Guide to the Human Genome
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Name: IGF2 Sequence: fasta or formatted (180aa) NCBI GI: 4504609
Description:

insulin-like growth factor 2 isoform 1 precursor

Referenced in:

Growth Hormone and Related Hormones
hnRNP
Pancreas and Insulin

Other entries for this name:
alt mRNA [180aa] insulin-like growth factor 2 isoform 1 precursor
alt prot [236aa] insulin-like growth factor 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         17           2
 C cysteine            4.4          8           2
 D aspartate           3.9          7           1
 E glutamate           5.6         10           2
 F phenylalanine       5.6         10           2
 G glycine             6.7         12           2
 H histidine           1.7          3           1
 I isoleucine          2.2          4           1
 K lysine              3.9          7           1
 L leucine            10.6         19           2
 M methionine          2.2          4           1
 N asparagine          1.1          2           1
 P proline             8.3         15           2
 Q glutamine           2.8          5           1
 R arginine           11.1         20           2
 S serine              6.7         12           1
 T threonine           5.6         10           1
 V valine              5.0          9           1
 W tryptophan          0.6          1           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor 2 isoform 1 precursor [Hom... 
IGF2                  1.000   insulin-like growth factor 2 isoform 1 precursor [H...
IGF2                  1.000   insulin-like growth factor 2 isoform 2 
IGF1                  0.198   insulin-like growth factor 1 isoform 4 preproprotein...
IGF1                  0.198   insulin-like growth factor 1 isoform 3 preproprotei...
IGF1                  0.198   insulin-like growth factor 1 isoform 2 preproprotei...
IGF1                  0.198   insulin-like growth factor 1 isoform 1 preproprotei...
INS                   0.078   proinsulin precursor 
INS-IGF2              0.040   insulin- insulin-like growth factor 2 
FREM3                 0.014   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.014   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.014   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
SLC10A7               0.011   solute carrier family 10 (sodium/bile acid cotranspo...
CSPG4                 0.009   chondroitin sulfate proteoglycan 4 
TSPAN5                0.009   transmembrane 4 superfamily member 9 
MAP7D1                0.009   MAP7 domain containing 1 
LOC729506             0.006   PREDICTED: hypothetical protein 
LOC100130563          0.006   PREDICTED: similar to CNOT4 protein, partial 
LOC729506             0.006   PREDICTED: hypothetical protein 
LOC100130563          0.006   PREDICTED: similar to CNOT4 protein, partial 
LOC729506             0.006   PREDICTED: hypothetical protein 
ARMC5                 0.006   armadillo repeat containing 5 isoform b 
ARMC5                 0.006   armadillo repeat containing 5 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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