VAX1 27333

Name: VAX1	Sequence: fasta or formatted (186aa)		NCBI GI: 40217622
Description: ventral anterior homeobox 1 isoform b		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [334aa] ventral anterior homeobox 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 18 2 C cysteine 2.2 4 1 D aspartate 5.9 11 1 E glutamate 9.7 18 2 F phenylalanine 3.2 6 1 G glycine 7.0 13 2 H histidine 1.1 2 1 I isoleucine 2.7 5 2 K lysine 10.2 19 3 L leucine 6.5 12 1 M methionine 1.6 3 1 N asparagine 4.8 9 2 P proline 4.3 8 1 Q glutamine 4.3 8 1 R arginine 11.3 21 2 S serine 8.1 15 1 T threonine 2.7 5 1 V valine 2.7 5 2 W tryptophan 0.5 1 1 Y tyrosine 1.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ventral anterior homeobox 1 isoform b VAX1 0.760 ventral anterior homeobox 1 isoform a VAX2 0.351 ventral anterior homeobox 2 EMX1 0.109 empty spiracles homolog 1 BARHL1 0.097 BarH-like homeobox 1 EMX2 0.091 empty spiracles homeobox 2 EN1 0.086 engrailed homeobox 1 MNX1 0.086 homeo box HB9 EVX2 0.083 even-skipped homeobox 2 EN2 0.083 engrailed homeobox 2 NKX1-1 0.074 PREDICTED: HPX-153 homeobox HOXA1 0.074 homeobox A1 isoform a GSX1 0.071 GS homeobox 1 NKX1-1 0.071 PREDICTED: NK1 homeobox 1 BSX 0.071 brain specific homeobox NKX1-1 0.069 PREDICTED: NK1 homeobox 1 HOXB4 0.069 homeobox B4 EVX1 0.069 even-skipped homeobox 1 HOXA4 0.063 homeobox A4 BARHL2 0.063 BarH-like homeobox 2 HOXA5 0.063 homeobox A5 NKX6-1 0.063 NK6 transcription factor related, locus 1 VENTX 0.063 VENT homeobox NKX3-2 0.063 NK3 homeobox 2 NKX1-2 0.063 NK1 homeobox 2 HMX3 0.063 H6 family homeobox 3 HOXC4 0.063 homeobox C4 HOXC4 0.063 homeobox C4 NKX1-2 0.063 PREDICTED: NK1 homeobox 2 NKX1-2 0.063 PREDICTED: NK1 homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.