236 TTGFSRMSERQLALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYF 295
Query: 299 EVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVP 358
E++ + P++ +L + S PQ+G+G MPKRGL+VS CEI RFYKL K EPI M VP
Sbjct: 296 EITEEPPYIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLHERK--CEPIVMTVP 353
Query: 359 RRSESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPG--------SELLRPHPLP 410
R+S+ +Q+D+YP TAG + +L A+EW+SG + DPIL+SLR ++ R + L
Sbjct: 354 RKSDLFQDDLYPDTAGPEAALEAEEWVSGRDADPILISLREAYVPSKQRDLKISRRNVLS 413
Query: 411 AERPIFNSMAPASPRLLNQTEKLAAEDGWRSSSL 444
RP +MAP S L A D S SL
Sbjct: 414 DSRP---AMAPGSSHLGAPASTTTAADATPSGSL 444
>gi|7656991 coronin, actin binding protein, 1C isoform 1 [Homo
sapiens]
Length = 474
Score = 410 bits (1054), Expect = e-114
Identities = 195/395 (49%), Positives = 276/395 (69%), Gaps = 9/395 (2%)
Query: 8 RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67
R SKFRHVFG+ + CYD + ++R D+ FCAVNP F+A++ E +GGGAFLV+PLH+
Sbjct: 6 RQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLPLHK 65
Query: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
TG++D YP VCGH G VLD+ W P +D IAS SED T+ +W IP+ LT +LT
Sbjct: 66 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 125
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
L GH++RVG+V WHPTA N+L SAG D ++IWN+ T E++I + H D+I ++S
Sbjct: 126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALI----NLDDMHSDMIYNVS 181
Query: 188 FNTNGSLLATTCKDRKIRVIDPRAGTVL--QEASYKGHRASKVLFLGNLKKLMSTGTSRW 245
+N NGSL+ T KD+K+RVIDPR ++ +E +++G R + +FL + + +TG SR
Sbjct: 182 WNRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLAD-GNVFTTGFSRM 240
Query: 246 NNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKP 305
+ RQ+ALW+ N+ P+ ++D S+GVL PFYD DTS++Y+ GKGD +IRY+E++ + P
Sbjct: 241 SERQLALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESP 300
Query: 306 HLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRRSESYQ 365
++ YL + S PQ+G+G MPKRGLDV+ CEI RF+KL K EPI M VPR+S+ +Q
Sbjct: 301 YVHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK--CEPIIMTVPRKSDLFQ 358
Query: 366 EDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPG 400
+D+YP TAG + +L A+EW G N DPIL+SL+ G
Sbjct: 359 DDLYPDTAGPEAALEAEEWFEGKNADPILISLKHG 393
>gi|109627650 coronin 6 [Homo sapiens]
Length = 472
Score = 399 bits (1026), Expect = e-111
Identities = 201/443 (45%), Positives = 286/443 (64%), Gaps = 10/443 (2%)
Query: 8 RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67
R SKFRHVFG+ A + Y+ + +++ D+ FCAVNP F+A++ E GGGAF+V+PL +
Sbjct: 7 RQSKFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAK 66
Query: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
TG++D +YP V GH VLD+ W P +D IAS S+D TI +W IP RN+T
Sbjct: 67 TGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITEPIIT 126
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
L GH++RVG++ WHPTA N+L SAG D ++IWN+ T E + +S H DVI S+
Sbjct: 127 LEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVL----LSLDDMHPDVIHSVC 182
Query: 188 FNTNGSLLATTCKDRKIRVIDPRAGTVLQE--ASYKGHRASKVLFLGNLKKLMSTGTSRW 245
+N+NGSLLATTCKD+ +R+IDPR G V+ E A+++G R + +F + +TG +R
Sbjct: 183 WNSNGSLLATTCKDKTLRIIDPRKGQVVAERFAAHEGMRPMRAVFT-RQGHIFTTGFTRM 241
Query: 246 NNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKP 305
+ R++ LWD +N P+ +++D S+GVL PFYD D+S++Y+ GKGD +IRY+E++ + P
Sbjct: 242 SQRELGLWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPP 301
Query: 306 HLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRRSESYQ 365
+ YL + S PQ+G+G MPKRGLDVS CEI RFYKL K EPI M VPR+S+ +Q
Sbjct: 302 FVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK--CEPIIMTVPRKSDLFQ 359
Query: 366 EDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPL-PAERPIFNSMAPASP 424
+D+YP T G +P+L A EWLSG + +P+L+SLR G + L +R I + P+ P
Sbjct: 360 DDLYPDTPGPEPALEADEWLSGQDAEPVLISLRDGYVPPKHRELRVTKRNILDVRPPSGP 419
Query: 425 RLLNQTEKLAAEDGWRSSSLLEE 447
R +LLEE
Sbjct: 420 RRSQSASDAPLSQQHTLETLLEE 442
>gi|5902134 coronin, actin binding protein, 1A [Homo sapiens]
Length = 461
Score = 396 bits (1017), Expect = e-110
Identities = 194/419 (46%), Positives = 282/419 (67%), Gaps = 8/419 (1%)
Query: 8 RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67
RSSKFRHVFG+PA + CY+ V ++++ D+ FCAVNP F+A++ E +GGGAFLV+PL +
Sbjct: 7 RSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLGK 66
Query: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
TG++D + P VCGH VLD+ W P +D IAS SED T+ +W IP L L
Sbjct: 67 TGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVT 126
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
L GH +RVG+V WH TA N+L SAG D +M+W++ T +++T H D I S+
Sbjct: 127 LEGHTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGTGAAMLTLGPEV---HPDTIYSVD 183
Query: 188 FNTNGSLLATTCKDRKIRVIDPRAGTVLQEAS--YKGHRASKVLFLGNLKKLMSTGTSRW 245
++ +G L+ T+C+D+++R+I+PR GTV+ E ++G R + +F+ K+++TG SR
Sbjct: 184 WSRDGGLICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVRAVFVSE-GKILTTGFSRM 242
Query: 246 NNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSADKP 305
