Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 164663778
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens]
(395 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens] 790 0.0
gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens] 774 0.0
gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens] 736 0.0
gi|13375981 zinc finger protein 385D [Homo sapiens] 460 e-129
gi|195972903 zinc finger protein 385A isoform a [Homo sapiens] 329 3e-90
gi|24308079 zinc finger protein 385A isoform c [Homo sapiens] 325 6e-89
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 282 3e-76
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 282 3e-76
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 282 3e-76
gi|195972905 zinc finger protein 385A isoform b [Homo sapiens] 172 6e-43
gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens] 65 1e-10
gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens] 62 1e-09
gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens] 61 2e-09
gi|34101286 zinc finger RNA binding protein [Homo sapiens] 53 5e-07
gi|6912440 zinc finger protein 346 [Homo sapiens] 51 2e-06
gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens] 48 1e-05
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens] 46 7e-05
gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo s... 44 3e-04
gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo ... 44 3e-04
gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo ... 44 3e-04
gi|153266778 arg tyrosine kinase isoform c [Homo sapiens] 43 4e-04
gi|6382062 arg tyrosine kinase isoform b [Homo sapiens] 43 4e-04
gi|209862772 arg tyrosine kinase isoform d [Homo sapiens] 43 4e-04
gi|153266757 arg tyrosine kinase isoform a [Homo sapiens] 43 4e-04
gi|154146199 sal-like 3 [Homo sapiens] 43 4e-04
gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo ... 43 6e-04
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 42 0.001
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 41 0.002
gi|189217876 sal-like 1 isoform b [Homo sapiens] 41 0.002
gi|118442837 sal-like 1 isoform a [Homo sapiens] 41 0.002
>gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens]
Length = 395
Score = 790 bits (2041), Expect = 0.0
Identities = 395/395 (100%), Positives = 395/395 (100%)
Query: 1 MWSGLPSRGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPV 60
MWSGLPSRGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPV
Sbjct: 1 MWSGLPSRGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPV 60
Query: 61 QKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPK 120
QKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPK
Sbjct: 61 QKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPK 120
Query: 121 MVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPP 180
MVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPP
Sbjct: 121 MVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPP 180
Query: 181 GAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEAR 240
GAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEAR
Sbjct: 181 GAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEAR 240
Query: 241 NGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 300
NGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV
Sbjct: 241 NGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 300
Query: 301 AGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPR 360
AGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPR
Sbjct: 301 AGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPR 360
Query: 361 PSASLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
PSASLFQAPAIPPALLRPGHGPIRATPASILFAPY
Sbjct: 361 PSASLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
>gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens]
Length = 471
Score = 774 bits (1998), Expect = 0.0
Identities = 388/389 (99%), Positives = 388/389 (99%)
Query: 7 SRGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVIN 66
S GSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVIN
Sbjct: 83 STGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVIN 142
Query: 67 HTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKD 126
HTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKD
Sbjct: 143 HTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKD 202
Query: 127 SAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSP 186
SAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSP
Sbjct: 203 SAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSP 262
Query: 187 SKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPI 246
SKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPI
Sbjct: 263 SKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPI 322
Query: 247 KSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLK 306
KSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLK
Sbjct: 323 KSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLK 382
Query: 307 PKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLF 366
PKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLF
Sbjct: 383 PKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLF 442
Query: 367 QAPAIPPALLRPGHGPIRATPASILFAPY 395
QAPAIPPALLRPGHGPIRATPASILFAPY
Sbjct: 443 QAPAIPPALLRPGHGPIRATPASILFAPY 471
Score = 61.6 bits (148), Expect = 1e-09
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 76 KKKQVIS-CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSC 134
KKK + S C VC ++ NS +QA+ H G H K+VK L + P P++ S +N S
Sbjct: 28 KKKILFSFCEVCNIQLNSAAQAQVHSNGKSHRKRVKQLSDGQPPP---PAQASPSSNSS- 83
Query: 135 SITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLL----KSGTTPLPPGAATSPSKST 190
TG+ + ++ + S + F+ S L P T
Sbjct: 84 -----TGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQK 138
Query: 191 NGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEA 239
T S K K+++ C++C++ NS SQ EAH GSKH V+A
Sbjct: 139 AVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKA 187
Score = 39.7 bits (91), Expect = 0.005
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 200 SEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKMQ 259
