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Search of human proteins with 16445031
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16445031 StAR-related lipid transfer (START) domain
containing 13 isoform gamma [Homo sapiens]
(995 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41281907 StAR-related lipid transfer (START) domain containin... 2024 0.0
gi|16445031 StAR-related lipid transfer (START) domain containin... 2024 0.0
gi|41281898 StAR-related lipid transfer (START) domain containin... 2024 0.0
gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens] 999 0.0
gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens] 999 0.0
gi|215820652 StAR-related lipid transfer (START) domain containi... 683 0.0
gi|215820650 StAR-related lipid transfer (START) domain containi... 683 0.0
gi|31543659 StAR-related lipid transfer (START) domain containin... 683 0.0
gi|39932589 Rho GTPase activating protein 18 [Homo sapiens] 103 8e-22
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom... 92 3e-18
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom... 92 3e-18
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H... 92 3e-18
gi|156071465 Rho GTPase activating protein 4 [Homo sapiens] 84 5e-16
gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens] 84 5e-16
gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo sapi... 84 5e-16
gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapi... 84 5e-16
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ... 82 2e-15
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 82 2e-15
gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a ... 80 7e-15
gi|59710113 Rho GTPase activating protein 28 isoform a [Homo sap... 80 1e-14
gi|59710111 Rho GTPase activating protein 28 isoform b [Homo sap... 80 1e-14
gi|5803145 ralA binding protein 1 [Homo sapiens] 78 4e-14
gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b ... 78 5e-14
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 77 6e-14
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 77 6e-14
gi|156119615 myosin IXA [Homo sapiens] 75 2e-13
gi|54860079 nadrin isoform 1 [Homo sapiens] 75 3e-13
gi|54860105 nadrin isoform 2 [Homo sapiens] 75 3e-13
gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo sapi... 74 9e-13
gi|188497642 ARHGAP15 [Homo sapiens] 74 9e-13
>gi|41281907 StAR-related lipid transfer (START) domain containing 13
isoform beta [Homo sapiens]
Length = 1105
Score = 2024 bits (5244), Expect = 0.0
Identities = 995/995 (100%), Positives = 995/995 (100%)
Query: 1 MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR 60
MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR
Sbjct: 111 MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR 170
Query: 61 NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD 120
NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD
Sbjct: 171 NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD 230
Query: 121 VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF 180
VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF
Sbjct: 231 VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF 290
Query: 181 KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK 240
KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK
Sbjct: 291 KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK 350
Query: 241 RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT 300
RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT
Sbjct: 351 RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT 410
Query: 301 DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE 360
DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE
Sbjct: 411 DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE 470
Query: 361 KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG 420
KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG
Sbjct: 471 KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG 530
Query: 421 NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP 480
NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP
Sbjct: 531 NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP 590
Query: 481 APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK 540
APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK
Sbjct: 591 APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK 650
Query: 541 AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP 600
AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP
Sbjct: 651 AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP 710
Query: 601 ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL 660
ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL
Sbjct: 711 ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL 770
Query: 661 ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA 720
ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA
Sbjct: 771 ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA 830
Query: 721 TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ 780
TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ
Sbjct: 831 TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ 890
Query: 781 LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE 840
LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE
Sbjct: 891 LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE 950
Query: 841 VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW 900
VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW
Sbjct: 951 VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW 1010
Query: 901 KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS 960
KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS
Sbjct: 1011 KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS 1070
Query: 961 PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI 995
PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI
Sbjct: 1071 PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI 1105
>gi|16445031 StAR-related lipid transfer (START) domain containing
13 isoform gamma [Homo sapiens]
Length = 995
Score = 2024 bits (5244), Expect = 0.0
Identities = 995/995 (100%), Positives = 995/995 (100%)
Query: 1 MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR 60
MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR
Sbjct: 1 MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR 60
Query: 61 NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD 120
NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD
Sbjct: 61 NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD 120