+ RQVALWD +L PL ++LD SSGVL PF+D DT+++Y+ GKGD +IRY+E++++ P
Sbjct: 243 SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302
Query: 306 HLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRRSESYQ 365
L YL+ + S Q+G+G MPKRGL+V+ CEI RFYKL + EPI+M VPR+S+ +Q
Sbjct: 303 FLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERR--CEPIAMTVPRKSDLFQ 360
Query: 366 EDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMAPASP 424
ED+YPPTAG P+LTA+EWL G + P+L+SL+ G + L R + A+P
Sbjct: 361 EDLYPPTAGPDPALTAEEWLGGRDAGPLLISLKDGYVPPKSRELRVNRGLDTGRRRAAP 419
>gi|168229161 coronin 7 [Homo sapiens]
Length = 925
Score = 210 bits (535), Expect = 2e-54
Identities = 140/429 (32%), Positives = 226/429 (52%), Gaps = 20/429 (4%)
Query: 9 SSKFRHVFGKPASKENCYDSVP---ITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPL 65
SSKFRH G +++ ++ +T + FCA N +AV + GG V+ L
Sbjct: 470 SSKFRHAQGTVLHRDSHITNLKGLNLTTPGESDGFCA-NKLRVAVPL-LSSGGQVAVLEL 527
Query: 66 HQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYR 125
+ G+L + V D+ W+PFD +A EDA I++W +P + L LT
Sbjct: 528 RKPGRLPDTALPTLQNGAAVTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEVLTTPE 587
Query: 126 KELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILS 185
L GH ++ + +HP AAN+L S+ YD V IW+L + + HQD I S
Sbjct: 588 TVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRL-----KLQGHQDQIFS 642
Query: 186 MSFNTNGSLLATTCKDRKIRVIDPRAG-TVLQEA-SYKGHRASKVLFLGNLKKLMSTGTS 243
++++ +G LAT CKD ++RV PR+G LQE KG R ++++++ + + L+ +G
Sbjct: 643 LAWSPDGQQLATVCKDGRVRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVSGFD 702
Query: 244 RWNNRQVALWDQDNLS-VPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSA 302
+ RQ+ L++ + L+ PL LD + L P YD DT ++ + GKGD + YE+
Sbjct: 703 SQSERQLLLYEAEALAGGPLAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLP 762
Query: 303 DKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPR-RS 361
+ P + S +P KG+ ++PK DV E+ R +L +S +EP++ +PR R
Sbjct: 763 ESPFFLECNSFTSPDPHKGLVLLPKTECDVREVELMRCLRL--RQSSLEPVAFRLPRVRK 820
Query: 362 ESYQEDIYPPTAGA-QPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA 420
E +Q+D++P TA +P L+A+ WL G N P L+SL+P ++ P E P A
Sbjct: 821 EFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLLSLQP-PDMSPVSQAPREAPA--RRA 877
Query: 421 PASPRLLNQ 429
P+S + L +
Sbjct: 878 PSSAQYLEE 886
Score = 192 bits (487), Expect = 8e-49
Identities = 126/426 (29%), Positives = 219/426 (51%), Gaps = 24/426 (5%)
Query: 6 QYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPL 65
++R SKFRH +P +E+ + + + + IA ++ G ++PL
Sbjct: 3 RFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPG--VLGIVPL 60
Query: 66 HQTGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYR 125
G+ + H V D+ ++PFDDF +A+ S D T+K+W +P + L +
Sbjct: 61 QGQGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGP--GQALPSAP 118
Query: 126 KELVG-HARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVIL 184
++G V ++++HPT+ IL SA V +W+ ++ P++ ++ H D++
Sbjct: 119 GVVLGPEDLPVEVLQFHPTSDGILVSAA-GTTVKVWDAAKQQ-----PLTELAAHGDLVQ 172
Query: 185 SMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEAS--YKGHRASKVLFLGNLKKLMSTGT 242
S ++ +G+L+ T CKD+++R+ DPR +++ ++ R S++ ++G + L+STG
Sbjct: 173 SAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGF 232
Query: 243 SRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEVSA 302
++ R+V LWD S L LD S G L P D D+ +L + GKG+ + YEV
Sbjct: 233 NQMREREVKLWDTRFFSSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVP 292
Query: 303 DKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEPISMIVPRRSE 362
+P LS +T+ + +G ++P++ L V SCE+ R +L T I PI VPR++
Sbjct: 293 QQPALSPVTQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDT--AIVPIGYHVPRKAV 350
Query: 363 SYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHP------LPAERPIF 416
+ ED++P TAG P+ W +G N+ VSL P RPHP +P P+
Sbjct: 351 EFHEDLFPDTAGCVPATDPHSWWAGDNQQVQKVSLNPA---CRPHPSFTSCLVPPAEPLP 407
Query: 417 NSMAPA 422
++ PA
Sbjct: 408 DTAQPA 413
>gi|213021190 transducin beta-like 1X isoform b [Homo sapiens]
Length = 526
Score = 73.2 bits (178), Expect = 6e-13
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P +ASCS+D T+KIWS+ +++ +L A+ KE+ ++
Sbjct: 359 GHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIY-------TIK 410
Query: 140 WHPTA-------ANI-LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT +NI L SA +D V +W D + V T T++ HQ+ + S++F+ +
Sbjct: 411 WSPTGPATSNPNSNIMLASASFDSTVRLW--DIERGVCT---HTLTKHQEPVYSVAFSPD 465
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + ++G ++ SY+G
Sbjct: 466 GKYLASGSFDKCVHIWNTQSGNLVH--SYRG 494
Score = 48.9 bits (115), Expect = 1e-05
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ V
Sbjct: 179 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 237
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ T +L + YD IW D + ST+ H+ I ++ +N G
Sbjct: 238 KDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLA------STLGQHKGPIFALKWNRKG 290
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGN 233
+ + + D+ + D G Q+ + A V + N
Sbjct: 291 NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 331