S+E+K +C +C + +NS +Q + H+ G H+ V+ + P P P
Sbjct: 25 SKEKKKILFSFCEVCNIQLNSAAQAQVHSNGKSHRKRVKQLSDGQP----PPPAQASPSS 80
Query: 260 NGSKGSGLQNKT 271
N S GS T
Sbjct: 81 NSSTGSTCHTTT 92
Score = 32.0 bits (71), Expect = 1.00
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 274 CEICDVHVNSEIQLKQHISSRRHKDRVA----GKPLKP-KYSPYNKLQRS----PSILAA 324
CE+C++ +NS Q + H + + H+ RV G+P P + SP + + L A
Sbjct: 36 CEVCNIQLNSAAQAQVHSNGKSHRKRVKQLSDGQPPPPAQASPSSNSSTGSTCHTTTLPA 95
Query: 325 KLAFQKDMMKPL--APAFLSSPLAAAAAV 351
+ MM+P F+S P+ +++AV
Sbjct: 96 LVRTPTLMMQPSLDIKPFMSFPVDSSSAV 124
>gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens]
Length = 369
Score = 736 bits (1899), Expect = 0.0
Identities = 369/369 (100%), Positives = 369/369 (100%)
Query: 27 MMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVC 86
MMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVC
Sbjct: 1 MMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVC 60
Query: 87 QLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGNNSDK 146
QLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGNNSDK
Sbjct: 61 QLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGNNSDK 120
Query: 147 SEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEKAK 206
SEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEKAK
Sbjct: 121 SEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEKAK 180
Query: 207 KLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKMQNGSKGSG 266
KLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKMQNGSKGSG
Sbjct: 181 KLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKMQNGSKGSG 240
Query: 267 LQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKL 326
LQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKL
Sbjct: 241 LQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKL 300
Query: 327 AFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGPIRAT 386
AFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGPIRAT
Sbjct: 301 AFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGPIRAT 360
Query: 387 PASILFAPY 395
PASILFAPY
Sbjct: 361 PASILFAPY 369
>gi|13375981 zinc finger protein 385D [Homo sapiens]
Length = 395
Score = 460 bits (1183), Expect = e-129
Identities = 236/392 (60%), Positives = 282/392 (71%), Gaps = 9/392 (2%)
Query: 9 GSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHT 68
G TC + LPALVR P +QPSLDIKPF+ FP+D+++AV LFPNFN MDP+QKAVINHT
Sbjct: 8 GGTCQSPALPALVRPPAPPLQPSLDIKPFLPFPLDTAAAVNLFPNFNAMDPIQKAVINHT 67
Query: 69 FGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSA 128
FGV +P ++KQ+ISCN+CQLRFNSDSQA AHYKG+KHAKK+KAL+A KNK K V +KDSA
Sbjct: 68 FGVPLPHRRKQIISCNICQLRFNSDSQAAAHYKGTKHAKKLKALEAMKNKQKSVTAKDSA 127
Query: 129 KANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSK 188
K + T +SDK++ A S++ S + TT + SP+
Sbjct: 128 KTTFTSITTNTINTSSDKTDGTAGTPAISTTTTVEIRKSSVM----TTEITSKVEKSPTT 183
Query: 189 STNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKS 248
+T + E+EEEKAK+LLYCSLCKVAVNS SQLEAHN+G+KHKTM+EARNG+G IK+
Sbjct: 184 ATGNSSCPSTETEEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGTIKA 243
Query: 249 YPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPK 308
+PR G + K +GLQNKTFHCEICDVHVNSE QLKQHISSRRHKDR AGKP KPK
Sbjct: 244 FPRAGVKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAAGKPPKPK 303
Query: 309 YSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAA-----AVSSALSLPPRPSA 363
YSPYNKLQ++ L KL F K+ KPLAP L +PLAAAA AVSS SL P+A
Sbjct: 304 YSPYNKLQKTAHPLGVKLVFSKEPSKPLAPRILPNPLAAAAAAAAVAVSSPFSLRTAPAA 363
Query: 364 SLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
+LFQ A+PPALLRP GPIR +LFAPY
Sbjct: 364 TLFQTSALPPALLRPAPGPIRTAHTPVLFAPY 395
>gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]
Length = 386
Score = 329 bits (843), Expect = 3e-90
Identities = 195/403 (48%), Positives = 246/403 (61%), Gaps = 36/403 (8%)
Query: 9 GSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHT 68
GS LP L + P +MQP LD+K + FP++ + +GLF N++TMDPVQKAV++HT
Sbjct: 4 GSLSRAGPLPLLRQPP--IMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHT 61
Query: 69 FGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSA 128
FG + K+ VISCN+CQ+RFNS SQAEAHYKG++HA++VK ++A K + + ++
Sbjct: 62 FGGPLLKTKRPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPG 121
Query: 129 KANPSCSITPITG-----------NNSDKSEDKGKLKASSSSQPSSSESGSFLLK-SGTT 176
P S TP G N + + + S S PS E+G + K G T
Sbjct: 122 DPAPPGS-TPTNGDGVAPRPVSMENGLGPAPGSPEKQPGSPSPPSIPETGQGVTKGEGGT 180
Query: 177 PLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM 236
P P A+ P S + EEEKAK+LLYC+LCKVAVNSLSQLEAHN G+KHKT+
Sbjct: 181 PAP---ASLPGGS---------KEEEEKAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTI 228
Query: 237 VEARNGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRH 296
+EAR+G GPIK+YPR G G + Q++TFHCEIC+V VNSE+QLKQHISSRRH
Sbjct: 229 LEARSGLGPIKAYPRLGPPTP---GEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRH 285
Query: 297 KDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAA----AAAVS 352
+D VAGKP P S + K R LA L F K++ K LA L SPLA AAA
Sbjct: 286 RDGVAGKP-NPLLSRHKK-SRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAG 343
Query: 353 SALSLPPRPSASLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
S LSL P P+A L Q P I LL P GPIR ILF+PY
Sbjct: 344 SPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPILFSPY 386
>gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]
Length = 366
Score = 325 bits (832), Expect = 6e-89
Identities = 189/384 (49%), Positives = 238/384 (61%), Gaps = 34/384 (8%)
Query: 28 MQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVCQ 87
MQP LD+K + FP++ + +GLF N++TMDPVQKAV++HTFG + K+ VISCN+CQ
Sbjct: 1 MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPLLKTKRPVISCNICQ 60
Query: 88 LRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITG------ 141
+RFNS SQAEAHYKG++HA++VK ++A K + + ++ P S TP G
Sbjct: 61 IRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGS-TPTNGDGVAPR 119
Query: 142 -----NNSDKSEDKGKLKASSSSQPSSSESGSFLLK-SGTTPLPPGAATSPSKSTNGAPG 195
N + + + S S PS E+G + K G TP P A+ P S
