Guide to the Human Genome
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Name: FBXO8 Sequence: fasta or formatted (319aa) NCBI GI: 48928044
Description:

F-box only protein 8

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         16           2
 C cysteine            2.5          8           1
 D aspartate           5.3         17           2
 E glutamate           6.3         20           2
 F phenylalanine       5.0         16           2
 G glycine             5.3         17           2
 H histidine           3.1         10           1
 I isoleucine          5.6         18           1
 K lysine              5.0         16           2
 L leucine            12.9         41           2
 M methionine          2.2          7           1
 N asparagine          6.6         21           1
 P proline             3.4         11           2
 Q glutamine           4.7         15           2
 R arginine            6.9         22           2
 S serine              6.6         21           1
 T threonine           4.1         13           1
 V valine              3.8         12           2
 W tryptophan          1.6          5           1
 Y tyrosine            4.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box only protein 8 
IQSEC2                0.130   IQ motif and Sec7 domain 2 isoform 2 
IQSEC2                0.130   IQ motif and Sec7 domain 2 isoform1 
IQSEC1                0.128   IQ motif and Sec7 domain 1 isoform a 
IQSEC1                0.128   IQ motif and Sec7 domain 1 isoform b 
IQSEC3                0.125   IQ motif and Sec7 domain 3 
ARFGEF1               0.111   brefeldin A-inhibited guanine nucleotide-exchange pr...
CYTH2                 0.107   cytohesin 2 isoform 2 
CYTH2                 0.107   cytohesin 2 isoform 1 
CYTH3                 0.101   cytohesin 3 
CYTH4                 0.100   cytohesin 4 
ARFGEF2               0.098   ADP-ribosylation factor guanine nucleotide-exchange...
CYTH1                 0.095   cytohesin 1 isoform 2 
CYTH1                 0.095   cytohesin 1 isoform 1 
PSD2                  0.051   pleckstrin and Sec7 domain containing 2 
GBF1                  0.049   golgi-specific brefeldin A resistant guanine nucleoti...
PSD3                  0.046   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.046   ADP-ribosylation factor guanine nucleotide factor 6...
PSD4                  0.044   pleckstrin and Sec7 domain containing 4 
FBXW7                 0.027   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.027   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.027   F-box and WD repeat domain containing 7 isoform 2 [H...
FBXO11                0.025   F-box only protein 11 isoform 1 
FBXO11                0.025   F-box only protein 11 isoform 2 
FBXO11                0.025   F-box only protein 11 isoform 3 
FBXL5                 0.021   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.021   F-box and leucine-rich repeat protein 5 isoform 1 [H...
FBXO48                0.019   F-box protein 48 
FBXO31                0.014   F-box protein 31 
FBXO15                0.014   F-box protein 15 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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