Score = 37.0 bits (84), Expect = 0.044
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDV----- 182
L GH V + W+P + ++L S D IWNL+ + ++ + C ++
Sbjct: 177 LRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 235
Query: 183 ----ILSMSFNTNGSLLATTCKDRKIRV 206
+ S+ +NTNG+LLAT D R+
Sbjct: 236 SNKDVTSLDWNTNGTLLATGSYDGFARI 263
>gi|213021188 transducin beta-like 1X isoform b [Homo sapiens]
Length = 526
Score = 73.2 bits (178), Expect = 6e-13
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P +ASCS+D T+KIWS+ +++ +L A+ KE+ ++
Sbjct: 359 GHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIY-------TIK 410
Query: 140 WHPTA-------ANI-LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT +NI L SA +D V +W D + V T T++ HQ+ + S++F+ +
Sbjct: 411 WSPTGPATSNPNSNIMLASASFDSTVRLW--DIERGVCT---HTLTKHQEPVYSVAFSPD 465
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + ++G ++ SY+G
Sbjct: 466 GKYLASGSFDKCVHIWNTQSGNLVH--SYRG 494
Score = 48.9 bits (115), Expect = 1e-05
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ V
Sbjct: 179 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 237
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ T +L + YD IW D + ST+ H+ I ++ +N G
Sbjct: 238 KDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLA------STLGQHKGPIFALKWNRKG 290
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGN 233
+ + + D+ + D G Q+ + A V + N
Sbjct: 291 NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 331
Score = 37.0 bits (84), Expect = 0.044
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDV----- 182
L GH V + W+P + ++L S D IWNL+ + ++ + C ++
Sbjct: 177 LRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 235
Query: 183 ----ILSMSFNTNGSLLATTCKDRKIRV 206
+ S+ +NTNG+LLAT D R+
Sbjct: 236 SNKDVTSLDWNTNGTLLATGSYDGFARI 263
>gi|213021186 transducin beta-like 1X isoform a [Homo sapiens]
Length = 577
Score = 73.2 bits (178), Expect = 6e-13
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P +ASCS+D T+KIWS+ +++ +L A+ KE+ ++
Sbjct: 410 GHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIY-------TIK 461
Query: 140 WHPTA-------ANI-LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT +NI L SA +D V +W D + V T T++ HQ+ + S++F+ +
Sbjct: 462 WSPTGPATSNPNSNIMLASASFDSTVRLW--DIERGVCT---HTLTKHQEPVYSVAFSPD 516
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + ++G ++ SY+G
Sbjct: 517 GKYLASGSFDKCVHIWNTQSGNLVH--SYRG 545
Score = 48.9 bits (115), Expect = 1e-05
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ V
Sbjct: 230 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 288
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ T +L + YD IW D + ST+ H+ I ++ +N G
Sbjct: 289 KDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLA------STLGQHKGPIFALKWNRKG 341
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGN 233
+ + + D+ + D G Q+ + A V + N
Sbjct: 342 NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 382
Score = 37.0 bits (84), Expect = 0.044
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDV----- 182
L GH V + W+P + ++L S D IWNL+ + ++ + C ++
Sbjct: 228 LRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 183 ----ILSMSFNTNGSLLATTCKDRKIRV 206
+ S+ +NTNG+LLAT D R+
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARI 314
>gi|5032159 transducin beta-like 1X isoform a [Homo sapiens]
Length = 577
Score = 73.2 bits (178), Expect = 6e-13
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P +ASCS+D T+KIWS+ +++ +L A+ KE+ ++
Sbjct: 410 GHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIY-------TIK 461
Query: 140 WHPTA-------ANI-LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT +NI L SA +D V +W D + V T T++ HQ+ + S++F+ +
Sbjct: 462 WSPTGPATSNPNSNIMLASASFDSTVRLW--DIERGVCT---HTLTKHQEPVYSVAFSPD 516
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + ++G ++ SY+G
Sbjct: 517 GKYLASGSFDKCVHIWNTQSGNLVH--SYRG 545
Score = 48.9 bits (115), Expect = 1e-05
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ V
Sbjct: 230 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 288
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ T +L + YD IW D + ST+ H+ I ++ +N G
Sbjct: 289 KDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLA------STLGQHKGPIFALKWNRKG 341
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGN 233
+ + + D+ + D G Q+ + A V + N
Sbjct: 342 NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 382
Score = 37.0 bits (84), Expect = 0.044
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDV----- 182
L GH V + W+P + ++L S D IWNL+ + ++ + C ++
Sbjct: 228 LRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 286
Query: 183 ----ILSMSFNTNGSLLATTCKDRKIRV 206
+ S+ +NTNG+LLAT D R+
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARI 314
>gi|19913367 transducin beta-like 1Y [Homo sapiens]
Length = 522
Score = 72.4 bits (176), Expect = 1e-12
Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P +ASCS+D T+KIWS+ + +L A+ KE+ ++
Sbjct: 357 GHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIY-------TIK 408