Sbjct: 120 PVSMENGLGPAPGSPEKQPGSPSPPSIPETGQGVTKGEGGTPAP---ASLPGGS------ 170
Query: 196 TVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSR 255
+ EEEKAK+LLYC+LCKVAVNSLSQLEAHN G+KHKT++EAR+G GPIK+YPR G
Sbjct: 171 ---KEEEEKAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTILEARSGLGPIKAYPRLGPP 227
Query: 256 LKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKL 315
G + Q++TFHCEIC+V VNSE+QLKQHISSRRH+D VAGKP P S + K
Sbjct: 228 TP---GEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKP-NPLLSRHKK- 282
Query: 316 QRSPSILAAKLAFQKDMMKPLAPAFLSSPLAA----AAAVSSALSLPPRPSASLFQAPAI 371
R LA L F K++ K LA L SPLA AAA S LSL P P+A L Q P I
Sbjct: 283 SRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPI 342
Query: 372 PPALLRPGHGPIRATPASILFAPY 395
LL P GPIR ILF+PY
Sbjct: 343 THPLLHPAPGPIRTAHGPILFSPY 366
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 282 bits (722), Expect = 3e-76
Identities = 179/418 (42%), Positives = 239/418 (57%), Gaps = 47/418 (11%)
Query: 17 LPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPK 76
L A + PT +QP LD K ++F + ++ + LFPNF+TMDPVQKAVI+HTFGV P K
Sbjct: 673 LLASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQKAVISHTFGVPSPLK 732
Query: 77 KKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSI 136
KK ISCN+C LRFNS +QAEAHYKG KHA+K+KA++A K+K + +A +
Sbjct: 733 KKLFISCNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKSK-----QRPHTQAQDGAVV 787
Query: 137 TPI-TGNNSDKSEDKGKLKAS---------------SSSQPSSSESGSFLLKSGTTPLPP 180
+PI T + E + K+ A+ + +P+ SE S ++ PP
Sbjct: 788 SPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPP 847
Query: 181 GAATSPSKSTNG------APGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 234
+ P + G A G+ + E K LYC CKV VNS SQL+AHNTG+KH+
Sbjct: 848 -CSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTCKVTVNSASQLQAHNTGAKHR 906
Query: 235 TMVEARNGAGPIKSYPRPGSR-------LKMQNGSKGSGLQNKTFHCEICDVHVNSEIQL 287
M+E + GA P +S RP SR ++ G G + FHC +C + VNSE QL
Sbjct: 907 WMMEGQRGA-PRRSRGRPVSRGGAGHKAKRVTGGRGGRQGPSPAFHCALCQLQVNSETQL 965
Query: 288 KQHISSRRHKDRVAGKPLKPKYSPYNKLQR----SPSILAAKLAFQKDMMKPLAPAFLSS 343
KQH+SSRRHKDR+AGK KP S ++KLQ+ + SIL +KLA QK + K LA FL S
Sbjct: 966 KQHMSSRRHKDRLAGKTPKPS-SQHSKLQKHAALAVSILKSKLALQKQLTKTLAARFLPS 1024
Query: 344 PLAAAA----AVSSALSLPPRPSA--SLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
PL AA A+ L+L P P+A +LF AP + PAL R G +R I+ APY
Sbjct: 1025 PLPTAATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGAVRPATGPIVLAPY 1082
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 282 bits (722), Expect = 3e-76
Identities = 179/418 (42%), Positives = 239/418 (57%), Gaps = 47/418 (11%)
Query: 17 LPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPK 76
L A + PT +QP LD K ++F + ++ + LFPNF+TMDPVQKAVI+HTFGV P K
Sbjct: 673 LLASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQKAVISHTFGVPSPLK 732
Query: 77 KKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSI 136
KK ISCN+C LRFNS +QAEAHYKG KHA+K+KA++A K+K + +A +
Sbjct: 733 KKLFISCNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKSK-----QRPHTQAQDGAVV 787
Query: 137 TPI-TGNNSDKSEDKGKLKAS---------------SSSQPSSSESGSFLLKSGTTPLPP 180
+PI T + E + K+ A+ + +P+ SE S ++ PP
Sbjct: 788 SPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPP 847
Query: 181 GAATSPSKSTNG------APGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 234
+ P + G A G+ + E K LYC CKV VNS SQL+AHNTG+KH+
Sbjct: 848 -CSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTCKVTVNSASQLQAHNTGAKHR 906
Query: 235 TMVEARNGAGPIKSYPRPGSR-------LKMQNGSKGSGLQNKTFHCEICDVHVNSEIQL 287
M+E + GA P +S RP SR ++ G G + FHC +C + VNSE QL
Sbjct: 907 WMMEGQRGA-PRRSRGRPVSRGGAGHKAKRVTGGRGGRQGPSPAFHCALCQLQVNSETQL 965
Query: 288 KQHISSRRHKDRVAGKPLKPKYSPYNKLQR----SPSILAAKLAFQKDMMKPLAPAFLSS 343
KQH+SSRRHKDR+AGK KP S ++KLQ+ + SIL +KLA QK + K LA FL S
Sbjct: 966 KQHMSSRRHKDRLAGKTPKPS-SQHSKLQKHAALAVSILKSKLALQKQLTKTLAARFLPS 1024
Query: 344 PLAAAA----AVSSALSLPPRPSA--SLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
PL AA A+ L+L P P+A +LF AP + PAL R G +R I+ APY
Sbjct: 1025 PLPTAATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGAVRPATGPIVLAPY 1082
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 282 bits (722), Expect = 3e-76
Identities = 179/418 (42%), Positives = 239/418 (57%), Gaps = 47/418 (11%)
Query: 17 LPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPK 76
L A + PT +QP LD K ++F + ++ + LFPNF+TMDPVQKAVI+HTFGV P K
Sbjct: 673 LLASLPLPTRPLQPPLDFKHLLAFHFNGAAPLSLFPNFSTMDPVQKAVISHTFGVPSPLK 732
Query: 77 KKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSI 136
KK ISCN+C LRFNS +QAEAHYKG KHA+K+KA++A K+K + +A +
Sbjct: 733 KKLFISCNICHLRFNSANQAEAHYKGHKHARKLKAVEAAKSK-----QRPHTQAQDGAVV 787
Query: 137 TPI-TGNNSDKSEDKGKLKAS---------------SSSQPSSSESGSFLLKSGTTPLPP 180
+PI T + E + K+ A+ + +P+ SE S ++ PP
Sbjct: 788 SPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDAASSSSSSSCPP 847
Query: 181 GAATSPSKSTNG------APGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 234
+ P + G A G+ + E K LYC CKV VNS SQL+AHNTG+KH+
Sbjct: 848 -CSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTCKVTVNSASQLQAHNTGAKHR 906
Query: 235 TMVEARNGAGPIKSYPRPGSR-------LKMQNGSKGSGLQNKTFHCEICDVHVNSEIQL 287
M+E + GA P +S RP SR ++ G G + FHC +C + VNSE QL
Sbjct: 907 WMMEGQRGA-PRRSRGRPVSRGGAGHKAKRVTGGRGGRQGPSPAFHCALCQLQVNSETQL 965
Query: 288 KQHISSRRHKDRVAGKPLKPKYSPYNKLQR----SPSILAAKLAFQKDMMKPLAPAFLSS 343
KQH+SSRRHKDR+AGK KP S ++KLQ+ + SIL +KLA QK + K LA FL S
Sbjct: 966 KQHMSSRRHKDRLAGKTPKPS-SQHSKLQKHAALAVSILKSKLALQKQLTKTLAARFLPS 1024
Query: 344 PLAAAA----AVSSALSLPPRPSA--SLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
PL AA A+ L+L P P+A +LF AP + PAL R G +R I+ APY
Sbjct: 1025 PLPTAATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGAVRPATGPIVLAPY 1082
>gi|195972905 zinc finger protein 385A isoform b [Homo sapiens]
Length = 305
Score = 172 bits (435), Expect = 6e-43
Identities = 138/398 (34%), Positives = 182/398 (45%), Gaps = 107/398 (26%)
Query: 9 GSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHT 68
GS LP L + P +MQP LD+K + FP++ + +GLF N++TMD
