Search of human proteins with 163659903

Search of human proteins with 163659903

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|163659903 insulin-like growth factor 1 isoform 3
preproprotein [Homo sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|163659903 insulin-like growth factor 1 isoform 3 preproprotei...   409   e-115
gi|163659899 insulin-like growth factor 1 isoform 1 preproprotei...   317   3e-87
gi|11024682 insulin-like growth factor 1 isoform 4 preproprotein...   282   1e-76
gi|163659901 insulin-like growth factor 1 isoform 2 preproprotei...   236   7e-63
gi|4504609 insulin-like growth factor 2 isoform 1 precursor [Hom...    94   1e-19
gi|108796063 insulin-like growth factor 2 isoform 1 precursor [H...    94   1e-19
gi|189083846 insulin-like growth factor 2 isoform 2 [Homo sapiens]     94   1e-19
gi|4557671 proinsulin precursor [Homo sapiens]                         49   2e-06
gi|109148522 insulin- insulin-like growth factor 2 [Homo sapiens]      37   0.011
gi|224591430 Ly1 antibody reactive homolog [Homo sapiens]              34   0.069
gi|8923398 Ly1 antibody reactive homolog [Homo sapiens]                34   0.069
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    32   0.34 
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    32   0.34 
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            30   1.00 
gi|149944433 hampin [Homo sapiens]                                     30   1.3  
gi|95147333 phospholipase C, beta 2 [Homo sapiens]                     30   1.7  
gi|94421024 CD83 antigen isoform b [Homo sapiens]                      30   1.7  
gi|4757946 CD83 antigen isoform a [Homo sapiens]                       30   1.7  
gi|16579828 zinc finger protein 91 [Homo sapiens]                      30   1.7  
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ...    29   2.2  
gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens]          29   2.2  
gi|5902052 relaxin 1 preproprotein [Homo sapiens]                      29   2.9  
gi|189491628 enamelin [Homo sapiens]                                   29   2.9  
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    29   2.9  
gi|23503297 protease, serine, 35 [Homo sapiens]                        29   2.9  
gi|5016090 nuclear receptor subfamily 0, group B, member 1 [Homo...    28   3.8  
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera...    28   3.8  
gi|21464119 methyl-CpG binding domain protein 1 isoform PCM1 [Ho...    28   3.8  
gi|21464117 methyl-CpG binding domain protein 1 isoform 1 [Homo ...    28   3.8  
gi|223555917 metadherin [Homo sapiens]                                 28   4.9  

>gi|163659903 insulin-like growth factor 1 isoform 3 preproprotein
           [Homo sapiens]
          Length = 195

 Score =  409 bits (1051), Expect = e-115
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD 60
           MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
Sbjct: 1   MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD 60

Query: 61  ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS 120
           ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
Sbjct: 61  ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS 120

Query: 121 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRR 180
           VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRR
Sbjct: 121 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRR 180

Query: 181 EIGSRNAECRGKKGK 195
           EIGSRNAECRGKKGK
Sbjct: 181 EIGSRNAECRGKKGK 195


>gi|163659899 insulin-like growth factor 1 isoform 1 preproprotein
           [Homo sapiens]
          Length = 158

 Score =  317 bits (813), Expect = 3e-87
 Identities = 151/151 (100%), Positives = 151/151 (100%)

Query: 1   MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD 60
           MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
Sbjct: 1   MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD 60

Query: 61  ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS 120
           ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
Sbjct: 61  ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS 120

Query: 121 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKG 151
           VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKG
Sbjct: 121 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKG 151


>gi|11024682 insulin-like growth factor 1 isoform 4 preproprotein
           [Homo sapiens]
          Length = 153

 Score =  282 bits (721), Expect = 1e-76
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD 60
           MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
Sbjct: 1   MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD 60

Query: 61  ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS 120
           ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
Sbjct: 61  ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS 120

Query: 121 VRAQRHTDMPKTQK 134
           VRAQRHTDMPKTQK
Sbjct: 121 VRAQRHTDMPKTQK 134


>gi|163659901 insulin-like growth factor 1 isoform 2 preproprotein
           [Homo sapiens]
          Length = 137