Query: 140 WHPT--------AANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT ++ +L SA +D V +W D ++ V T T+ HQ+ + S++F+ +
Sbjct: 409 WSPTGPATSNPNSSIMLASASFDSTVRLW--DVEQGVCT---HTLMKHQEPVYSVAFSPD 463
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + ++G+++ SY+G
Sbjct: 464 GKYLASGSFDKYVHIWNTQSGSLVH--SYQG 492
Score = 45.1 bits (105), Expect = 2e-04
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ V
Sbjct: 177 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 235
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ + +L YD IW + + ST+ H+ I ++ +N G
Sbjct: 236 KDVTSLDWN-SDGTLLAMGSYDGFARIWTENGNLA------STLGQHKGPIFALKWNKKG 288
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNL 234
+ + + D+ + D G Q+ + A V + N+
Sbjct: 289 NYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNM 330
>gi|19913365 transducin beta-like 1Y [Homo sapiens]
Length = 522
Score = 72.4 bits (176), Expect = 1e-12
Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P +ASCS+D T+KIWS+ + +L A+ KE+ ++
Sbjct: 357 GHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIY-------TIK 408
Query: 140 WHPT--------AANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT ++ +L SA +D V +W D ++ V T T+ HQ+ + S++F+ +
Sbjct: 409 WSPTGPATSNPNSSIMLASASFDSTVRLW--DVEQGVCT---HTLMKHQEPVYSVAFSPD 463
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + ++G+++ SY+G
Sbjct: 464 GKYLASGSFDKYVHIWNTQSGSLVH--SYQG 492
Score = 45.1 bits (105), Expect = 2e-04
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ V
Sbjct: 177 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 235
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ + +L YD IW + + ST+ H+ I ++ +N G
Sbjct: 236 KDVTSLDWN-SDGTLLAMGSYDGFARIWTENGNLA------STLGQHKGPIFALKWNKKG 288
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNL 234
+ + + D+ + D G Q+ + A V + N+
Sbjct: 289 NYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNM 330
>gi|15150805 transducin beta-like 1Y [Homo sapiens]
Length = 522
Score = 72.4 bits (176), Expect = 1e-12
Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P +ASCS+D T+KIWS+ + +L A+ KE+ ++
Sbjct: 357 GHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIY-------TIK 408
Query: 140 WHPT--------AANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT ++ +L SA +D V +W D ++ V T T+ HQ+ + S++F+ +
Sbjct: 409 WSPTGPATSNPNSSIMLASASFDSTVRLW--DVEQGVCT---HTLMKHQEPVYSVAFSPD 463
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + ++G+++ SY+G
Sbjct: 464 GKYLASGSFDKYVHIWNTQSGSLVH--SYQG 492
Score = 45.1 bits (105), Expect = 2e-04
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ V
Sbjct: 177 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 235
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ + +L YD IW + + ST+ H+ I ++ +N G
Sbjct: 236 KDVTSLDWN-SDGTLLAMGSYDGFARIWTENGNLA------STLGQHKGPIFALKWNKKG 288
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNL 234
+ + + D+ + D G Q+ + A V + N+
Sbjct: 289 NYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNM 330
>gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo
sapiens]
Length = 514
Score = 72.0 bits (175), Expect = 1e-12
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 23/151 (15%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V +KW+P + +ASCS+D T+KIWS+ + +L A+ KE+ ++
Sbjct: 347 GHTNEVNAIKWDPTGNL-LASCSDDMTLKIWSMKQDNCVHDLQAHNKEIY-------TIK 398
Query: 140 WHPTA-------ANI-LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN 191
W PT AN+ L SA +D V +W++D + T++ HQ+ + S++F+ +
Sbjct: 399 WSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICI-----HTLTKHQEPVYSVAFSPD 453
Query: 192 GSLLATTCKDRKIRVIDPRAGTVLQEASYKG 222
G LA+ D+ + + + + G ++ SY+G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVH--SYRG 482
Score = 49.7 bits (117), Expect = 7e-06
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK-------QLLTRNLTAYRKELVGHA 132
GH V WNP D +AS S D+T +IW++ + QL+ R+ + V
Sbjct: 167 GHESEVFICAWNPVSDL-LASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
+ V ++W+ + +L + YD IW D + ST+ H+ I ++ +N G
Sbjct: 226 KDVTSLDWN-SEGTLLATGSYDGFARIWTKDGNLA------STLGQHKGPIFALKWNKKG 278
Query: 193 SLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGN 233
+ + + D+ + D G Q+ + A V + N
Sbjct: 279 NFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSN 319
Score = 35.0 bits (79), Expect = 0.17
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISC----HQDV- 182
L GH V + W+P + ++L S D IWNL + ++ + C QDV
Sbjct: 165 LRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 183 ----ILSMSFNTNGSLLATTCKDRKIRV 206
+ S+ +N+ G+LLAT D R+
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARI 251
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 15/126 (11%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEW 140
H+G + +KWN +F I S D T IW + +++ H+ V+W
Sbjct: 265 HKGPIFALKWNKKGNF-ILSAGVDKTTIIWD-------AHTGEAKQQFPFHSAPALDVDW 316
Query: 141 HPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCK 200
+ N S D + + L P+ T H + + ++ ++ G+LLA+
Sbjct: 317 Q--SNNTFASCSTDMCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTGNLLASCSD 369
Query: 201 DRKIRV 206
D +++