Sbjct: 4 GSLSRAGPLPLLRQPP--IMQPPLDLKQILPFPLEPAPTLGLFSNYSTMD---------- 51
Query: 69 FGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSA 128
P +K V+S H G K K ++
Sbjct: 52 ------PVQKAVLS----------------HTFGGP---------LLKTKRPVI------ 74
Query: 129 KANPSCSITPITGNNSDKSED--KG-----KLKASSSSQPSSSESGSFLLKSGTTPLPPG 181
SC+I I N+ ++E KG ++K +++ E G ++ P PPG
Sbjct: 75 ----SCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPG---VREPGDPAPPG 127
Query: 182 AATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARN 241
+ +P+ AP G+KHKT++EAR+
Sbjct: 128 S--TPTNGDGVAP---------------------------------RPGTKHKTILEARS 152
Query: 242 GAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVA 301
G GPIK+YPR G G + Q++TFHCEIC+V VNSE+QLKQHISSRRH+D VA
Sbjct: 153 GLGPIKAYPRLGPPTP---GEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVA 209
Query: 302 GKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAA----AAAVSSALSL 357
GKP P S + K R LA L F K++ K LA L SPLA AAA S LSL
Sbjct: 210 GKP-NPLLSRHKK-SRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSL 267
Query: 358 PPRPSASLFQAPAIPPALLRPGHGPIRATPASILFAPY 395
P P+A L Q P I LL P GPIR ILF+PY
Sbjct: 268 RPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPILFSPY 305
>gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens]
Length = 229
Score = 65.1 bits (157), Expect = 1e-10
Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 31/233 (13%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSK----------DSAKANP 132
C VC + S+SQ AHY+ KHA KV+ + P+K D N
Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNK 75
Query: 133 SCSITPITGNNS--DKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKST 190
C++ ++ ++ S +GK+ A ++ LK+ TPL SP K
Sbjct: 76 CCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTP---LKTTATPL------SPLKPP 126
Query: 191 NGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYP 250
VV S ++ YC LC N+ + H G KHK A +
Sbjct: 127 RMDTAPVVASPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHK------KNAARVALLE 180
Query: 251 RPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGK 303
+ G+ L M + GL+ + + C IC V +NS Q H+ +H+ + K
Sbjct: 181 QLGTTLDM---GELRGLR-RNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 229
Score = 44.7 bits (104), Expect = 1e-04
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 24/154 (15%)
Query: 210 YCSLCKVAVNSLSQLEAHNTGSKHKT------MVEARNGAGPIKSYPRPGSRLKMQNGSK 263
YC +C + S SQ AH KH + M+ R+G P K RL+ +NGS
Sbjct: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAK-------RLRSENGS- 66
Query: 264 GSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV-----AGKPLKPKYSPYN----- 313
+ + +K C +C++ S + H + H R+ PLK +P +
Sbjct: 67 DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLKPP 126
Query: 314 KLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAA 347
++ +P + + D L A+ ++PL A
Sbjct: 127 RMDTAPVVASPYQRRDSDRYCGLCAAWFNNPLMA 160
>gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens]
Length = 289
Score = 61.6 bits (148), Expect = 1e-09
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAK--ANPSCSITPIT 140
C +C + NS QA+AHY+G H KK++ A + P + + A P + P
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQM 131
Query: 141 GNNSD-------KSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGA 193
G+ D KL +S S P+ +++ + K+ L A S S S
Sbjct: 132 GSFKPGGRVILATENDYCKLCDASFSSPAVAQA-HYQGKNHAKRLRLAEAQSNSFS---- 186
Query: 194 PGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARN-------GAGPI 246
ES E L Q A G++ K M RN AGP
Sbjct: 187 -----ESSE------------------LGQRRARKEGNEFKMMPNRRNMYTVQNNSAGP- 222
Query: 247 KSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVA 301
Y P SR ++ + F+C +C+V E++ +QH+ S++HK +V+
Sbjct: 223 --YFNPRSRQRIPRDLAMCVTPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKVS 275
Score = 47.4 bits (111), Expect = 2e-05
Identities = 45/162 (27%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 160 QPSSSESGSFLLKS-GTTPLPPGAATSPSKSTNGA------PGTVVESEEEKAKKLLYCS 212
QPS S S +S GT LPP S A G + E+ K LYC
Sbjct: 14 QPSPSPPMSVATRSTGTLQLPPQKPFGQEASLPLAGEEELSKGGEQDCALEELCKPLYCK 73
Query: 213 LCKVAVNSLSQLEAHNTGSKHKTMVE---ARNGAGP-------IKSYPRPGSRLKMQNGS 262
LC V +NS Q +AH G H + A N P ++ P + Q GS
Sbjct: 74 LCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQMGS 133
Query: 263 KGSG----LQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 300
G L + +C++CD +S + H + H R+
Sbjct: 134 FKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRL 175
>gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens]
Length = 288
Score = 60.8 bits (146), Expect = 2e-09
Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 46/234 (19%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAK--ANPSCSITPIT 140
C +C + NS QA+AHY+G H KK++ A + P + + A P + P
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQM 131
Query: 141 GNNSD-------KSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGA 193
G+ D KL +S S P+ +++ + K+ L A S S S
Sbjct: 132 GSFKPGGRVILATENDYCKLCDASFSSPAVAQA-HYQGKNHAKRLRLAEAQSNSFS---- 186
Query: 194 PGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARN------GAGPIK 247
ES E L Q A G++ K M RN +GP
Sbjct: 187 -----ESSE------------------LGQRRARKEGNEFKMMPNRRNMYTVQNNSGP-- 221
Query: 248 SYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVA 301
Y P SR ++ + F+C +C+V E++ +QH+ S++HK +V+
Sbjct: 222 -YFNPRSRQRIPRDLAMCVTPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKVS 274
Score = 47.4 bits (111), Expect = 2e-05
Identities = 45/162 (27%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 160 QPSSSESGSFLLKS-GTTPLPPGAATSPSKSTNGA------PGTVVESEEEKAKKLLYCS 212
QPS S S +S GT LPP S A G + E+ K LYC
Sbjct: 14 QPSPSPPMSVATRSTGTLQLPPQKPFGQEASLPLAGEEELSKGGEQDCALEELCKPLYCK 73
Query: 213 LCKVAVNSLSQLEAHNTGSKHKTMVE---ARNGAGP-------IKSYPRPGSRLKMQNGS 262
LC V +NS Q +AH G H + A N P ++ P + Q GS
Sbjct: 74 LCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQMGS 133
Query: 263 KGSG----LQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 300
G L + +C++CD +S + H + H R+
Sbjct: 134 FKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRL 175
>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