 Score =  236 bits (603), Expect = 7e-63
 Identities = 113/113 (100%), Positives = 113/113 (100%)

Query: 22  VKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVDALQFVCGDRGFYFNKPTGYGS 81
           VKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVDALQFVCGDRGFYFNKPTGYGS
Sbjct: 6   VKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVDALQFVCGDRGFYFNKPTGYGS 65

Query: 82  SSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARSVRAQRHTDMPKTQK 134
           SSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARSVRAQRHTDMPKTQK
Sbjct: 66  SSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARSVRAQRHTDMPKTQK 118


>gi|4504609 insulin-like growth factor 2 isoform 1 precursor [Homo
           sapiens]
          Length = 180

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 53/91 (58%), Positives = 58/91 (63%), Gaps = 12/91 (13%)

Query: 37  LCLLTFTSSATA------GPETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTG 90
           L LLTF + A+         ETLCG ELVD LQFVCGDRGFYF++P    S   R    G
Sbjct: 10  LVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSR----G 65

Query: 91  IVDECCFRSCDLRRLEMYCAPLKPAKSARSV 121
           IV+ECCFRSCDL  LE YCA   PAKS R V
Sbjct: 66  IVEECCFRSCDLALLETYCA--TPAKSERDV 94


>gi|108796063 insulin-like growth factor 2 isoform 1 precursor [Homo
           sapiens]
          Length = 180

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 53/91 (58%), Positives = 58/91 (63%), Gaps = 12/91 (13%)

Query: 37  LCLLTFTSSATA------GPETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTG 90
           L LLTF + A+         ETLCG ELVD LQFVCGDRGFYF++P    S   R    G
Sbjct: 10  LVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSR----G 65

Query: 91  IVDECCFRSCDLRRLEMYCAPLKPAKSARSV 121
           IV+ECCFRSCDL  LE YCA   PAKS R V
Sbjct: 66  IVEECCFRSCDLALLETYCA--TPAKSERDV 94


>gi|189083846 insulin-like growth factor 2 isoform 2 [Homo sapiens]
          Length = 236

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 53/91 (58%), Positives = 58/91 (63%), Gaps = 12/91 (13%)

Query: 37  LCLLTFTSSATA------GPETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTG 90
           L LLTF + A+         ETLCG ELVD LQFVCGDRGFYF++P    S   R    G
Sbjct: 66  LVLLTFLAFASCCIAAYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSR----G 121

Query: 91  IVDECCFRSCDLRRLEMYCAPLKPAKSARSV 121
           IV+ECCFRSCDL  LE YCA   PAKS R V
Sbjct: 122 IVEECCFRSCDLALLETYCA--TPAKSERDV 150


>gi|4557671 proinsulin precursor [Homo sapiens]
          Length = 110

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 23/80 (28%)

Query: 53  LCGAELVDALQFVCGDRGFYFNKPT----------------GYGSSSRR-------APQT 89
           LCG+ LV+AL  VCG+RGF++   T                G G+ S +         + 
Sbjct: 30  LCGSHLVEALYLVCGERGFFYTPKTRREAEDLQVGQVELGGGPGAGSLQPLALEGSLQKR 89

Query: 90  GIVDECCFRSCDLRRLEMYC 109
           GIV++CC   C L +LE YC
Sbjct: 90  GIVEQCCTSICSLYQLENYC 109


>gi|109148522 insulin- insulin-like growth factor 2 [Homo sapiens]
          Length = 200

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 14/25 (56%), Positives = 19/25 (76%)

Query: 53 LCGAELVDALQFVCGDRGFYFNKPT 77
          LCG+ LV+AL  VCG+RGF++   T
Sbjct: 30 LCGSHLVEALYLVCGERGFFYTPKT 54


>gi|224591430 Ly1 antibody reactive homolog [Homo sapiens]
          Length = 379

 Score = 34.3 bits (77), Expect = 0.069
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 116 KSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKK 175
           K  R  + +R     K + +Q  S N+  K +++        GGE+      S   R KK
Sbjct: 192 KEERQKKRKREKKELKLENHQENSRNQKPKKRKKGQEADLEAGGEEVPEANGSAGKRSKK 251