Query: 121 VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF 180
VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF
Sbjct: 121 VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF 180
Query: 181 KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK 240
KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK
Sbjct: 181 KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK 240
Query: 241 RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT 300
RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT
Sbjct: 241 RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT 300
Query: 301 DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE 360
DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE
Sbjct: 301 DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE 360
Query: 361 KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG 420
KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG
Sbjct: 361 KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG 420
Query: 421 NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP 480
NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP
Sbjct: 421 NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP 480
Query: 481 APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK 540
APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK
Sbjct: 481 APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK 540
Query: 541 AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP 600
AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP
Sbjct: 541 AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP 600
Query: 601 ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL 660
ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL
Sbjct: 601 ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL 660
Query: 661 ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA 720
ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA
Sbjct: 661 ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA 720
Query: 721 TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ 780
TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ
Sbjct: 721 TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ 780
Query: 781 LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE 840
LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE
Sbjct: 781 LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE 840
Query: 841 VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW 900
VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW
Sbjct: 841 VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW 900
Query: 901 KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS 960
KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS
Sbjct: 901 KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS 960
Query: 961 PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI 995
PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI
Sbjct: 961 PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI 995
>gi|41281898 StAR-related lipid transfer (START) domain containing 13
isoform alpha [Homo sapiens]
Length = 1113
Score = 2024 bits (5244), Expect = 0.0
Identities = 995/995 (100%), Positives = 995/995 (100%)
Query: 1 MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR 60
MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR
Sbjct: 119 MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMR 178
Query: 61 NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD 120
NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD
Sbjct: 179 NTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRD 238
Query: 121 VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF 180
VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF
Sbjct: 239 VLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESF 298
Query: 181 KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK 240
KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK
Sbjct: 299 KAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK 358
Query: 241 RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT 300
RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT
Sbjct: 359 RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPT 418
Query: 301 DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE 360
DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE
Sbjct: 419 DSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLE 478
Query: 361 KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG 420
KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG
Sbjct: 479 KDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG 538
Query: 421 NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP 480
NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP
Sbjct: 539 NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRP 598
Query: 481 APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK 540
APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK
Sbjct: 599 APASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDK 658
Query: 541 AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP 600
AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP
Sbjct: 659 AVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFP 718
Query: 601 ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL 660
ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL
Sbjct: 719 ENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL 778
Query: 661 ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA 720
ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA
Sbjct: 779 ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYA 838
Query: 721 TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ 780
TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ
Sbjct: 839 TGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQ 898
Query: 781 LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE 840
LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE
Sbjct: 899 LEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE 958
Query: 841 VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW 900
VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW
Sbjct: 959 VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTW 1018
Query: 901 KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS 960
KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS
Sbjct: 1019 KTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS 1078
Query: 961 PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI 995
PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI
Sbjct: 1079 PEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI 1113
>gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens]
Length = 1528
Score = 999 bits (2583), Expect = 0.0
Identities = 558/1031 (54%), Positives = 721/1031 (69%), Gaps = 53/1031 (5%)
Query: 1 MKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDR-NGSPGGTG 58
MKL+++ RK+ DDSDE++ C IS KWTFQR S+RWSR+++ P+ D GSP +
Sbjct: 512 MKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGSPDDSH 571
Query: 59 MRNTTSSESVLTDLSE-PEVCSIHSESSGGS-DSRSQPGQ-------------CCTDNPV 103
++ S L DLSE EV S+ S SS GS S + P + C + N
Sbjct: 572 PKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCSSSNLA 631
Query: 104 MLDAPLVSSSLPQPPRDVLNHPFHPK-NEKPTRARAKSFLKRMETLRGKGAH-GRHKGSG 161
D SLP P +++ + F K +EK +++ +S LKRME+L+ K +H +HK
Sbjct: 632 GNDDSF--GSLPSP-KELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSKHKAPS 688
Query: 162 RTGGLVISGPMLQQ--EPESFKAMQCIQIP--NGDLQNSPPPACRKGLPCSGKSSGESSP 217
+ G L+ISGP+LQ+ + E K + C++I NG+ N P ++ + S ++S SS
Sbjct: 689 KLG-LIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVR-KRSVSNSTQTSSSSSQ 746
Query: 218 SEHSSSGVSTPC--LKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENL 275
SE +SS VSTP + R NKR GMYLE D + + +Q+ + E+
Sbjct: 747 SE-TSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDT 805
Query: 276 VVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRTGS------ISLGREQVPGAREP--R 327
V +IP+DHKPGTFPKAL+ S SP+ ++ VNWRTGS ISL RE + + R
Sbjct: 806 VFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKR 865
Query: 328 LMASCHRASRVSIYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSK 387
+S +SR+SIYDNVPGS LY+S+GDL DLE +D+FP LDDIL HV G+Q +V+ WS+
Sbjct: 866 RNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSE 925
Query: 388 DVLPELQTHDTLVGEPGLSTFPS-PNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPP 446
E + L +S PS P QI LD V RTTPSD++ SLNE E P
Sbjct: 926 KFSDEGDSDSAL---DSVSPCPSSPKQIHLD-----VDNDRTTPSDLDSTGNSLNEPEEP 977
Query: 447 G-VRDRRDSGVGASLTRPNR-RLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLL 504
+ +RRDSGVGASLTR NR RLRW+SFQ SH+P S I+ Q+ +Q++LLQ++SLL
Sbjct: 978 SEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQKYSLL 1037
Query: 505 RLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQ 564
+LTA++EK++ SNKHG++W+VPKFMKR+KVPDYKD++VFGVPL V+VQRTGQPLPQSIQQ
Sbjct: 1038 KLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQ 1097
Query: 565 ALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDL 624
A+RYLR++CLDQVGLFRKSGVKSRI ALRQMNE + VNYE QSAYDVADM+KQ+FRDL
Sbjct: 1098 AMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDL 1157
Query: 625 PEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEE 684
PEPL TNKLSETFL IYQYV K+QRLQA++AAI+LL DENREVLQTLL FL+DV V+E
Sbjct: 1158 PEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKE 1217
Query: 685 NQMTPMNLAVCLAPSLFHLNLLKKE-SSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMI 743
NQMTP NLAVCLAPSLFHLN LK+E SSPRV+Q+K + GKPDQKDLNENLAA QGLAHMI
Sbjct: 1218 NQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMI 1277
Query: 744 MECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEA 803
EC +LF+VP E+ ++ RNSY E E+ TLE LG + A + +L + GL KE
Sbjct: 1278 AECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDGLFKEV 1336
Query: 804 KEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDF 863
KEKFKGWV+ S+++ +L++KKV +G PL+LW++ +EV A P +L R+L+E+HLWD D
Sbjct: 1337 KEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHLWDVDL 1396
Query: 864 VQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQL 923
+ KV+E LD QTEIYQYV NSMAPHP+RD+VVLRTW+T+LPKG C L+ SV+H+ A +
Sbjct: 1397 LDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDRAPV 1456
Query: 924 LGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSF 983
+ GVR V+ S+YLIEPCG GKS+LT++CR+DL+GH PEWY+K FGHLCAAEV +IR+SF
Sbjct: 1457 V-GVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSF 1515
Query: 984 QPLIAEGPETK 994
E +TK
Sbjct: 1516 SNQNTETKDTK 1526
>gi|33188437 deleted in liver cancer 1 isoform 2 [Homo sapiens]
Length = 1091
Score = 999 bits (2583), Expect = 0.0
Identities = 558/1031 (54%), Positives = 721/1031 (69%), Gaps = 53/1031 (5%)
Query: 1 MKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDR-NGSPGGTG 58
MKL+++ RK+ DDSDE++ C IS KWTFQR S+RWSR+++ P+ D GSP +
Sbjct: 75 MKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGSPDDSH 134
Query: 59 MRNTTSSESVLTDLSE-PEVCSIHSESSGGS-DSRSQPGQ-------------CCTDNPV 103
++ S L DLSE EV S+ S SS GS S + P + C + N
Sbjct: 135 PKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCSSSNLA 194
Query: 104 MLDAPLVSSSLPQPPRDVLNHPFHPK-NEKPTRARAKSFLKRMETLRGKGAH-GRHKGSG 161
D SLP P +++ + F K +EK +++ +S LKRME+L+ K +H +HK
Sbjct: 195 GNDDSF--GSLPSP-KELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSKHKAPS 251
Query: 162 RTGGLVISGPMLQQ--EPESFKAMQCIQIP--NGDLQNSPPPACRKGLPCSGKSSGESSP 217
+ G L+ISGP+LQ+ + E K + C++I NG+ N P ++ + S ++S SS
Sbjct: 252 KLG-LIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVR-KRSVSNSTQTSSSSSQ 309
Query: 218 SEHSSSGVSTPC--LKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENL 275
SE +SS VSTP + R NKR GMYLE D + + +Q+ + E+
Sbjct: 310 SE-TSSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDT 368
Query: 276 VVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRTGS------ISLGREQVPGAREP--R 327
V +IP+DHKPGTFPKAL+ S SP+ ++ VNWRTGS ISL RE + + R
Sbjct: 369 VFYIPEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKR 428
Query: 328 LMASCHRASRVSIYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSK 387
+S +SR+SIYDNVPGS LY+S+GDL DLE +D+FP LDDIL HV G+Q +V+ WS+
Sbjct: 429 RNSSSSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSE 488
Query: 388 DVLPELQTHDTLVGEPGLSTFPS-PNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPP 446
E + L +S PS P QI LD V RTTPSD++ SLNE E P
Sbjct: 489 KFSDEGDSDSAL---DSVSPCPSSPKQIHLD-----VDNDRTTPSDLDSTGNSLNEPEEP 540
Query: 447 G-VRDRRDSGVGASLTRPNR-RLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLL 504
+ +RRDSGVGASLTR NR RLRW+SFQ SH+P S I+ Q+ +Q++LLQ++SLL
Sbjct: 541 SEIPERRDSGVGASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQKYSLL 600
Query: 505 RLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQ 564
+LTA++EK++ SNKHG++W+VPKFMKR+KVPDYKD++VFGVPL V+VQRTGQPLPQSIQQ
Sbjct: 601 KLTALLEKYTPSNKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQ 660
Query: 565 ALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDL 624
A+RYLR++CLDQVGLFRKSGVKSRI ALRQMNE + VNYE QSAYDVADM+KQ+FRDL
Sbjct: 661 AMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDL 720