Length = 1074
Score = 52.8 bits (125), Expect = 5e-07
Identities = 60/267 (22%), Positives = 100/267 (37%), Gaps = 30/267 (11%)
Query: 81 ISCNVCQLRFNSDSQAEAHYKGSKHAKKVK-----ALDATKNKPKMVPSKDSAKA----N 131
+ C +C + AH +G+KH K VK +P +V S+ A
Sbjct: 382 LRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVSQATSSTAVSASK 441
Query: 132 PSCSITPITGNNSD-------KSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAAT 184
P+ S + I NN S KG +SS S+S + K P A
Sbjct: 442 PTASPSSIAANNCTVNTSSVATSSMKGLTTTGNSSLNSTSNT-----KVSAVPTNMAAKK 496
Query: 185 SPSKSTNGAPGTVVESEEEKAKKLLYCSLCK-VAVNSLSQLEAHNTGSKHKTMVEARNGA 243
+ + N G ++S KA+ + K V S Q+ + + + A A
Sbjct: 497 TSTPKINFVGGNKLQSTGNKAEDIKGTECVKSTPVTSAVQIPEVKQDTVSEPVTPASLAA 556
Query: 244 GPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGK 303
P ++ +G ++ FHC++C+ N + H+ RRH+
Sbjct: 557 LQSDVQPVGHDYVEEVRNDEGKVIR---FHCKLCECSFNDPNAKEMHLKGRRHR-----L 608
Query: 304 PLKPKYSPYNKLQRSPSILAAKLAFQK 330
K K +P +++ PSI A K+ +K
Sbjct: 609 QYKKKVNPDLQVEVKPSIRARKIQEEK 635
Score = 40.4 bits (93), Expect = 0.003
Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 20/179 (11%)
Query: 135 SITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAP 194
S T +T + + S + + +++SS + + AA + + T AP
Sbjct: 254 STTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGTTFTKKAP 313
Query: 195 ---GTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPR 251
+ + K ++ YC +CK++ + H G KHK K
Sbjct: 314 FQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK-----------KEAAL 362
Query: 252 PGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV-----AGKPL 305
S+ + S G QN+ CE+CDV HI +H+ V GKP+
Sbjct: 363 KASQNTSSSNSSTRGTQNQ-LRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPI 420
>gi|6912440 zinc finger protein 346 [Homo sapiens]
Length = 294
Score = 51.2 bits (121), Expect = 2e-06
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 38/190 (20%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVK------ALDATKNKPKMVPS-------KDSAK 129
C VC S+SQ AHY+ KHA KVK ++ K + K + S KD +
Sbjct: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
Query: 130 ANPSCSIT---PITGNNS--DKSEDKG-KLKASSSSQPSSSESGSFLLKSGTTPLPPGAA 183
P C++T P+ + K+ K KLK S+ + ++ + L
Sbjct: 135 CCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATF 194
Query: 184 TSPSKSTNGAPGTVVESEEEKAKKLLY-------------------CSLCKVAVNSLSQL 224
P + G +E K K + C CK+ +NS+ Q
Sbjct: 195 NDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCKIVLNSIEQY 254
Query: 225 EAHNTGSKHK 234
+AH +G KHK
Sbjct: 255 QAHVSGFKHK 264
Score = 35.0 bits (79), Expect = 0.12
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 211 CSLCKVAVNSLSQLEAHNTGSKHKTMVE---ARNGAGPIKSYPRPGSRLKMQNGSKGSGL 267
C +C + S SQ AH KH V+ A +G +K G K+ + K S
Sbjct: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLK-----GETKKLDSDQKSSRS 129
Query: 268 QNKTFHCEICDVHVNSEIQLKQHISSRRH 296
++K C IC++ +S + + H + H
Sbjct: 130 KDKNQCCPICNMTFSSPVVAQSHYLGKTH 158
>gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens]
Length = 153
Score = 48.1 bits (113), Expect = 1e-05
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 142
C VC + S+SQ AHY+ KHA KV+ + P+K N S +
Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGS------DAD 69
Query: 143 NSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEE 202
DK++ S +S + + + L G T P K+T
Sbjct: 70 MVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKT-PLKTTG----------- 117
Query: 203 EKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKT 235
++ C++C V++NS+ Q AH GSKH+T
Sbjct: 118 --LRRNYRCTICSVSLNSIEQYHAHLKGSKHQT 148
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 210 YCSLCKVAVNSLSQLEAHNTGSKHKT------MVEARNGAGPIKSYPRPGSRLKMQNGSK 263
YC +C + S SQ AH KH + M+ R+G P K RL+ +NGS
Sbjct: 15 YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAK-------RLRSENGS- 66
Query: 264 GSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 300
+ + +K C +C++ S + H + H R+
Sbjct: 67 DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRL 103
Score = 36.6 bits (83), Expect = 0.041
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 31/131 (23%)
Query: 177 PLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM 236
P G +S NG+ +V+ + C+LC ++ S ++H G H
Sbjct: 50 PRDGGCPAKRLRSENGSDADMVDKNK-------CCTLCNMSFTSAVVADSHYQGKIH--- 99
Query: 237 VEARNGAGPIKSYPRPGSRLKMQNGSKG----SGLQNKTFHCEICDVHVNSEIQLKQHIS 292
RLK+ G K +GL+ + + C IC V +NS Q H+
Sbjct: 100 ----------------AKRLKLLLGEKTPLKTTGLR-RNYRCTICSVSLNSIEQYHAHLK 142
Query: 293 SRRHKDRVAGK 303
+H+ + K
Sbjct: 143 GSKHQTNLKNK 153
Score = 33.1 bits (74), Expect = 0.45
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVK 110
C +C + NS Q AH KGSKH +K
Sbjct: 124 CTICSVSLNSIEQYHAHLKGSKHQTNLK 151
>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
Length = 638
Score = 45.8 bits (107), Expect = 7e-05
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 9/152 (5%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 142
C VC + +SQ +HY+G KHA+ V + VP K + + G
Sbjct: 58 CQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGV 117
Query: 143 NSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEE 202
+ +K D + SS S G K + SPS + E
Sbjct: 118 DKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPSG---------FQPEM 168
Query: 203 EKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 234
+ + C +C +A SL +H GS+H+
Sbjct: 169 AFSMRTYVCHICSIAFTSLDMFRSHMQGSEHQ 200
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 180 PGAATSPSKSTNGAPGT-VVESEEEKAKKLL--YCSLCKVAVNSLSQLEAHNTGSKHKTM 236
PG++ SP+ ++ A T + +E+EKA+ +C +C V + SQ +H G KH
Sbjct: 24 PGSSDSPASASQIAGTTDAIWNEQEKAELFTDKFCQVCGVMLQFESQRISHYEGEKH--- 80
Query: 237 VEARNGAGPIKSYPR----PGSRLKMQ----NGSKGSGLQNKTFHCEICDVHVNSEIQLK 288
A+N + + + PG ++KM + G+ F C++C++ +S + +
Sbjct: 81 --AQNVSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGVDKNKF-CDLCNMMFSSPLIAQ 137
Query: 289 QHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAF 328
H + H K LK ++ Q SPS ++AF
Sbjct: 138 SHYVGKVH-----AKKLKQLMEEHD--QASPSGFQPEMAF 170
Score = 30.8 bits (68), Expect = 2.2
Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 17/99 (17%)