Sbjct: 370 DMTLKI 375
>gi|23199987 WD repeat domain 5B [Homo sapiens]
Length = 330
Score = 65.5 bits (158), Expect = 1e-10
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 69 GKLDPHYPKVC-GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
G D Y K GH + DV W+ D + S S+D T+K+W + K
Sbjct: 69 GAYDGKYEKTLYGHNLEISDVAWSS-DSSRLVSASDDKTLKLWDVRSGKCL-------KT 120
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
L GH+ V ++P + N++ S +D V IW + T + + T+S H D + ++
Sbjct: 121 LKGHSNYVFCCNFNPPS-NLIISGSFDETVKIWEVKTGKC-----LKTLSAHSDPVSAVH 174
Query: 188 FNTNGSLLATTCKDRKIRVIDPRAGTVLQ 216
FN +GSL+ + D R+ D +G L+
Sbjct: 175 FNCSGSLIVSGSYDGLCRIWDAASGQCLK 203
Score = 39.3 bits (90), Expect = 0.009
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 88 VKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPTAANI 147
VK++P + I + + D T+K+W + + T ++ E + + T
Sbjct: 216 VKFSPNGKY-ILTATLDNTLKLWDYSRGRCLKTYTGHKNE-----KYCIFANFSVTGGKW 269
Query: 148 LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTC--KDRKIR 205
+ S D V IWNL TKE V + H DV++S + + +L+A+ D+ I+
Sbjct: 270 IVSGSEDNLVYIWNLQTKEIV-----QKLQGHTDVVISAACHPTENLIASAALENDKTIK 324
Query: 206 V 206
+
Sbjct: 325 L 325
>gi|16554629 WD repeat domain 5 [Homo sapiens]
Length = 334
Score = 65.1 bits (157), Expect = 2e-10
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 69 GKLDPHYPK-VCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
G D + K + GH+ + DV W+ D + S S+D T+KIW + K
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL-------KT 124
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
L GH+ V ++P + N++ S +D V IW++ T + + T P H D + ++
Sbjct: 125 LKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLP-----AHSDPVSAVH 178
Query: 188 FNTNGSLLATTCKDRKIRVIDPRAGTVLQ 216
FN +GSL+ ++ D R+ D +G L+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 52.8 bits (125), Expect = 8e-07
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 78 VCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGL 137
+ GH V VK++P ++ +AS S D IKIW + K + GH +
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDG-------KFEKTISGHKLGISD 92
Query: 138 VEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLAT 197
V W + +N+L SA D + IW++ + + + T+ H + + +FN +L+ +
Sbjct: 93 VAWS-SDSNLLVSASDDKTLKIWDVSSGKC-----LKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 198 TCKDRKIRVIDPRAGTVLQEASYKGHRASKVLF 230
D +R+ D + G L+ S V F
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Score = 39.7 bits (91), Expect = 0.007
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 88 VKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPTAANI 147
VK++P + +A+ + D T+K+W K + T ++ E + + T
Sbjct: 220 VKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNE-----KYCIFANFSVTGGKW 273
Query: 148 LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTC--KDRKIR 205
+ S D V IWNL TKE V + H DV++S + + +++A+ D+ I+
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIV-----QKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 206 V 206
+
Sbjct: 329 L 329
>gi|16554627 WD repeat domain 5 [Homo sapiens]
Length = 334
Score = 65.1 bits (157), Expect = 2e-10
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 69 GKLDPHYPK-VCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
G D + K + GH+ + DV W+ D + S S+D T+KIW + K
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL-------KT 124
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
L GH+ V ++P + N++ S +D V IW++ T + + T P H D + ++
Sbjct: 125 LKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLP-----AHSDPVSAVH 178
Query: 188 FNTNGSLLATTCKDRKIRVIDPRAGTVLQ 216
FN +GSL+ ++ D R+ D +G L+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 52.8 bits (125), Expect = 8e-07
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 78 VCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGL 137
+ GH V VK++P ++ +AS S D IKIW + K + GH +
Sbjct: 41 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDG-------KFEKTISGHKLGISD 92
Query: 138 VEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLAT 197
V W + +N+L SA D + IW++ + + + T+ H + + +FN +L+ +
Sbjct: 93 VAWS-SDSNLLVSASDDKTLKIWDVSSGKC-----LKTLKGHSNYVFCCNFNPQSNLIVS 146
Query: 198 TCKDRKIRVIDPRAGTVLQEASYKGHRASKVLF 230
D +R+ D + G L+ S V F
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Score = 39.7 bits (91), Expect = 0.007
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 88 VKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPTAANI 147
VK++P + +A+ + D T+K+W K + T ++ E + + T
Sbjct: 220 VKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNE-----KYCIFANFSVTGGKW 273
Query: 148 LFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTC--KDRKIR 205
+ S D V IWNL TKE V + H DV++S + + +++A+ D+ I+
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIV-----QKLQGHTDVVISTACHPTENIIASAALENDKTIK 328
Query: 206 V 206
+
Sbjct: 329 L 329
>gi|4506439 retinoblastoma binding protein 7 [Homo sapiens]
Length = 425
Score = 64.3 bits (155), Expect = 3e-10
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 23/272 (8%)