Query: 625 PEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEE 684
PEPL TNKLSETFL IYQYV K+QRLQA++AAI+LL DENREVLQTLL FL+DV V+E
Sbjct: 721 PEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKE 780
Query: 685 NQMTPMNLAVCLAPSLFHLNLLKKE-SSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMI 743
NQMTP NLAVCLAPSLFHLN LK+E SSPRV+Q+K + GKPDQKDLNENLAA QGLAHMI
Sbjct: 781 NQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMI 840
Query: 744 MECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEA 803
EC +LF+VP E+ ++ RNSY E E+ TLE LG + A + +L + GL KE
Sbjct: 841 AECKKLFQVPEEM-SRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDGLFKEV 899
Query: 804 KEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDF 863
KEKFKGWV+ S+++ +L++KKV +G PL+LW++ +EV A P +L R+L+E+HLWD D
Sbjct: 900 KEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHLWDVDL 959
Query: 864 VQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQL 923
+ KV+E LD QTEIYQYV NSMAPHP+RD+VVLRTW+T+LPKG C L+ SV+H+ A +
Sbjct: 960 LDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDRAPV 1019
Query: 924 LGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSF 983
+ GVR V+ S+YLIEPCG GKS+LT++CR+DL+GH PEWY+K FGHLCAAEV +IR+SF
Sbjct: 1020 V-GVRVNVLLSRYLIEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSF 1078
Query: 984 QPLIAEGPETK 994
E +TK
Sbjct: 1079 SNQNTETKDTK 1089
>gi|215820652 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 683 bits (1762), Expect = 0.0
Identities = 353/607 (58%), Positives = 452/607 (74%), Gaps = 20/607 (3%)
Query: 401 GEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGV---------RDR 451
GEP TF S + EG+S+S+ + S+++ S+NE+E G R+R
Sbjct: 425 GEP---TFASSLSVE---EGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRER 478
Query: 452 RDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIME 511
RDSGVGASLTRP R+LRW+SFQ SH+P S I+ Q A Q++LL + SLLRLTA ME
Sbjct: 479 RDSGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFME 538
Query: 512 KHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRS 571
K+++ +K GW WS+PKFM+R K PDY+ + VFGVP ++HVQRTGQPLPQSIQQA+RYLRS
Sbjct: 539 KYTVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRS 598
Query: 572 NCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTN 631
CLDQVG+FRKSGVKSRI LRQMNE P+NV YE QSAYDVAD++KQ+FRDLPEP+FT+
Sbjct: 599 QCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTS 658
Query: 632 KLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMN 691
KL+ TFL IYQ + K+Q L A QAA LLL DENREVLQTLL FL+D+ + EENQMT N
Sbjct: 659 KLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGN 717
Query: 692 LAVCLAPSLFHLNLLKKES-SPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLF 750
LAVCLAPS+FHLN+ KK+S SPR+ K+ G+P +DL++N+AA QGL+HMI +C +LF
Sbjct: 718 LAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLF 777
Query: 751 EVPHELVAQSRNSYVEAEIHV--PTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFK 808
+VP ++V Q +SY AE+ P L EL Q + +G + Y+ IQ L ++A E+FK
Sbjct: 778 QVPQDMVLQLCSSYSAAELSPPGPALAEL-RQAQAAGVSLSLYMEENIQDLLRDAAERFK 836
Query: 809 GWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKV 868
GW++ +T+LA +K DG+PL+LWKAS EV APP+VVL+RVLRER LWDED ++ +V
Sbjct: 837 GWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQV 896
Query: 869 VETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVR 928
+E L E+Y YV +SMAPHP RDFVVLR W++DLP+G C LVS S++ E+ GVR
Sbjct: 897 LEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVR 956
Query: 929 AVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIA 988
A+++ SQYL+EPCG G+SRLTHICR DL+G SP+WY+K FGHLCA EVA+IR+SF L A
Sbjct: 957 ALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQA 1016
Query: 989 EGPETKI 995
GPETK+
Sbjct: 1017 AGPETKL 1023
Score = 127 bits (319), Expect = 5e-29
Identities = 121/405 (29%), Positives = 175/405 (43%), Gaps = 84/405 (20%)
Query: 1 MKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGM 59
MKL+V+FQ K+ +DS+EE+ C IS+ W FQ+ S+ WS + L +P G+
Sbjct: 9 MKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLL--------APPSPGL 60
Query: 60 RNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPR 119
T+S ESVLT+LS + I PG+ P D PL+S + Q
Sbjct: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRA----PSSSDRPLLSPTQGQEG- 115
Query: 120 DVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPES 179
P+++ R R +SFLK +E+LR K G + + P ++
Sbjct: 116 --------PQDKAKKRHRNRSFLKHLESLRRKEKSGSQQAEPK------HSPATSEKVSK 161
Query: 180 FKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEAN 239
+ + +CR L + + + SG +T RK EA
Sbjct: 162 ASSFR---------------SCRGFLSAGFYRAKNWAATSAGGSGANT-----RKAWEA- 200
Query: 240 KRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSP 299
P A R ++ + + +VH+P DHKPGTFP++LSIESL P
Sbjct: 201 -----------------WPVAS--FRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCP 241
Query: 300 TDSSNGVNWRTGSISLGREQVPGAREPRLMASC-HRASRVSIYDNVPGSH------LYAS 352
D +W+ G R G R SC S S YDN+P + + A
Sbjct: 242 EDGHRLADWQPGR----RWGCEGRR-----GSCGSTGSHASTYDNLPELYPAEPVMVGAE 292
Query: 353 TGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHD 397
D D E + HLDDILQHV GLQ+ V+ WS+ + P+L D
Sbjct: 293 AEDEDDEESGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
>gi|215820650 StAR-related lipid transfer (START) domain containing 8
isoform a [Homo sapiens]
Length = 1103
Score = 683 bits (1762), Expect = 0.0
Identities = 353/607 (58%), Positives = 452/607 (74%), Gaps = 20/607 (3%)
Query: 401 GEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGV---------RDR 451
GEP TF S + EG+S+S+ + S+++ S+NE+E G R+R
Sbjct: 505 GEP---TFASSLSVE---EGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRER 558
Query: 452 RDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIME 511
RDSGVGASLTRP R+LRW+SFQ SH+P S I+ Q A Q++LL + SLLRLTA ME
Sbjct: 559 RDSGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFME 618
Query: 512 KHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRS 571
K+++ +K GW WS+PKFM+R K PDY+ + VFGVP ++HVQRTGQPLPQSIQQA+RYLRS
Sbjct: 619 KYTVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRS 678
Query: 572 NCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTN 631
CLDQVG+FRKSGVKSRI LRQMNE P+NV YE QSAYDVAD++KQ+FRDLPEP+FT+
Sbjct: 679 QCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTS 738
Query: 632 KLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMN 691
KL+ TFL IYQ + K+Q L A QAA LLL DENREVLQTLL FL+D+ + EENQMT N
Sbjct: 739 KLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGN 797
Query: 692 LAVCLAPSLFHLNLLKKES-SPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLF 750