Query: 203 EKAKKLLYCSLCKVAVNSLSQLEAHNTGSKH----KTMVEARNGAGPIKSYPRPGSRLKM 258
E K +C LC + +S ++H G H K ++E + A P P ++
Sbjct: 115 EGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPSGFQPEMAFSMR- 173
Query: 259 QNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHK 297
T+ C IC + S + H+ H+
Sbjct: 174 ------------TYVCHICSIAFTSLDMFRSHMQGSEHQ 200
>gi|4507127 small nuclear ribonucleoprotein polypeptide C [Homo
sapiens]
Length = 159
Score = 43.9 bits (102), Expect = 3e-04
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 272 FHCEICDVHV--NSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQ 329
F+C+ CD ++ +S K H S R+HK+ V K Y + + Q I AFQ
Sbjct: 4 FYCDYCDTYLTHDSPSVRKTHCSGRKHKENV-----KDYYQKWMEEQAQSLIDKTTAAFQ 58
Query: 330 KDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGP 382
+ + P S+P A A + SLP P + AP + + P GP
Sbjct: 59 QGKIPPTP---FSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGGPPMMPMMGP 108
>gi|169167975 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 272 FHCEICDVHV--NSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQ 329
F+C+ C+ ++ +S K H S R+HK+ V K Y + K Q I AFQ
Sbjct: 4 FYCDYCNTYLTHDSPPVRKTHCSGRKHKENV-----KDYYQKWMKEQAQSLIDKTTAAFQ 58
Query: 330 KDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGP 382
+ + PA S+P A + SLP P + AP + + P GP
Sbjct: 59 QGK---IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGP 108
>gi|169167690 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 272 FHCEICDVHV--NSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQ 329
F+C+ C+ ++ +S K H S R+HK+ V K Y + K Q I AFQ
Sbjct: 4 FYCDYCNTYLTHDSPPVRKTHCSGRKHKENV-----KDYYQKWMKEQAQSLIDKTTAAFQ 58
Query: 330 KDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGP 382
+ + PA S+P A + SLP P + AP + + P GP
Sbjct: 59 QGK---IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPAMMPMMGP 108
>gi|153266778 arg tyrosine kinase isoform c [Homo sapiens]
Length = 1167
Score = 43.1 bits (100), Expect = 4e-04
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 59 PVQKAVINHTFGVSIPPKKK------QVISCNVCQLRFNSDSQAEAHYKGSK-HAKKVKA 111
PV NH V I P K Q+I + +F S+ + G K ++VK
Sbjct: 906 PVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNKFKLLSEHQVTSSGDKDRPRRVKP 965
Query: 112 LDATKNKPKM-VPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFL 170
A P M + S ++P+ T +T S +G KA+ + P S ++G +
Sbjct: 966 KCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQSTSETQEGGKKAALGAVPISGKAGRPV 1025
Query: 171 LKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEK--AKKLLYCSLCKVAVNSLSQL 224
+ PLP ++ SP+K NG GT V + K A+K+ + K A+ + L
Sbjct: 1026 MPPPQVPLPT-SSISPAKMANGTAGTKVALRKTKQAAEKISADKISKEALLECADL 1080
>gi|6382062 arg tyrosine kinase isoform b [Homo sapiens]
Length = 1182
Score = 43.1 bits (100), Expect = 4e-04
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 59 PVQKAVINHTFGVSIPPKKK------QVISCNVCQLRFNSDSQAEAHYKGSK-HAKKVKA 111
PV NH V I P K Q+I + +F S+ + G K ++VK
Sbjct: 921 PVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNKFKLLSEHQVTSSGDKDRPRRVKP 980
Query: 112 LDATKNKPKM-VPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFL 170
A P M + S ++P+ T +T S +G KA+ + P S ++G +
Sbjct: 981 KCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQSTSETQEGGKKAALGAVPISGKAGRPV 1040
Query: 171 LKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEK--AKKLLYCSLCKVAVNSLSQL 224
+ PLP ++ SP+K NG GT V + K A+K+ + K A+ + L
Sbjct: 1041 MPPPQVPLPT-SSISPAKMANGTAGTKVALRKTKQAAEKISADKISKEALLECADL 1095
>gi|209862772 arg tyrosine kinase isoform d [Homo sapiens]
Length = 1064
Score = 43.1 bits (100), Expect = 4e-04
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 59 PVQKAVINHTFGVSIPPKKK------QVISCNVCQLRFNSDSQAEAHYKGSK-HAKKVKA 111
PV NH V I P K Q+I + +F S+ + G K ++VK
Sbjct: 803 PVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNKFKLLSEHQVTSSGDKDRPRRVKP 862
Query: 112 LDATKNKPKM-VPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFL 170
A P M + S ++P+ T +T S +G KA+ + P S ++G +
Sbjct: 863 KCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQSTSETQEGGKKAALGAVPISGKAGRPV 922
Query: 171 LKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEK--AKKLLYCSLCKVAVNSLSQL 224
+ PLP ++ SP+K NG GT V + K A+K+ + K A+ + L
Sbjct: 923 MPPPQVPLPT-SSISPAKMANGTAGTKVALRKTKQAAEKISADKISKEALLECADL 977
>gi|153266757 arg tyrosine kinase isoform a [Homo sapiens]
Length = 1146
Score = 43.1 bits (100), Expect = 4e-04
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 59 PVQKAVINHTFGVSIPPKKK------QVISCNVCQLRFNSDSQAEAHYKGSK-HAKKVKA 111
PV NH V I P K Q+I + +F S+ + G K ++VK
Sbjct: 885 PVLPTTHNHKVPVLISPTLKHTPADVQLIGTDSQGNKFKLLSEHQVTSSGDKDRPRRVKP 944
Query: 112 LDATKNKPKM-VPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFL 170
A P M + S ++P+ T +T S +G KA+ + P S ++G +
Sbjct: 945 KCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQSTSETQEGGKKAALGAVPISGKAGRPV 1004
Query: 171 LKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEK--AKKLLYCSLCKVAVNSLSQL 224
+ PLP ++ SP+K NG GT V + K A+K+ + K A+ + L
Sbjct: 1005 MPPPQVPLPT-SSISPAKMANGTAGTKVALRKTKQAAEKISADKISKEALLECADL 1059
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 43.1 bits (100), Expect = 4e-04
Identities = 69/281 (24%), Positives = 101/281 (35%), Gaps = 39/281 (13%)
Query: 123 PSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGA 182
P++ SA A PS + P + + + S+S P + GS L G P P
Sbjct: 305 PAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAPGSLL---GAAPGLP-- 359
Query: 183 ATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNG 242
SP A G + + L+ + A++ LS L H G V
Sbjct: 360 --SPLLPQTSASGVIFPNP------LVSIAATANALDPLSALMKHRKGKPPNVSVFE--- 408
Query: 243 AGPIKSYPRPGSRLKMQNGSK----GSGLQ--------NKTFHCEICDVHVNSEIQLKQH 290
P S P + K + +K S LQ + F C IC +++ LK H
Sbjct: 409 --PKASAEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVH 466
Query: 291 ISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAA 350
+RHK++ + P Y L P+ KP+ S P+
Sbjct: 467 F--QRHKEKYPHIQMNP-YPVPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPVLPTVP 523
Query: 351 VSSALSLPPR-PSASLF-QAPAIPPALLRPGHGPIRATPAS 389