Query: 176 KEQRREIGSRNAECRGKKGK 195
           K+QR++  S   E R   GK
Sbjct: 252 KKQRKDSASEE-EARVGAGK 270


>gi|8923398 Ly1 antibody reactive homolog [Homo sapiens]
          Length = 379

 Score = 34.3 bits (77), Expect = 0.069
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 116 KSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKK 175
           K  R  + +R     K + +Q  S N+  K +++        GGE+      S   R KK
Sbjct: 192 KEERQKKRKREKKELKLENHQENSRNQKPKKRKKGQEADLEAGGEEVPEANGSAGKRSKK 251

Query: 176 KEQRREIGSRNAECRGKKGK 195
           K+QR++  S   E R   GK
Sbjct: 252 KKQRKDSASEE-EARVGAGK 270


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 32.0 bits (71), Expect = 0.34
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 110 APLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASL 169
           AP +P  ++ +  A      P +    PP   K  K +     P    G EQK      L
Sbjct: 775 APTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEEL 834

Query: 170 QI-RGKKKEQRREIGSRNAECRGKKGK 195
            +  GK +E  +   +  AE    KGK
Sbjct: 835 AVDTGKAEEPVKSECTEEAEEGPAKGK 861


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 32.0 bits (71), Expect = 0.34
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 110 APLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASL 169
           AP +P  ++ +  A      P +    PP   K  K +     P    G EQK      L
Sbjct: 792 APTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEEL 851

Query: 170 QI-RGKKKEQRREIGSRNAECRGKKGK 195
            +  GK +E  +   +  AE    KGK
Sbjct: 852 AVDTGKAEEPVKSECTEEAEEGPAKGK 878


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 30.4 bits (67), Expect = 1.00
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 131 KTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQ---KEGTEASLQIRGKKKEQRREIGSRNA 187
           K +K +   T+K  K + RK   K     E+   KE  E   + + +KK +R+++G +  
Sbjct: 117 KKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEE 176

Query: 188 ECRGKKGK 195
           E + K+ K
Sbjct: 177 ERKEKERK 184



 Score = 28.9 bits (63), Expect = 2.9
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 126 HTDMPKTQK-YQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRREIGS 184
           H   P TQ  +Q     +  + + RK   K      +KE  E   + R ++KE++RE G 
Sbjct: 24  HISKPCTQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGK 83

Query: 185 RNAECRGKK 193
           +  +   KK
Sbjct: 84  KEKKGERKK 92


>gi|149944433 hampin [Homo sapiens]
          Length = 351

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 20/116 (17%)

Query: 54  CGAELVDALQ------FVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRR--- 104
           C  EL +  Q      F CG  G    + + +GS+ R+ P   +  E  F     +    
Sbjct: 41  CQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPE--FSKVKTKTPKH 98

Query: 105 ---LEMYCAPLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHP 157
               E  C  L      R +R+Q   + P++    PP  +   K       P THP
Sbjct: 99  SPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKG------PSTHP 148


>gi|95147333 phospholipase C, beta 2 [Homo sapiens]
          Length = 1185

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 111 PLKPAKSARSVRAQRHTDMPKTQKYQ---PPSTNKNTKSQRRKGWPKTHPGGE-----QK 162
           PLKP     S    R   + K +K Q   P S++K+T  +     P + P GE      +
Sbjct: 441 PLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAGEGTVWAGE 500

Query: 163 EGTEASLQIRGKKKEQRREIGSRNAE 188
           EGTE  L+    ++E+  E G+ + E
Sbjct: 501 EGTE--LEEEEVEEEEEEESGNLDEE 524


>gi|94421024 CD83 antigen isoform b [Homo sapiens]
          Length = 204

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 102 LRRLEMYCA-PLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGE 160
           L+ L + CA  L PA     V      D+P T  + P       +      W K   GGE
Sbjct: 5   LQLLLLSCAYSLAPATPEVKVACSEDVDLPCTAPWDP-------QVPYTVSWVKLLEGGE 57