LAVCLAPS+FHLN+ KK+S SPR+ K+ G+P +DL++N+AA QGL+HMI +C +LF
Sbjct: 798 LAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLF 857
Query: 751 EVPHELVAQSRNSYVEAEIHV--PTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFK 808
+VP ++V Q +SY AE+ P L EL Q + +G + Y+ IQ L ++A E+FK
Sbjct: 858 QVPQDMVLQLCSSYSAAELSPPGPALAEL-RQAQAAGVSLSLYMEENIQDLLRDAAERFK 916
Query: 809 GWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKV 868
GW++ +T+LA +K DG+PL+LWKAS EV APP+VVL+RVLRER LWDED ++ +V
Sbjct: 917 GWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQV 976
Query: 869 VETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVR 928
+E L E+Y YV +SMAPHP RDFVVLR W++DLP+G C LVS S++ E+ GVR
Sbjct: 977 LEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVR 1036
Query: 929 AVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIA 988
A+++ SQYL+EPCG G+SRLTHICR DL+G SP+WY+K FGHLCA EVA+IR+SF L A
Sbjct: 1037 ALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQA 1096
Query: 989 EGPETKI 995
GPETK+
Sbjct: 1097 AGPETKL 1103
Score = 127 bits (319), Expect = 5e-29
Identities = 121/405 (29%), Positives = 175/405 (43%), Gaps = 84/405 (20%)
Query: 1 MKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGM 59
MKL+V+FQ K+ +DS+EE+ C IS+ W FQ+ S+ WS + L +P G+
Sbjct: 89 MKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLL--------APPSPGL 140
Query: 60 RNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPR 119
T+S ESVLT+LS + I PG+ P D PL+S + Q
Sbjct: 141 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRA----PSSSDRPLLSPTQGQEG- 195
Query: 120 DVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPES 179
P+++ R R +SFLK +E+LR K G + + P ++
Sbjct: 196 --------PQDKAKKRHRNRSFLKHLESLRRKEKSGSQQAEPK------HSPATSEKVSK 241
Query: 180 FKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEAN 239
+ + +CR L + + + SG +T RK EA
Sbjct: 242 ASSFR---------------SCRGFLSAGFYRAKNWAATSAGGSGANT-----RKAWEA- 280
Query: 240 KRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSP 299
P A R ++ + + +VH+P DHKPGTFP++LSIESL P
Sbjct: 281 -----------------WPVAS--FRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCP 321
Query: 300 TDSSNGVNWRTGSISLGREQVPGAREPRLMASC-HRASRVSIYDNVPGSH------LYAS 352
D +W+ G R G R SC S S YDN+P + + A
Sbjct: 322 EDGHRLADWQPGR----RWGCEGRR-----GSCGSTGSHASTYDNLPELYPAEPVMVGAE 372
Query: 353 TGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHD 397
D D E + HLDDILQHV GLQ+ V+ WS+ + P+L D
Sbjct: 373 AEDEDDEESGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 417
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 683 bits (1762), Expect = 0.0
Identities = 353/607 (58%), Positives = 452/607 (74%), Gaps = 20/607 (3%)
Query: 401 GEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGV---------RDR 451
GEP TF S + EG+S+S+ + S+++ S+NE+E G R+R
Sbjct: 425 GEP---TFASSLSVE---EGHSISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRER 478
Query: 452 RDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIME 511
RDSGVGASLTRP R+LRW+SFQ SH+P S I+ Q A Q++LL + SLLRLTA ME
Sbjct: 479 RDSGVGASLTRPCRKLRWHSFQNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLTAFME 538
Query: 512 KHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRS 571
K+++ +K GW WS+PKFM+R K PDY+ + VFGVP ++HVQRTGQPLPQSIQQA+RYLRS
Sbjct: 539 KYTVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRS 598
Query: 572 NCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTN 631
CLDQVG+FRKSGVKSRI LRQMNE P+NV YE QSAYDVAD++KQ+FRDLPEP+FT+
Sbjct: 599 QCLDQVGIFRKSGVKSRIQNLRQMNETSPDNVCYEGQSAYDVADLLKQYFRDLPEPIFTS 658
Query: 632 KLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMN 691
KL+ TFL IYQ + K+Q L A QAA LLL DENREVLQTLL FL+D+ + EENQMT N
Sbjct: 659 KLTTTFLQIYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDIAS-AEENQMTAGN 717
Query: 692 LAVCLAPSLFHLNLLKKES-SPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLF 750
LAVCLAPS+FHLN+ KK+S SPR+ K+ G+P +DL++N+AA QGL+HMI +C +LF
Sbjct: 718 LAVCLAPSIFHLNVSKKDSPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLF 777
Query: 751 EVPHELVAQSRNSYVEAEIHV--PTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFK 808
+VP ++V Q +SY AE+ P L EL Q + +G + Y+ IQ L ++A E+FK
Sbjct: 778 QVPQDMVLQLCSSYSAAELSPPGPALAEL-RQAQAAGVSLSLYMEENIQDLLRDAAERFK 836
Query: 809 GWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKV 868
GW++ +T+LA +K DG+PL+LWKAS EV APP+VVL+RVLRER LWDED ++ +V
Sbjct: 837 GWMSVPGPQHTELACRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQV 896
Query: 869 VETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVR 928
+E L E+Y YV +SMAPHP RDFVVLR W++DLP+G C LVS S++ E+ GVR
Sbjct: 897 LEALMPGVELYHYVTDSMAPHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESGVR 956
Query: 929 AVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIA 988
A+++ SQYL+EPCG G+SRLTHICR DL+G SP+WY+K FGHLCA EVA+IR+SF L A
Sbjct: 957 ALMLTSQYLMEPCGLGRSRLTHICRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQA 1016
Query: 989 EGPETKI 995
GPETK+
Sbjct: 1017 AGPETKL 1023
Score = 127 bits (319), Expect = 5e-29
Identities = 121/405 (29%), Positives = 175/405 (43%), Gaps = 84/405 (20%)
Query: 1 MKLDVNFQRKKGDDSDEEDLC-ISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGM 59
MKL+V+FQ K+ +DS+EE+ C IS+ W FQ+ S+ WS + L +P G+
Sbjct: 9 MKLEVHFQSKQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLL--------APPSPGL 60
Query: 60 RNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPR 119
T+S ESVLT+LS + I PG+ P D PL+S + Q
Sbjct: 61 PATSSCESVLTELSATSLPVITVSLPPEPADLPLPGRA----PSSSDRPLLSPTQGQEG- 115
Query: 120 DVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPES 179
P+++ R R +SFLK +E+LR K G + + P ++
Sbjct: 116 --------PQDKAKKRHRNRSFLKHLESLRRKEKSGSQQAEPK------HSPATSEKVSK 161
Query: 180 FKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEAN 239
+ + +CR L + + + SG +T RK EA
Sbjct: 162 ASSFR---------------SCRGFLSAGFYRAKNWAATSAGGSGANT-----RKAWEA- 200
Query: 240 KRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSP 299
P A R ++ + + +VH+P DHKPGTFP++LSIESL P
Sbjct: 201 -----------------WPVAS--FRHPQWTHRGDCLVHVPGDHKPGTFPRSLSIESLCP 241
Query: 300 TDSSNGVNWRTGSISLGREQVPGAREPRLMASC-HRASRVSIYDNVPGSH------LYAS 352
D +W+ G R G R SC S S YDN+P + + A
Sbjct: 242 EDGHRLADWQPGR----RWGCEGRR-----GSCGSTGSHASTYDNLPELYPAEPVMVGAE 292
Query: 353 TGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHD 397
D D E + HLDDILQHV GLQ+ V+ WS+ + P+L D
Sbjct: 293 AEDEDDEESGGSYAHLDDILQHVWGLQQRVELWSRAMYPDLGPGD 337
>gi|39932589 Rho GTPase activating protein 18 [Homo sapiens]
Length = 663
Score = 103 bits (257), Expect = 8e-22
Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 56/370 (15%)
Query: 417 DFEGNSVSEGRTTP--------SDVERDVT----SLNESEPPGVRDRRDSGVGASLTRPN 464
D N V E + P +D+ +V+ +LN+ E + ++ G A+L
Sbjct: 206 DEASNLVGEEKLIPPEETPAPETDINLEVSFAEQALNQKESSKEKIQKSKGDDATLP--- 262
Query: 465 RRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWS 524
SF+L P+ + I + + +L+ LTA+ + + K
Sbjct: 263 ------SFRL---PKDKTGTTRIGDLAPQDMKKVCHLALIELTALYDVLGIELKQ----- 308
Query: 525 VPKFMKRMKVPDYKDKAVFGVPLIVHVQRT-----GQPLPQSIQQALRYLRSNCLDQVGL 579
K +K+ KD +F VPL +++ G +P Q+ + + L+ GL
Sbjct: 309 ----QKAVKIKT-KDSGLFCVPLTALLEQDQRKVPGMRIPLIFQKLISRIEERGLETEGL 363
Query: 580 FRKSGVKSRIHAL-RQMNENFPENV-NYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETF 637
R G RI L +++ F E N+E +D A ++K F R+LP+PL + + + F
Sbjct: 364 LRIPGAAIRIKNLCQELEAKFYEGTFNWESVKQHDAASLLKLFIRELPQPLLSVEYLKAF 423
Query: 638 LHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLA 697
+ +K+Q+LQA+ ++LL D NR+ L+ LL FL V++ E+N+MT MN+A+ +A
Sbjct: 424 QAVQNLPTKKQQLQALNLLVILLPDANRDTLKALLEFLQRVIDNKEKNKMTVMNVAMVMA 483
Query: 698 PSLFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDR-LFEVPHEL 756
P+LF + L +SS Q+++ A H++++ + L+ +P +
Sbjct: 484 PNLFMCHALGLKSSE---QREFVMA-----------AGTANTMHLLIKYQKLLWTIPKFI 529
Query: 757 VAQSRNSYVE 766
V Q R E
Sbjct: 530 VNQVRKQNTE 539
>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 91.7 bits (226), Expect = 3e-18
Identities = 74/242 (30%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 529 MKRMKVPDYK--DKAVFGVPLIVHVQRTGQPLPQS-----IQQALRYLRSNCLDQVGLFR 581
+KR K +K + +FGVPL ++ + LP + +Q L L LD G+ R
Sbjct: 252 LKRSKAGKWKAAETRLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILR 311
Query: 582 KSGVKSRIHALRQMNEN--FPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLH 639
G ++R+ L Q E + ++++ D +D++K+F R LP PL T + F
Sbjct: 312 VPGSQARVKGLEQKLERDFYAGLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAV 371
Query: 640 IYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPS 699
+ + +QRLQ + IL+L + NR L+ LL FL VV + N+MT N++ +AP+
Sbjct: 372 VPNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPN 431
Query: 700 LFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQ 759
LF L+ + P+ +K+ A G AA+ + M+ D L+ V LVAQ
Sbjct: 432 LF-LHQGRPPKLPKGKEKQLAEG------------AAEVVQIMVHYQDLLWTVASFLVAQ 478
Query: 760 SR 761
R
Sbjct: 479 VR 480
>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 91.7 bits (226), Expect = 3e-18
Identities = 74/242 (30%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 529 MKRMKVPDYK--DKAVFGVPLIVHVQRTGQPLPQS-----IQQALRYLRSNCLDQVGLFR 581
+KR K +K + +FGVPL ++ + LP + +Q L L LD G+ R
Sbjct: 252 LKRSKAGKWKAAETRLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILR 311
Query: 582 KSGVKSRIHALRQMNEN--FPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLH 639
G ++R+ L Q E + ++++ D +D++K+F R LP PL T + F
Sbjct: 312 VPGSQARVKGLEQKLERDFYAGLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAV 371
Query: 640 IYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPS 699
+ + +QRLQ + IL+L + NR L+ LL FL VV + N+MT N++ +AP+
Sbjct: 372 VPNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPN 431
Query: 700 LFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQ 759
LF L+ + P+ +K+ A G AA+ + M+ D L+ V LVAQ
Sbjct: 432 LF-LHQGRPPKLPKGKEKQLAEG------------AAEVVQIMVHYQDLLWTVASFLVAQ 478
Query: 760 SR 761
R
Sbjct: 479 VR 480
>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
sapiens]
Length = 622
Score = 91.7 bits (226), Expect = 3e-18
Identities = 74/242 (30%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 529 MKRMKVPDYK--DKAVFGVPLIVHVQRTGQPLPQS-----IQQALRYLRSNCLDQVGLFR 581
+KR K +K + +FGVPL ++ + LP + +Q L L LD G+ R
Sbjct: 252 LKRSKAGKWKAAETRLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILR 311
Query: 582 KSGVKSRIHALRQMNEN--FPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLH 639
G ++R+ L Q E + ++++ D +D++K+F R LP PL T + F
Sbjct: 312 VPGSQARVKGLEQKLERDFYAGLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAV 371
Query: 640 IYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPS 699
+ + +QRLQ + IL+L + NR L+ LL FL VV + N+MT N++ +AP+
Sbjct: 372 VPNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPN 431
Query: 700 LFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQ 759
LF L+ + P+ +K+ A G AA+ + M+ D L+ V LVAQ
Sbjct: 432 LF-LHQGRPPKLPKGKEKQLAEG------------AAEVVQIMVHYQDLLWTVASFLVAQ 478
Query: 760 SR 761
R
Sbjct: 479 VR 480
>gi|156071465 Rho GTPase activating protein 4 [Homo sapiens]
Length = 946
Score = 84.3 bits (207), Expect = 5e-16
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 491 TASQLSLLQRFSLLRLTAIMEKHSMSNKHG--------WTWSVPKFMKRMKVP---DYKD 539
T Q L R L +L A EK + + G WT + ++ + P +
Sbjct: 442 TKLQEYLSGRSILAKLQAKHEKLQEALQRGDKEEQEVSWTQYTQRKFQKSRQPRPSSQYN 501
Query: 540 KAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENF 599
+ +FG + +Q +GQP+P ++ +R++ N L G+FR SG + R+ +R E
Sbjct: 502 QRLFGGDMEKFIQSSGQPVPLVVESCIRFINLNGLQHEGIFRVSGAQLRVSEIRDAFER- 560
Query: 600 PENVNYEDQSAYD---VADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAA 656
E+ E +A+D VA ++K +FR L PLF L L + + +R++ V
Sbjct: 561 GEDPLVEGCTAHDLDSVAGVLKLYFRSLEPPLFPPDLFGELLASSELEATAERVEHVSRL 620
Query: 657 ILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
+ L VL+ L FLN + +EN M P NLAVC P+L
Sbjct: 621 LWRLPAPVLVVLRYLFTFLNHLAQYSDENMMDPYNLAVCFGPTL 664
>gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens]
Length = 771
Score = 84.3 bits (207), Expect = 5e-16
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 28/225 (12%)
Query: 558 LPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNY---EDQSAYDVA 614
+P+ + ++L + L VG+FR K R+ RQ+ E F ++ E+ S +DVA
Sbjct: 207 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRV---RQLREEFDRGIDVSLEEEHSVHDVA 263
Query: 615 DMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCF 674
++K+F RD+P+PL T +L F++ + E++L +Q I LL N + L LL F
Sbjct: 264 ALLKEFLRDMPDPLLTRELYTAFINTL-LLEPEEQLGTLQLLIYLLPPCNCDTLHRLLQF 322
Query: 675 LNDVVNLVEE-----------NQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYATGK 723
L+ V ++ N+MT +NLA P+L H K++SS K+++
Sbjct: 323 LSIVARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLH----KQKSS----DKEFSVQS 374
Query: 724 PDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAE 768
+ + E+ A + MI + LF VP +L + S +E +
Sbjct: 375 SARAE--ESTAIIAVVQKMIENYEALFMVPPDLQNEVLISLLETD 417
>gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo
sapiens]
Length = 765
Score = 84.3 bits (207), Expect = 5e-16
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 28/225 (12%)