S L LPP P A + +P+ PA P R +PAS
Sbjct: 524 TSVGLQLPPTVPGAHGYADSPSATPA----SRSPQRPSPAS 560
Score = 38.1 bits (87), Expect = 0.014
Identities = 69/269 (25%), Positives = 97/269 (36%), Gaps = 37/269 (13%)
Query: 123 PSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLK-SGTT--PLP 179
P +D + +P+ S P S+ +E+ G A ++P E+ + +G T P P
Sbjct: 90 PPEDFPEPSPASS--PSERAESEAAEEAGAEGAEGEARPVEKEAEPMDAEPAGDTRAPRP 147
Query: 180 PGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEA 239
P AA +P GAP T V E + KVAV SQ G++ A
Sbjct: 148 PPAAPAPPTPAYGAPSTNVTLEALLS--------TKVAVAQFSQ------GAR------A 187
Query: 240 RNGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDR 299
G+G L ++ + LQ + H + S++ L Q R
Sbjct: 188 AGGSGAGGGVAAAAVPLILE---QLMALQQQQIHQLQLIEQIRSQVALMQRPPPR----- 239
Query: 300 VAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPP 359
L P +P + +PS L A P A S P A AA + P
Sbjct: 240 ---PSLSPAAAP-SAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRP 295
Query: 360 RPSASLFQAPAIPPALLRPGHGPIRATPA 388
AS PA P A P P A PA
Sbjct: 296 ESGASTPGGPAEPSAPAAPSAAPAPAAPA 324
Score = 33.1 bits (74), Expect = 0.45
Identities = 63/293 (21%), Positives = 107/293 (36%), Gaps = 38/293 (12%)
Query: 109 VKALDATKNKPKMVPSKDSAKANPSCSITPITGNNSDK-----SEDKGKLKASSSSQPSS 163
+ ++ A +N+ KM+ S S + SD+ S G L++ S+ P+
Sbjct: 837 ISSIAALENQMKMIDSVMSCQQLTGLKSVENGSGESDRLSNDSSSAVGDLESRSAGSPAL 896
Query: 164 SESGSFLLKSGTTPLPPGAATSPSKSTN-GAPGTVVESEEEKAKKLLYCSLCKVAVNSLS 222
SES S +P P + SKS GAP EE + L A S
Sbjct: 897 SESSS---SQALSPAPSNGESFRSKSPGLGAP------EEPQEIPLKTERPDSPAAAPGS 947
Query: 223 QLEAHNTGSKHKT-----MVEARNGAGPIKSYPRPGSRLKMQNGSK---GSGLQNKTFHC 274
G K + + G P G ++ + S + + F C
Sbjct: 948 GGAPGRAGIKEEAPFSLLFLSRERGKCPSTVCGVCGKPFACKSALEIHYRSHTKERPFVC 1007
Query: 275 EICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMK 334
+C ++ LKQH+ + R K+ + + P ++ Q +PS++++
Sbjct: 1008 ALCRRGCSTMGNLKQHLLTHRLKE-LPSQLFDPNFA-LGPSQSTPSLISS---------- 1055
Query: 335 PLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGPIRATP 387
AP + + + PP P+ Q PA P ++ PG P+ A P
Sbjct: 1056 -AAPTMIKMEVNGHGKAMALGEGPPLPAG--VQVPAGPQTVMGPGLAPMLAPP 1105
>gi|169168212 PREDICTED: hypothetical protein LOC100129566 [Homo
sapiens]
Length = 155
Score = 42.7 bits (99), Expect = 6e-04
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 272 FHCEICDVHV--NSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQ 329
F+C+ C+ ++ +S K H S R+HK+ V K Y + K Q I AFQ
Sbjct: 4 FYCDYCNTYLTHDSPPVRKTHCSGRKHKENV-----KDYYQKWMKEQAQSLIDKTTAAFQ 58
Query: 330 KDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGP 382
+ + PA S+P A + SLP P + AP + + P GP
Sbjct: 59 QGK---IPPAPFSAPPPVGAMIPPPPSLPGPPHPGMMPAPHMRGPPMMPMMGP 108
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 42.0 bits (97), Expect = 0.001
Identities = 52/203 (25%), Positives = 78/203 (38%), Gaps = 33/203 (16%)
Query: 177 PLPPGAATSP-SKSTNGAPGTVVESEE-EKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 234
P P G+ +SP + S P + + + +L YC +CK++ H G KH+
Sbjct: 237 PAPAGSGSSPRADSKPPLPSKLPRPKAGPRQLQLHYCDICKISCAGPQTYREHLGGQKHR 296
Query: 235 TMVEA-RNGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISS 293
A + G P NGS G+Q + HC++C V HI
Sbjct: 297 KKEAAQKTGVQP--------------NGSP-RGVQAQ-LHCDLCAVSCTGADAYAAHIRG 340
Query: 294 RRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSS 353
+H + + + KL + L LA + P A A +SP + SS
Sbjct: 341 SKH---------QKVFKLHAKLGKPIPTLEPALATES---PPGAEAKPTSPTGPSVCASS 388
Query: 354 ALSLPPRPSAS--LFQAPAIPPA 374
+L RP AS L + P P A
Sbjct: 389 RPALAKRPVASKALCEGPPEPQA 411
Score = 38.9 bits (89), Expect = 0.008
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 24/198 (12%)
Query: 81 ISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKP-------KMVPSKDSAKANPS 133
+ C++C + AH +GSKH K K L A KP S A+A P+
Sbjct: 319 LHCDLCAVSCTGADAYAAHIRGSKHQKVFK-LHAKLGKPIPTLEPALATESPPGAEAKPT 377
Query: 134 CSITPITGNNSDKSEDKGKLKA-----------SSSSQPSSSESGSFLLKSGTTPLPPGA 182
P +S + K + + ++ +P + L+ P G+
Sbjct: 378 SPTGPSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQGGS 437
Query: 183 ATSPSKSTNG---APGTVVESEEEKAKKL-LYCSLCKVAVNSLSQLEAHNTGSKHKTMVE 238
+P+ ++ P V E ++ + L +C LC+ + N L+ + H G +H+
Sbjct: 438 KEAPAGCSDAQPVGPEYVEEVFSDEGRVLRFHCKLCECSFNDLNAKDLHVRGRRHRLQYR 497
Query: 239 AR-NGAGPIKSYPRPGSR 255
+ N PI + P +R
Sbjct: 498 KKVNPDLPIATEPSSRAR 515
Score = 37.7 bits (86), Expect = 0.018
Identities = 55/264 (20%), Positives = 95/264 (35%), Gaps = 23/264 (8%)
Query: 75 PKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSC 134
P++ Q+ C++C++ H G KH KK +A T +P P A+ +
Sbjct: 265 PRQLQLHYCDICKISCAGPQTYREHLGGQKHRKK-EAAQKTGVQPNGSPRGVQAQLHCDL 323
Query: 135 SITPITGNNSDKSEDKG-KLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGA 193
TG ++ + +G K + + L + T PPGA P+ T
Sbjct: 324 CAVSCTGADAYAAHIRGSKHQKVFKLHAKLGKPIPTLEPALATESPPGAEAKPTSPT--G 381
Query: 194 PGTVVESEEEKAKK-LLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNG---------- 242
P S AK+ + +LC+ + G + +E
Sbjct: 382 PSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQGGSKEAP 441
Query: 243 AGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAG 302
AG + P ++ +G L+ FHC++C+ N H+ RRH+
Sbjct: 442 AGCSDAQPVGPEYVEEVFSDEGRVLR---FHCKLCECSFNDLNAKDLHVRGRRHR----- 493
Query: 303 KPLKPKYSPYNKLQRSPSILAAKL 326
+ K +P + PS A K+
Sbjct: 494 LQYRKKVNPDLPIATEPSSRARKV 517
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 211 CSLCKVAVNSLSQLEAHNTGSKHKTMVE-ARNGAGPI---KSYPRPGSRLK-MQNGSKGS 265
C +C + + L H KH V+ +NG G S P P + L S
Sbjct: 701 CEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPAPNTSLSGCGTPSPSK 760
Query: 266 GLQNKTFHCEICDVHVNSEIQLKQHISSRRH 296
Q T+ CE+CD N L+ H++S +H
Sbjct: 761 PKQKPTWRCEVCDYETNVARNLRIHMTSEKH 791
Score = 38.1 bits (87), Expect = 0.014
Identities = 45/217 (20%), Positives = 75/217 (34%), Gaps = 49/217 (22%)
Query: 113 DATKNKPKMVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLK 172
D T+ K + + S + I+ ++ S+D S +S + +
Sbjct: 531 DDTEKKKQTAAVRASGSVASNYGISGKDFADASASKDSATAAHPSEIARGDEDSSATPHQ 590
Query: 173 SGTTPLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSK 232
G TP PG +P +G+PG+ +E C C + S L H