Query: 16 FGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGKLDPHY 75
FG K C + V+ + NPH IA T+ + K DP
Sbjct: 107 FGSVTGKIECEIKINHEGEVNRARYMPQNPHIIA--TKTPSSDVLVFDYTKHPAKPDPSG 164
Query: 76 P-----KVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVG 130
++ GH+ + WN + S S+D T+ +W I + + G
Sbjct: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG 224
Query: 131 HARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNT 190
H+ V V WH ++ S D K+MIW DT+ + + P + H + +SFN
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIW--DTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
Query: 191 NGS-LLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFL-----GNLKKLMSTGTSR 244
+LAT D+ + + D R L+ +++ H+ +F N L S+GT
Sbjct: 283 YSEFILATGSADKTVALWDLR-NLKLKLHTFESHKDE--IFQVHWSPHNETILASSGT-- 337
Query: 245 WNNRQVALWDQDNLSVPLMEEDL-DGSSGVLF 275
+R++ +WD + ED DG +LF
Sbjct: 338 --DRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
Score = 38.1 bits (87), Expect = 0.020
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 13/106 (12%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK---QLLTRNLTAYRKELV----GHAR 133
H+ + V W+P ++ +AS D + +W + K + + EL+ GH
Sbjct: 315 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 374
Query: 134 RVGLVEWHPTAANILFSAGYDYKVMIWNL------DTKESVITSPM 173
++ W+P ++ S D + IW + D + V TS +
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 420
Score = 35.0 bits (79), Expect = 0.17
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQL 116
GH + D WNP + + I S SED ++IW + + +
Sbjct: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>gi|207029439 retinoblastoma binding protein 4 isoform c [Homo
sapiens]
Length = 390
Score = 63.2 bits (152), Expect = 6e-10
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
+G+ +P ++ GH+ + WNP + S S+D TI +W I + +
Sbjct: 129 SGECNPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 187
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
GH V V WH ++ S D K+MIW DT+ + + P ++ H + +S
Sbjct: 188 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW--DTRSNNTSKPSHSVDAHTAEVNCLS 245
Query: 188 FNTNGS-LLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFL-----GNLKKLMSTG 241
FN +LAT D+ + + D R L+ S++ H+ +F N L S+G
Sbjct: 246 FNPYSEFILATGSADKTVALWDLR-NLKLKLHSFESHKDE--IFQVQWSPHNETILASSG 302
Query: 242 TSRWNNRQVALWDQDNLSVPLMEEDL-DGSSGVLF 275
T +R++ +WD + ED DG +LF
Sbjct: 303 T----DRRLNVWDLSKIGEEQSPEDAEDGPPELLF 333
Score = 37.4 bits (85), Expect = 0.034
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK---QLLTRNLTAYRKELV----GHAR 133
H+ + V+W+P ++ +AS D + +W + K + + EL+ GH
Sbjct: 281 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 340
Query: 134 RVGLVEWHPTAANILFSAGYDYKVMIWNL 162
++ W+P ++ S D + +W +
Sbjct: 341 KISDFSWNPNEPWVICSVSEDNIMQVWQM 369
Score = 34.7 bits (78), Expect = 0.22
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQL 116
GH + D WNP + + I S SED +++W + + +
Sbjct: 337 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 373
>gi|207029415 retinoblastoma binding protein 4 isoform b [Homo
sapiens]
Length = 424
Score = 63.2 bits (152), Expect = 6e-10
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
+G+ +P ++ GH+ + WNP + S S+D TI +W I + +
Sbjct: 163 SGECNPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 221
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
GH V V WH ++ S D K+MIW DT+ + + P ++ H + +S
Sbjct: 222 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW--DTRSNNTSKPSHSVDAHTAEVNCLS 279
Query: 188 FNTNGS-LLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFL-----GNLKKLMSTG 241
FN +LAT D+ + + D R L+ S++ H+ +F N L S+G
Sbjct: 280 FNPYSEFILATGSADKTVALWDLR-NLKLKLHSFESHKDE--IFQVQWSPHNETILASSG 336
Query: 242 TSRWNNRQVALWDQDNLSVPLMEEDL-DGSSGVLF 275
T +R++ +WD + ED DG +LF
Sbjct: 337 T----DRRLNVWDLSKIGEEQSPEDAEDGPPELLF 367
Score = 37.4 bits (85), Expect = 0.034
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK---QLLTRNLTAYRKELV----GHAR 133
H+ + V+W+P ++ +AS D + +W + K + + EL+ GH
Sbjct: 315 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 374
Query: 134 RVGLVEWHPTAANILFSAGYDYKVMIWNL 162
++ W+P ++ S D + +W +
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQVWQM 403
Score = 34.7 bits (78), Expect = 0.22
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQL 116
GH + D WNP + + I S SED +++W + + +
Sbjct: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 407
>gi|5032027 retinoblastoma binding protein 4 isoform a [Homo
sapiens]
Length = 425
Score = 63.2 bits (152), Expect = 6e-10
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
+G+ +P ++ GH+ + WNP + S S+D TI +W I + +
Sbjct: 164 SGECNPDL-RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Query: 128 LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMS 187
GH V V WH ++ S D K+MIW DT+ + + P ++ H + +S
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW--DTRSNNTSKPSHSVDAHTAEVNCLS 280
Query: 188 FNTNGS-LLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFL-----GNLKKLMSTG 241
FN +LAT D+ + + D R L+ S++ H+ +F N L S+G
Sbjct: 281 FNPYSEFILATGSADKTVALWDLR-NLKLKLHSFESHKDE--IFQVQWSPHNETILASSG 337