Query: 558 LPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNY---EDQSAYDVA 614
+P+ + ++L + L VG+FR K R+ RQ+ E F ++ E+ S +DVA
Sbjct: 410 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRV---RQLREEFDRGIDVSLEEEHSVHDVA 466
Query: 615 DMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCF 674
++K+F RD+P+PL T +L F++ + E++L +Q I LL N + L LL F
Sbjct: 467 ALLKEFLRDMPDPLLTRELYTAFINTL-LLEPEEQLGTLQLLIYLLPPCNCDTLHRLLQF 525
Query: 675 LNDVVNLVEE-----------NQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYATGK 723
L+ V ++ N+MT +NLA P+L H K++SS K+++
Sbjct: 526 LSIVARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLH----KQKSS----DKEFSVQS 577
Query: 724 PDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAE 768
+ + E+ A + MI + LF VP +L + S +E +
Sbjct: 578 SARAE--ESTAIIAVVQKMIENYEALFMVPPDLQNEVLISLLETD 620
>gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo
sapiens]
Length = 974
Score = 84.3 bits (207), Expect = 5e-16
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 28/225 (12%)
Query: 558 LPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNY---EDQSAYDVA 614
+P+ + ++L + L VG+FR K R+ RQ+ E F ++ E+ S +DVA
Sbjct: 410 VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRV---RQLREEFDRGIDVSLEEEHSVHDVA 466
Query: 615 DMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCF 674
++K+F RD+P+PL T +L F++ + E++L +Q I LL N + L LL F
Sbjct: 467 ALLKEFLRDMPDPLLTRELYTAFINTL-LLEPEEQLGTLQLLIYLLPPCNCDTLHRLLQF 525
Query: 675 LNDVVNLVEE-----------NQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYATGK 723
L+ V ++ N+MT +NLA P+L H K++SS K+++
Sbjct: 526 LSIVARHADDNISKDGQEVTGNKMTSLNLATIFGPNLLH----KQKSS----DKEFSVQS 577
Query: 724 PDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAE 768
+ + E+ A + MI + LF VP +L + S +E +
Sbjct: 578 SARAE--ESTAIIAVVQKMIENYEALFMVPPDLQNEVLISLLETD 620
>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
sapiens]
Length = 1499
Score = 82.4 bits (202), Expect = 2e-15
Identities = 49/159 (30%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 543 FGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHAL-RQMNENFPE 601
FGVPL V +P+P I++ + Y+ + L G++R SG KS + +L RQ +++
Sbjct: 1247 FGVPLTT-VVTPEKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNL 1305
Query: 602 NVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLA 661
++ +D + VA +K FF +LP+PL + + ++ +EQ+L A++ +
Sbjct: 1306 DLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFP 1365
Query: 662 DENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
EN EV + ++ LN V + + N MT NL++C P+L
Sbjct: 1366 KENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTL 1404
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 82.4 bits (202), Expect = 2e-15
Identities = 51/159 (32%), Positives = 80/159 (50%)
Query: 542 VFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPE 601
V+GV L H+Q G+ + I+ + L S + + GLFR + S + L+Q + P
Sbjct: 273 VYGVSLATHLQELGREIALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASDPH 332
Query: 602 NVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLA 661
++ + VA +K + R+LPEPL T L + ++ RLQA+Q L
Sbjct: 333 SLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCSRLP 392
Query: 662 DENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
EN L+ L+ FL + E N+MTP N+A+ L P+L
Sbjct: 393 PENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNL 431
>gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a
[Homo sapiens]
Length = 1099
Score = 80.5 bits (197), Expect = 7e-15
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 526 PKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGV 585
P+ M+R + +F + ++ +GQ +P ++ +RY+ L Q G+FR G
Sbjct: 487 PQKMRRPRPLSVYSHKLFNGSMEAFIKDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGS 546
Query: 586 KSRIHALRQMNENFPENVNYEDQSAYD---VADMVKQFFRDLPEPLFTNKLSETFLHIYQ 642
+ ++ ++ E E+ +DQ+ D VA ++K +FR L PLF + + + +
Sbjct: 547 QVEVNDIKNSFER-GEDPLVDDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISTIK 605
Query: 643 YVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFH 702
+ +R+ +Q ++ L V++ L FLN + +EN M P NLA+C P+L H
Sbjct: 606 LENPAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMH 665
Query: 703 L 703
+
Sbjct: 666 I 666
>gi|59710113 Rho GTPase activating protein 28 isoform a [Homo
sapiens]
Length = 570
Score = 79.7 bits (195), Expect = 1e-14
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 18/219 (8%)
Query: 491 TASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVH 550
+A + ++ SL+ LTA + + K T V +D +FGVPL V
Sbjct: 177 SAEDMKKIRHLSLIELTAFFDAFGIQLKRNKTEKVKG----------RDNGIFGVPLTVL 226
Query: 551 V-----QRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQ-MNENF-PENV 603
+ + G +P +Q+ + + L+ G+FR SG +++ R+ ++ F +
Sbjct: 227 LDGDRKKDPGVKVPLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKF 286
Query: 604 NYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQ-RLQAVQAAILLLAD 662
++ + A M+K FFR+LP LF + F+ + + + + QA+ ++ L D
Sbjct: 287 KWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFISLMERGPHVKVQFQALHLMVMALPD 346
Query: 663 ENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLF 701
NR+ Q L+ F N V+ +N+M+ N++ +AP+LF
Sbjct: 347 ANRDAAQALMTFFNKVIANESKNRMSLWNISTVMAPNLF 385
>gi|59710111 Rho GTPase activating protein 28 isoform b [Homo
sapiens]
Length = 563
Score = 79.7 bits (195), Expect = 1e-14
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 18/219 (8%)
Query: 491 TASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVH 550
+A + ++ SL+ LTA + + K T V +D +FGVPL V
Sbjct: 177 SAEDMKKIRHLSLIELTAFFDAFGIQLKRNKTEKVKG----------RDNGIFGVPLTVL 226
Query: 551 V-----QRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQ-MNENF-PENV 603
+ + G +P +Q+ + + L+ G+FR SG +++ R+ ++ F +
Sbjct: 227 LDGDRKKDPGVKVPLVLQKFFEKVEESGLESEGIFRLSGCTAKVKQYREELDAKFNADKF 286
Query: 604 NYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQ-RLQAVQAAILLLAD 662
++ + A M+K FFR+LP LF + F+ + + + + QA+ ++ L D
Sbjct: 287 KWDKMCHREAAVMLKAFFRELPTSLFPVEYIPAFISLMERGPHVKVQFQALHLMVMALPD 346
Query: 663 ENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLF 701
NR+ Q L+ F N V+ +N+M+ N++ +AP+LF
Sbjct: 347 ANRDAAQALMTFFNKVIANESKNRMSLWNISTVMAPNLF 385
>gi|5803145 ralA binding protein 1 [Homo sapiens]
Length = 655
Score = 78.2 bits (191), Expect = 4e-14
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 540 KAVFGVPLIVHVQRT----GQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQM 595
K +FG+PL V+RT G LP ++ + Y+ + G++R SG+KS++ L+
Sbjct: 187 KPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAA 246