Sbjct: 591 HGFTPSTPG---TPGPGGDGSPGSGIE-----------CPKCDTVLGSSRSLGGH----- 631
Query: 233 HKTMVEARNGAGPIK--------------------SYPRPG-SRLKMQNGSKGSGLQN-- 269
TM+ +RN +K +P PG S + + G L
Sbjct: 632 -MTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKTGQPHPRLARGE 690
Query: 270 ------KTFHCEICDVHVNSEIQLKQHISSRRHKDRV 300
K F CE+C+ ++ L H+ S +H + V
Sbjct: 691 SYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNV 727
Score = 37.7 bits (86), Expect = 0.018
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 209 LYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKMQNGSKGSGLQ 268
L C+ C NS+ +L H T +H+ +K Y L+ Q G+ +
Sbjct: 973 LKCNACDYYTNSVDKLRLHTTNHRHEAA---------LKLY----KHLQKQEGAVNP--E 1017
Query: 269 NKTFHCEICDVHVNSEIQLKQHISSRRHK 297
+ ++C +CD ++ L QH+ S +H+
Sbjct: 1018 SCYYYCAVCDYTTKVKLNLVQHVRSVKHQ 1046
Score = 37.0 bits (84), Expect = 0.031
Identities = 65/339 (19%), Positives = 113/339 (33%), Gaps = 65/339 (19%)
Query: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 142
CN+CQ F + + H + P A+ + P+ G
Sbjct: 1382 CNLCQRSFRTFQALKKHLEAGH------------------PELSEAELQQLYASLPVNGE 1423
Query: 143 NSDKSE-----DKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTV 197
+SE D G + E + + S ++ +P + P ++ G
Sbjct: 1424 LWAESETMSQDDHGLEQEMEREYEVDHEGKASPVGSDSSSIPDDMGSEPKRTLPFRKGPN 1483
Query: 198 VESEEEKAKKLLY-CSLCKVAVNSLSQLEAH--NTGSKHKTMVEARNGAGPIKSYPRPGS 254
E+ Y C++CK + + L H + HK + + P+
Sbjct: 1484 FTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVPQ------ 1537
Query: 255 RLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPK------ 308
S NK + C IC+V + L+ H+ S H+ + L+P
Sbjct: 1538 -------ETNSNTDNKPYKCSICNVAYSQSSTLEIHMRSVLHQTKARAAKLEPSGHVAGG 1590
Query: 309 -------YSPYNKLQRSPSILAAKL----AFQKDMMKPLAPAFLSS-----PLAAAAAVS 352
SP + S S+ A K++ K P +S+ P + A +
Sbjct: 1591 HSIAANVNSPGQGMLDSMSLAAVNSKDTHLDAKELNKKQTPDLISAQPAHHPPQSPAQIQ 1650
Query: 353 SALSLPPRPSASLFQAPAIPPALLRPGHGPIRATPASIL 391
L + A+ FQ + PA L H P+ TP ++L
Sbjct: 1651 MQLQHELQQQAAFFQPQFLNPAFL--PHFPM--TPEALL 1685
Score = 32.3 bits (72), Expect = 0.76
Identities = 58/302 (19%), Positives = 112/302 (37%), Gaps = 22/302 (7%)
Query: 92 SDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGNNSDKSEDKG 151
S + + K + K+ K LD T KP P+ + S+T + + +DK D
Sbjct: 2780 STTGSSGDVKPALSPKEPKTLD-TLPKPATTPTTEVCDDKFLFSLTSPSIHFNDKDGDHD 2838
Query: 152 K-LKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPG-----TVVESEEEKA 205
+ + ++ S + + ++P P G++ +N PG T + + + K
Sbjct: 2839 QSFYITDDPDDNADRSETSSIADPSSPNPFGSSNPFKSKSNDRPGHKRFRTQMSNLQLKV 2898
Query: 206 KKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYP-RPGSRLKMQNGSKG 264
K + + L K V +N K + G + G
Sbjct: 2899 LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKINIGKPFMINQG--- 2955
Query: 265 SGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAA 324
G + C +C V ++ + ++ HI S++H +V + K +P+ +
Sbjct: 2956 -GTEGTKPECTLCGVKYSARLSIRDHIFSKQHISKV--RETVGSQLDREKDYLAPTTVRQ 3012
Query: 325 KLAFQK-DMMKPLAPAF---LSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGH 380
+A Q+ D +K + + P ++ +SLP + P +PP LL +
Sbjct: 3013 LMAQQELDRIKKASDVLGLTVQQPGMMDSSSLHGISLP----TAYPGLPGLPPVLLPGMN 3068
Query: 381 GP 382
GP
Sbjct: 3069 GP 3070
Score = 28.9 bits (63), Expect = 8.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 272 FHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLK 306
+ C CDV ++ L QH+ S HK++ + ++
Sbjct: 3402 YQCLACDVAISGNEALSQHLQSSLHKEKTIKQAMR 3436
>gi|189217876 sal-like 1 isoform b [Homo sapiens]
Length = 1227
Score = 40.8 bits (94), Expect = 0.002
Identities = 53/243 (21%), Positives = 88/243 (36%), Gaps = 15/243 (6%)
Query: 121 MVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSF----LLKSGTT 176
++PS + N + +T +S+K S+ SSS S +F LL +
Sbjct: 233 IIPSNSGSSPNMNILAAAVTTPSSEKVASSAGASHVSNPAVSSSSSPAFAISSLLSPASN 292
Query: 177 PLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM 236
PL P A++ S + P +E+ + L K +++ EA +T +
Sbjct: 293 PLLPQQASANSVFPSPLPNIGTTAEDLNSLSAL-AQQRKSKPPNVTAFEAKSTSDEAFFK 351
Query: 237 VEARNGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRH 296
+ R A S L+ G + F C IC +++ LK H +RH
Sbjct: 352 HKCRFCAKVFGSDSALQIHLRSHTG-------ERPFKCNICGNRFSTKGNLKVHF--QRH 402
Query: 297 KDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALS 356
K++ + P Y L P+ KP+ + P+ S L
Sbjct: 403 KEKYPHIQMNP-YPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLP 461
Query: 357 LPP 359
LPP
Sbjct: 462 LPP 464
>gi|118442837 sal-like 1 isoform a [Homo sapiens]
Length = 1324
Score = 40.8 bits (94), Expect = 0.002
Identities = 53/243 (21%), Positives = 88/243 (36%), Gaps = 15/243 (6%)
Query: 121 MVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSF----LLKSGTT 176
++PS + N + +T +S+K S+ SSS S +F LL +
Sbjct: 330 IIPSNSGSSPNMNILAAAVTTPSSEKVASSAGASHVSNPAVSSSSSPAFAISSLLSPASN 389
Query: 177 PLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM 236
PL P A++ S + P +E+ + L K +++ EA +T +
Sbjct: 390 PLLPQQASANSVFPSPLPNIGTTAEDLNSLSAL-AQQRKSKPPNVTAFEAKSTSDEAFFK 448
Query: 237 VEARNGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRH 296
+ R A S L+ G + F C IC +++ LK H +RH
Sbjct: 449 HKCRFCAKVFGSDSALQIHLRSHTG-------ERPFKCNICGNRFSTKGNLKVHF--QRH 499
Query: 297 KDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALS 356
K++ + P Y L P+ KP+ + P+ S L
Sbjct: 500 KEKYPHIQMNP-YPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDTKPVLPTLTTSVGLP 558
Query: 357 LPP 359
LPP
Sbjct: 559 LPP 561
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.126 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,519,167
Number of Sequences: 37866
Number of extensions: 883661
Number of successful extensions: 6579
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 338
Number of HSP's that attempted gapping in prelim test: 5328
Number of HSP's gapped (non-prelim): 1288
length of query: 395
length of database: 18,247,518
effective HSP length: 104
effective length of query: 291
effective length of database: 14,309,454
effective search space: 4164051114
effective search space used: 4164051114
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.