Query: 161 QKEGTEASLQIRGKKKEQRREIGSRNA 187
           ++  T     +RG+   Q+ + GS +A
Sbjct: 58  ERMETPQEDHLRGQHYHQKGQNGSFDA 84


>gi|4757946 CD83 antigen isoform a [Homo sapiens]
          Length = 205

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 102 LRRLEMYCA-PLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGE 160
           L+ L + CA  L PA     V      D+P T  + P       +      W K   GGE
Sbjct: 5   LQLLLLSCAYSLAPATPEVKVACSEDVDLPCTAPWDP-------QVPYTVSWVKLLEGGE 57

Query: 161 QKEGTEASLQIRGKKKEQRREIGSRNA 187
           ++  T     +RG+   Q+ + GS +A
Sbjct: 58  ERMETPQEDHLRGQHYHQKGQNGSFDA 84


>gi|16579828 zinc finger protein 91 [Homo sapiens]
          Length = 570

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 128 DMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRREI 182
           D P+ + Y+P    +  K +R+ G  K     E+KE  E  +++  + KE+  EI
Sbjct: 228 DDPRDETYKPHLERETPKPRRKSGKVK-----EEKEKKEIKVEVEVEVKEEENEI 277


>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
           sapiens]
          Length = 321

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 148 RRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRREIGSRNAECRGKK 193
           RR+GW K    G  K+   A  +  GKK  Q+ E G +    RG+K
Sbjct: 209 RRRGWKKLRRRG--KKAAAAGGEKAGKKLRQQGEKGRKKPRRRGQK 252


>gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens]
          Length = 193

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 109 CAPLKPAKSARSVRAQRHTDMPKTQKYQP----PSTNKNTKSQRRKGWPKTHPGGEQKEG 164
           CAP  P     ++   R    P+++   P    P  + +   Q  +    + PG      
Sbjct: 60  CAPTAPPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGALAGGP 119

Query: 165 TEASLQIRGKKKEQRREIGSR 185
           T+A+  +RG++++  REIG++
Sbjct: 120 TQAAPGVRGEEEQWAREIGAQ 140


>gi|5902052 relaxin 1 preproprotein [Homo sapiens]
          Length = 185

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 81  SSSRRAPQTGIVDECCFRSCDLRRLEMYC 109
           S  +R P   + ++CC   C  R L  YC
Sbjct: 157 SQKKRRPYVALFEKCCLIGCTKRSLAKYC 185


>gi|189491628 enamelin [Homo sapiens]
          Length = 1142

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 16/53 (30%), Positives = 24/53 (45%)

Query: 130 PKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRREI 182
           P+ Q    P    NT   R+   PK H   +Q + T+   Q + KK  Q+R +
Sbjct: 87  PQYQMPMWPQPPPNTWHPRKSSAPKRHNKTDQTQETQKPNQTQSKKPPQKRPL 139


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 110 APLKPAKSARSVRAQRH---------TDMPKTQKYQPPSTNKNTKSQRRKGW-PKTHPGG 159
           AP  P  S   ++ +RH          + P     + P+T  ++KSQ+   W P   PGG
Sbjct: 347 APPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARSPTTELSSKSQQATAWTPTQQPGG 406

Query: 160 EQKEGT 165
           + + G+
Sbjct: 407 QLRNGS 412


>gi|23503297 protease, serine, 35 [Homo sapiens]
          Length = 413

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 141 NKNTKSQRR--KGWPKTHPGGEQKEGTEASLQIRGKKKEQRREIGSRNAECRGK 192
           NK+   +RR  K   +   GG+Q+EGT   LQ R K   +R++ G       G+
Sbjct: 193 NKSGGKKRRGSKRSRREASGGDQREGTREHLQERAKGGRRRKKSGRGQRIAEGR 246


>gi|5016090 nuclear receptor subfamily 0, group B, member 1 [Homo
           sapiens]
          Length = 470

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 16/103 (15%)

Query: 11  LFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVDALQFVCGDRG 70
           L++CCFC     + H    S + Y  L     T  A A PE   G            DR 
Sbjct: 129 LYRCCFCG----EDHPRQGS-ILYSLLTSSKQTHVAPAAPEARPGG--------AWWDRS 175