Query: 242 TSRWNNRQVALWDQDNLSVPLMEEDL-DGSSGVLF 275
T +R++ +WD + ED DG +LF
Sbjct: 338 T----DRRLNVWDLSKIGEEQSPEDAEDGPPELLF 368
Score = 37.4 bits (85), Expect = 0.034
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK---QLLTRNLTAYRKELV----GHAR 133
H+ + V+W+P ++ +AS D + +W + K + + EL+ GH
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA 375
Query: 134 RVGLVEWHPTAANILFSAGYDYKVMIWNL 162
++ W+P ++ S D + +W +
Sbjct: 376 KISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 34.7 bits (78), Expect = 0.22
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQL 116
GH + D WNP + + I S SED +++W + + +
Sbjct: 372 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>gi|7657439 PCAF associated factor 65 beta isoform a [Homo sapiens]
Length = 589
Score = 60.1 bits (144), Expect = 5e-09
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V D+ +P+ + AS S D T ++WS + T L Y GH V V+
Sbjct: 382 GHAYPVWDLDISPYSLY-FASGSHDRTARLWSFDR---TYPLRIY----AGHLADVDCVK 433
Query: 140 WHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTC 199
+HP + N L + D V +W+ SV + H+ +LS++F+ NG LA+
Sbjct: 434 FHPNS-NYLATGSTDKTVRLWSAQQGNSV-----RLFTGHRGPVLSLAFSPNGKYLASAG 487
Query: 200 KDRKIRVIDPRAGTVLQEASYKGHRASKVLFLGNLKKLMSTGTSRWNNRQVALWDQDNLS 259
+D+++++ D +GT+ +E + + F + + S + V +WD N
Sbjct: 488 EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASM----DNSVRVWDIRN-- 541
Query: 260 VPLMEEDLDGSSGVLFPFYDADTS 283
DGSS L Y S
Sbjct: 542 -TYCSAPADGSSSELVGVYTGQMS 564
Score = 50.4 bits (119), Expect = 4e-06
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH G V ++ D + SCSED +I+ W + N Y+ GHA V ++
Sbjct: 340 GHCGPVYSTRFLA-DSSGLLSCSEDMSIRYWDLGS---FTNTVLYQ----GHAYPVWDLD 391
Query: 140 WHPTAANILFSAG-YDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATT 198
P ++ F++G +D +W+ D T P+ + H + + F+ N + LAT
Sbjct: 392 ISP--YSLYFASGSHDRTARLWSFDR-----TYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 199 CKDRKIRVIDPRAGTVLQEASYKGHRAS--KVLFLGNLKKLMSTGTSRWNNRQVALWDQD 256
D+ +R+ + G ++ + GHR + F N K L S G ++++ LWD
Sbjct: 445 STDKTVRLWSAQQGNSVR--LFTGHRGPVLSLAFSPNGKYLASAG----EDQRLKLWD-- 496
Query: 257 NLSVPLMEEDLDGSSGVLFPFYDADTSMLYVVGKGDGNIRYYEV 300
L+ + ++L G + + + S L D ++R +++
Sbjct: 497 -LASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 59.3 bits (142), Expect = 8e-09
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELV-GHARRVGLVE 139
H+ + + ++P D+ + A+CS+D T++IW L + + ++ GH V V+
Sbjct: 201 HKEAIREASFSPTDN-KFATCSDDGTVRIWDF--------LRCHEERILRGHGADVKCVD 251
Query: 140 WHPTAANILF-SAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATT 198
WHPT ++ S + W+ T +S ++T+ H++ ++ + N NG+ L T
Sbjct: 252 WHPTKGLVVSGSKDSQQPIKFWDPKTGQS-----LATLHAHKNTVMEVKLNLNGNWLLTA 306
Query: 199 CKDRKIRVIDPRAGTVLQEAS-YKGHR 224
+D ++ D R + +E ++GH+
Sbjct: 307 SRDHLCKLFDIR--NLKEELQVFRGHK 331
Score = 45.8 bits (107), Expect = 1e-04
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEW 140
H+ V++VK N ++ + + S D K++ I RNL + GH + V W
Sbjct: 287 HKNTVMEVKLNLNGNW-LLTASRDHLCKLFDI------RNLKEELQVFRGHKKEATAVAW 339
Query: 141 HPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCK 200
HP + S G D ++ W++ ++ V M+ H+ +I S++++ G +L +
Sbjct: 340 HPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA----HEGMIWSLAWHPLGHILCSGSN 395
Query: 201 D 201
D
Sbjct: 396 D 396
Score = 31.2 bits (69), Expect = 2.4
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVG----HARRV 135
GH+ V W+P + AS D ++ W + KE+ G H +
Sbjct: 329 GHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV----------GVEKEVGGMEMAHEGMI 378
Query: 136 GLVEWHPTAANILFSAGYDYKVMIW 160
+ WHP +IL S D+ W
Sbjct: 379 WSLAWHP-LGHILCSGSNDHTSKFW 402
>gi|4757988 WD repeat domain 39 [Homo sapiens]
Length = 339
Score = 57.4 bits (137), Expect = 3e-08
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH V V W P + +A+CS D ++ +W + ++ ++ L H + V V
Sbjct: 103 GHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECVSV----LNSHTQDVKHVV 157
Query: 140 WHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTC 199
WHP + +L SA YD V ++ + + V +T+ H+ + S++F+ +G LA+
Sbjct: 158 WHP-SQELLASASYDDTVKLYREEEDDWVC---CATLEGHESTVWSLAFDPSGQRLASCS 213
Query: 200 KDRKIRV 206
DR +R+
Sbjct: 214 DDRTVRI 220
Score = 52.8 bits (125), Expect = 8e-07
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 25/125 (20%)
Query: 90 WNPFDDFEIASCSEDATIKIWS------IPKQLLTRNLTAYRKELVGHARRVGLVEWHPT 143
WNP +ASC D I+IW I K +L+ GH R V V W P
Sbjct: 24 WNPAGTL-LASCGGDRRIRIWGTEGDSWICKSVLSE----------GHQRTVRKVAWSP- 71
Query: 144 AANILFSAGYDYKVMIW--NLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCKD 201
N L SA +D IW N D E V +T+ H++ + S+++ +G+LLAT +D
Sbjct: 72 CGNYLASASFDATTCIWKKNQDDFECV-----TTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 202 RKIRV 206
+ + V
Sbjct: 127 KSVWV 131
Score = 36.6 bits (83), Expect = 0.058
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 72 DPHYPKVCG----HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK---QLLTRNLTAY 124
DP + +C H + D+ W +C +DA P Q T +LTA+
Sbjct: 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAH 297