Query: 596 NENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQA 655
+ E+ N ED VA ++KQ+ RDLPE L T +L F ++ +++Q Q
Sbjct: 247 YDR-EESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQR 305
Query: 656 AILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
+ L + N ++ L+ ++ V+ E +M N+++ L+P++
Sbjct: 306 LLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTV 350
>gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b
[Homo sapiens]
Length = 1075
Score = 77.8 bits (190), Expect = 5e-14
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 552 QRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAY 611
Q +GQ +P ++ +RY+ L Q G+FR G + ++ ++ E E+ +DQ+
Sbjct: 489 QDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFER-GEDPLVDDQNER 547
Query: 612 D---VADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVL 668
D VA ++K +FR L PLF + + + + + +R+ +Q ++ L V+
Sbjct: 548 DINSVAGVLKLYFRGLENPLFPKERFQDLISTIKLENPAERVHQIQQILVTLPRVVIVVM 607
Query: 669 QTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHL 703
+ L FLN + +EN M P NLA+C P+L H+
Sbjct: 608 RYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHI 642
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 77.4 bits (189), Expect = 6e-14
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 558 LPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMV 617
+P +++ L ++ + L GL+RKSG +R LRQ + P V E+ + + ++
Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771
Query: 618 KQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLND 677
KQ+ R+LPEPL T FL + K+++L A+ A + L + N L+ L+ L
Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831
Query: 678 VVNLVEENQMTPMNLAVCLAPSL 700
V L + N+M+P LA+ AP L
Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCL 1854
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 77.4 bits (189), Expect = 6e-14
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 558 LPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMV 617
+P +++ L ++ + L GL+RKSG +R LRQ + P V E+ + + ++
Sbjct: 1712 VPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLENFPIHAITGVL 1771
Query: 618 KQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLND 677
KQ+ R+LPEPL T FL + K+++L A+ A + L + N L+ L+ L
Sbjct: 1772 KQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLEHLPEANHNSLERLIFHLVK 1831
Query: 678 VVNLVEENQMTPMNLAVCLAPSL 700
V L + N+M+P LA+ AP L
Sbjct: 1832 VALLEDVNRMSPGALAIIFAPCL 1854
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 75.5 bits (184), Expect = 2e-13
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
Query: 543 FGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPEN 602
FGV L + + +P +++ + Y+ + L G++RKSG ++I LRQ + E+
Sbjct: 2061 FGVELS-RLTSEDRTVPLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDAES 2119
Query: 603 VNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLAD 662
VN +D + + +A + KQ+ RDLP PL T +L E FL +++ ++ V + I L+
Sbjct: 2120 VNLDDYNIHVIASVFKQWLRDLPNPLMTFELYEEFLRAMGLQERKETIRGVYSVIDQLSR 2179
Query: 663 ENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
+ L+ L+ L + + N+M+ LA+ AP +
Sbjct: 2180 THLNTLERLIFHLVRIALQEDTNRMSANALAIVFAPCI 2217
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 75.1 bits (183), Expect = 3e-13
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 537 YKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMN 596
+ +K FG PL H++R+G+ + I+ + L + + GLFR S++ L+
Sbjct: 244 WAEKPAFGTPLEEHLKRSGREIALPIEACVMLLLETGMKEEGLFRIGAGASKLKKLKAAL 303
Query: 597 ENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAA 656
+ +++ + VA +K + R+LPEPL T L E + + ++++LQ +
Sbjct: 304 DCSTSHLDEFYSDPHAVAGALKSYLRELPEPLMTFNLYEEWTQVASVQDQDKKLQDLWRT 363
Query: 657 ILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
L +N + L+ FL + + N+MTP N+A+ L P+L
Sbjct: 364 CQKLPPQNFVNFRYLIKFLAKLAQTSDVNKMTPSNIAIVLGPNL 407
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 75.1 bits (183), Expect = 3e-13
Identities = 44/164 (26%), Positives = 82/164 (50%)
Query: 537 YKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMN 596
+ +K FG PL H++R+G+ + I+ + L + + GLFR S++ L+
Sbjct: 244 WAEKPAFGTPLEEHLKRSGREIALPIEACVMLLLETGMKEEGLFRIGAGASKLKKLKAAL 303
Query: 597 ENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAA 656
+ +++ + VA +K + R+LPEPL T L E + + ++++LQ +
Sbjct: 304 DCSTSHLDEFYSDPHAVAGALKSYLRELPEPLMTFNLYEEWTQVASVQDQDKKLQDLWRT 363
Query: 657 ILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
L +N + L+ FL + + N+MTP N+A+ L P+L
Sbjct: 364 CQKLPPQNFVNFRYLIKFLAKLAQTSDVNKMTPSNIAIVLGPNL 407
>gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo
sapiens]
Length = 1085
Score = 73.6 bits (179), Expect = 9e-13
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 542 VFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPE 601
+F L V+ +GQ +P ++ +R++ L G+FR SG + ++ ++ E E
Sbjct: 503 LFNGDLETFVKDSGQVIPLIVESCIRFINLYGLQHQGIFRVSGSQVEVNDIKNSFER-GE 561
Query: 602 NVNYEDQSAYD---VADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAIL 658
N +DQS +D VA ++K +FR L PLF + + + + +R ++ +L
Sbjct: 562 NPLADDQSNHDINSVAGVLKLYFRGLENPLFPKERFNDLISCIRIDNLYERALHIRKLLL 621
Query: 659 LLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
L V++ L FLN + +EN M P NLA+C P+L
Sbjct: 622 TLPRSVLIVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTL 663
>gi|188497642 ARHGAP15 [Homo sapiens]
Length = 475
Score = 73.6 bits (179), Expect = 9e-13
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 542 VFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPE 601
+FG L +R +P ++Q + + LD G++R SG + I LR + N E
Sbjct: 278 IFGSHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIYRVSGNLATIQKLRFI-VNQEE 336
Query: 602 NVNYEDQSAYD---VADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAIL 658
+N +D D V +K FFR+LPEPLF E F+ + R++AV++ +
Sbjct: 337 KLNLDDSQWEDIHVVTGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQ 396
Query: 659 LLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL 700
L NR+ ++ L L +V +N M+ +L + P+L
Sbjct: 397 KLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLGIVFGPTL 438
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,685,110
Number of Sequences: 37866
Number of extensions: 2150627
Number of successful extensions: 6704
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 6420
Number of HSP's gapped (non-prelim): 234
length of query: 995
length of database: 18,247,518
effective HSP length: 112
effective length of query: 883
effective length of database: 14,006,526
effective search space: 12367762458
effective search space used: 12367762458
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.