Guide to the Human Genome
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Name: RLN1 Sequence: fasta or formatted (185aa) NCBI GI: 5902052
Description:

relaxin 1 preproprotein

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         15           2
 C cysteine            3.8          7           2
 D aspartate           3.8          7           2
 E glutamate           7.6         14           2
 F phenylalanine       4.9          9           1
 G glycine             2.2          4           1
 H histidine           1.1          2           1
 I isoleucine          5.9         11           3
 K lysine              8.1         15           2
 L leucine            13.5         25           3
 M methionine          1.6          3           1
 N asparagine          3.2          6           1
 P proline             6.5         12           2
 Q glutamine           4.9          9           2
 R arginine            6.5         12           2
 S serine              8.1         15           1
 T threonine           3.2          6           1
 V valine              3.8          7           1
 W tryptophan          1.1          2           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   relaxin 1 preproprotein 
RLN2                  0.816   relaxin 2 isoform 1 preproprotein 
RLN2                  0.300   relaxin 2 isoform 2 
INSL6                 0.086   insulin-like 6 precursor 
INSL4                 0.058   insulin-like 4 precursor 
RLN3                  0.035   relaxin 3 preproprotein 
LOC645971             0.029   PREDICTED: similar to hCG2036794 
LOC645971             0.029   PREDICTED: similar to hCG2036794 
LOC645971             0.029   PREDICTED: similar to hCG2036794 
INSL5                 0.020   insulin-like 5 precursor 
INSL3                 0.014   insulin-like 3 precursor 
CCHCR1                0.014   coiled-coil alpha-helical rod protein 1 isoform 1 [...
CCHCR1                0.014   coiled-coil alpha-helical rod protein 1 isoform 2 [...
CCHCR1                0.014   coiled-coil alpha-helical rod protein 1 isoform 3 [...
IL4R                  0.012   interleukin 4 receptor alpha chain isoform a precurso...
LOC100291808          0.012   PREDICTED: hypothetical protein XP_002345696 
LOC100287203          0.012   PREDICTED: hypothetical protein 
LOC100287203          0.012   PREDICTED: hypothetical protein XP_002342370 
KIAA1143              0.012   hypothetical protein LOC57456 
IGF1                  0.012   insulin-like growth factor 1 isoform 4 preproprotein...
IGF1                  0.012   insulin-like growth factor 1 isoform 3 preproprotei...
IGF1                  0.012   insulin-like growth factor 1 isoform 2 preproprotei...
IGF1                  0.012   insulin-like growth factor 1 isoform 1 preproprotei...
MYB                   0.009   v-myb myeloblastosis viral oncogene homolog isoform...
DST                   0.009   dystonin isoform 4 
DST                   0.009   dystonin isoform 3 
DST                   0.009   dystonin isoform 2 
DST                   0.009   dystonin isoform 1 
DST                   0.009   dystonin isoform 1eA precursor 
GMFG                  0.009   glia maturation factor, gamma 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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