Query: 71  FYFNKPTGYGSSSRRAPQTGIVDECCFRSCD--LRRLEMYCAP 111
           ++  +P G   +      T ++  CCF   D   +   +YC P
Sbjct: 176 YFAQRPGG-KEALPGGRATALLYRCCFCGEDHPQQGSTLYCVP 217


>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
           3 [Homo sapiens]
          Length = 998

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 113 KPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIR 172
           +P K  +    +   D P + K+ P    KN    R    P+  P G+    T+   Q+ 
Sbjct: 510 QPEKRKQKPSPEPSQDSPHSDKWPPGHPVKNLPQMRG---PRPRPAGDSPRKTQWLNQVE 566

Query: 173 GKKKEQRR 180
               EQRR
Sbjct: 567 SYIAEQRR 574


>gi|21464119 methyl-CpG binding domain protein 1 isoform PCM1 [Homo
           sapiens]
          Length = 556

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 54  CGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSC---DLRRL----- 105
           CGA      +  CG   F  +KP   GS+ +R        +C +R C    ++RL     
Sbjct: 289 CGACAACLRRMDCGRCDFCCDKPKFGGSNQKR-------QKCRWRQCLQFAMKRLLPSVW 341

Query: 106 ----EMYCAPLKPAKSARSVRAQRHTDMP------KTQKYQPPSTNKNTKSQRRKGWPKT 155
               +   +P    +  R   A+RH   P       T+  QP  T   TK +   G+   
Sbjct: 342 SESEDGAGSPPPYRRRKRPSSARRHHLGPTLKPTLATRTAQPDHTQAPTKQEAGGGFVLP 401

Query: 156 HPGGE---QKEGTEASLQIRGKKKEQRREIGSRNAECRG 191
            PG +    +EG  + +Q+ G        +  + A+C G
Sbjct: 402 PPGTDLVFLREGASSPVQVPGPVAASTEAL-LQEAQCSG 439


>gi|21464117 methyl-CpG binding domain protein 1 isoform 1 [Homo
           sapiens]
          Length = 605

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 54  CGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSC---DLRRL----- 105
           CGA      +  CG   F  +KP   GS+ +R        +C +R C    ++RL     
Sbjct: 338 CGACAACLRRMDCGRCDFCCDKPKFGGSNQKR-------QKCRWRQCLQFAMKRLLPSVW 390

Query: 106 ----EMYCAPLKPAKSARSVRAQRHTDMP------KTQKYQPPSTNKNTKSQRRKGWPKT 155
               +   +P    +  R   A+RH   P       T+  QP  T   TK +   G+   
Sbjct: 391 SESEDGAGSPPPYRRRKRPSSARRHHLGPTLKPTLATRTAQPDHTQAPTKQEAGGGFVLP 450

Query: 156 HPGGE---QKEGTEASLQIRGKKKEQRREIGSRNAECRG 191
            PG +    +EG  + +Q+ G        +  + A+C G
Sbjct: 451 PPGTDLVFLREGASSPVQVPGPVAASTEAL-LQEAQCSG 488


>gi|223555917 metadherin [Homo sapiens]
          Length = 582

 Score = 28.1 bits (61), Expect = 4.9
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 15/84 (17%)

Query: 113 KPAKSARSVRAQR----HTDMPKTQKYQPPSTNKNTKSQRRKGWPKT----------HPG 158
           KP  + R+V         T    T K  P    KN KS++ K   K+          H G
Sbjct: 125 KPKPNGRTVEVAEGEAVRTPQSVTAKQPPEIDKKNEKSKKNKKKSKSDAKAVQNSSRHDG 184

Query: 159 GEQKEGT-EASLQIRGKKKEQRRE 181
            E  EG  E  +  R K+++++R+
Sbjct: 185 KEVDEGAWETKISHREKRQQRKRD 208


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,164,827
Number of Sequences: 37866
Number of extensions: 369525
Number of successful extensions: 1416
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1371
Number of HSP's gapped (non-prelim): 64
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.