Query: 125 RKELVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESV 168
+ H++ V V W+P +L S D +V W E +
Sbjct: 298 LHQ--AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339
Score = 32.3 bits (72), Expect = 1.1
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 13/86 (15%)
Query: 32 TRSVHDNHFCAVNPHFIAVVTECAGGGAFLVI-------PLHQTGKLDPHYPKVCGHRGN 84
+R+++D +C + A+ T C G A V P T L H + H +
Sbjct: 252 SRTIYDIAWCQLTG---ALATAC-GDDAIRVFQEDPNSDPQQPTFSLTAHLHQA--HSQD 305
Query: 85 VLDVKWNPFDDFEIASCSEDATIKIW 110
V V WNP + +ASCS+D + W
Sbjct: 306 VNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 29.6 bits (65), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIW 110
GH V + ++P +ASCS+D T++IW
Sbjct: 192 GHESTVWSLAFDPSGQ-RLASCSDDRTVRIW 221
>gi|113865883 WD repeat domain 38 [Homo sapiens]
Length = 314
Score = 56.6 bits (135), Expect = 5e-08
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH G V +++P D AS S D T+++W + + R L GH R V V
Sbjct: 61 GHTGPVKFCRFSP-DGHLFASASCDCTVRLWDVARAKCLR-------VLKGHQRSVETVS 112
Query: 140 WHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTC 199
+ P + L S G+D +VM+W++ + + + + H+D I S F+ + LAT
Sbjct: 113 FSPDSRQ-LASGGWDKRVMLWDVQSGQM-----LRLLVGHRDSIQSSDFSPTVNCLATGS 166
Query: 200 KDRKIRVIDPRAGT-VLQEASYKGHRASKVLFLGNLKKLMSTGTSRWNNRQVALW 253
D + + D R T + + +GH A+ + L+++G+ W ++ + +W
Sbjct: 167 WDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGLLASGS--W-DKTIHIW 218
Score = 33.5 bits (75), Expect = 0.49
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 98 IASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPTAANILFSAGYDYKV 157
+AS S D TI IW L +L GH V + + P L SAGY V
Sbjct: 206 LASGSWDKTIHIWKPTTSSLLI-------QLKGHVTWVKSIAFSPDEL-WLASAGYSRMV 257
Query: 158 MIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCKDRKIRVI 207
+W+ +T + + T+ DV + +F +G +L + D+ R I
Sbjct: 258 KVWDCNTGKC-----LETLKGVLDVAHTCAFTPDGKILVSGAADQTRRQI 302
>gi|4505731 peroxisomal biogenesis factor 7 [Homo sapiens]
Length = 323
Score = 55.8 bits (133), Expect = 9e-08
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 81 HRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEW 140
H+ +L W +++ + + + D +++ W + RN+ EL+GH + V++
Sbjct: 197 HQAEILSCDWCKYNENLLVTGAVDCSLRGWDL------RNVRQPVFELLGHTYAIRRVKF 250
Query: 141 HPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCK 200
P A++L S YD+ V WN +S+ + T+ H + + F+ C
Sbjct: 251 SPFHASVLASCSYDFTVRFWNFSKPDSL----LETVEHHTEFTCGLDFSLQSPTQVADCS 306
Query: 201 -DRKIRVIDPRAGTV 214
D I++ DP T+
Sbjct: 307 WDETIKIYDPACLTI 321
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 85 VLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEWHPT- 143
+ DV W+ ++ + +CS D ++++W K L Y++ HA+ V V+W T
Sbjct: 70 LFDVTWSENNEHVLITCSGDGSLQLWDTAK--AAGPLQVYKE----HAQEVYSVDWSQTR 123
Query: 144 AANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTN-GSLLATTCKDR 202
++ S +D V +W + + + T H+ +I S ++ + A+ D+
Sbjct: 124 GEQLVVSGSWDQTVKLW-----DPTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQ 178
Query: 203 KIRVIDPRAGTV 214
+R+ D +A V
Sbjct: 179 TLRIWDVKAAGV 190
Score = 33.9 bits (76), Expect = 0.37
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 77 KVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPK 114
++ GH + VK++PF +ASCS D T++ W+ K
Sbjct: 237 ELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
>gi|24431950 PRP4 pre-mRNA processing factor 4 homolog [Homo
sapiens]
Length = 522
Score = 55.5 bits (132), Expect = 1e-07
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 80 GHRGNVLDVKWNPFD-------DFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHA 132
GH NV + ++P D +ASC+ D ++K+WS+ ++ GH
Sbjct: 271 GHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPV-------ADIEGHT 323
Query: 133 RRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNG 192
RV V WHP + L + YD +W+L+ +E ++ H + ++F+ +G
Sbjct: 324 VRVARVMWHP-SGRFLGTTCYDRSWRLWDLEAQEEILHQ-----EGHSMGVYDIAFHQDG 377
Query: 193 SLLATTCKDRKIRVIDPRAG 212
SL T D RV D R G
Sbjct: 378 SLAGTGGLDAFGRVWDLRTG 397
Score = 53.1 bits (126), Expect = 6e-07
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVE 139
GH + + ++P + + IA+ S D T K+W + ++ + A++ + G V+
Sbjct: 405 GHLKEIYGINFSP-NGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTG-------VK 456
Query: 140 WHPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTC 199
+ P N L + YD IW SP+ T++ H+ ++ + +++G L+AT
Sbjct: 457 FEPIHGNFLLTGAYDNTAKIWTHPG-----WSPLKTLAGHEGKVMGLDISSDGQLIATCS 511
Query: 200 KDRKIRV 206
DR ++
Sbjct: 512 YDRTFKL 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,836,706
Number of Sequences: 37866
Number of extensions: 1033580
Number of successful extensions: 4141
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 3342
Number of HSP's gapped (non-prelim): 657
length of query: 525
length of database: 18,247,518
effective HSP length: 107
effective length of query: 418
effective length of database: 14,195,856
effective search space: 5933867808
effective search space used: 5933867808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.