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Search of human proteins with 158634478
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|158634478 poly (ADP-ribose) polymerase family, member 3
isoform a [Homo sapiens]
(540 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|158634478 poly (ADP-ribose) polymerase family, member 3 isofo... 1105 0.0
gi|158634482 poly (ADP-ribose) polymerase family, member 3 isofo... 1093 0.0
gi|110825963 poly (ADP-ribose) polymerase family, member 2 isofo... 265 8e-71
gi|110825961 poly (ADP-ribose) polymerase family, member 2 isofo... 265 8e-71
gi|156523968 poly (ADP-ribose) polymerase family, member 1 [Homo... 244 1e-64
gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo... 79 1e-14
gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens] 41 0.002
gi|22749259 poly (ADP-ribose) polymerase family, member 15 isofo... 41 0.003
gi|165377137 poly (ADP-ribose) polymerase family, member 15 isof... 41 0.003
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 40 0.005
gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Hom... 40 0.005
gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 39 0.016
gi|221316588 biphenyl hydrolase-like [Homo sapiens] 35 0.13
gi|94536838 poly (ADP-ribose) polymerase family, member 6 [Homo ... 35 0.17
gi|194328777 poly (ADP-ribose) polymerase family, member 11 [Hom... 34 0.39
gi|222537714 taxilin beta [Homo sapiens] 33 0.86
gi|5901992 keratocan [Homo sapiens] 32 1.1
gi|24432009 poly (ADP-ribose) polymerase family, member 8 [Homo ... 32 1.1
gi|110611246 xylosyltransferase II [Homo sapiens] 30 4.3
gi|55770834 centromere protein F [Homo sapiens] 30 4.3
gi|156713448 selenocysteine lyase [Homo sapiens] 30 4.3
gi|14149740 oxysterol-binding protein-like protein 5 isoform a [... 30 5.6
gi|221136766 oxysterol-binding protein-like protein 5 isoform b ... 30 5.6
gi|22035609 oxysterol-binding protein-like protein 5 isoform b [... 30 5.6
gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens] 30 5.6
gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens] 30 5.6
gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens] 30 5.6
gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens] 30 5.6
gi|4759026 RAS protein activator like 1 [Homo sapiens] 30 7.3
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 30 7.3
>gi|158634478 poly (ADP-ribose) polymerase family, member 3 isoform
a [Homo sapiens]
Length = 540
Score = 1105 bits (2857), Expect = 0.0
Identities = 540/540 (100%), Positives = 540/540 (100%)
Query: 1 MSLLFLAMAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCP 60
MSLLFLAMAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCP
Sbjct: 1 MSLLFLAMAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCP 60
Query: 61 LSSNPGTQVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKIN 120
LSSNPGTQVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKIN
Sbjct: 61 LSSNPGTQVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKIN 120
Query: 121 HFTRLEDAKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPV 180
HFTRLEDAKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPV
Sbjct: 121 HFTRLEDAKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPV 180
Query: 181 RTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEAL 240
RTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEAL
Sbjct: 181 RTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEAL 240
Query: 241 EALEEALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIE 300
EALEEALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIE
Sbjct: 241 EALEEALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIE 300
Query: 301 LAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCP 360
LAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCP
Sbjct: 301 LAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCP 360
Query: 361 TLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGI 420
TLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGI
Sbjct: 361 TLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGI 420
Query: 421 YFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARG 480
YFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARG
Sbjct: 421 YFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARG 480
Query: 481 HTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL 540
HTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL
Sbjct: 481 HTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL 540
>gi|158634482 poly (ADP-ribose) polymerase family, member 3 isoform
b [Homo sapiens]
Length = 533
Score = 1093 bits (2826), Expect = 0.0
Identities = 533/533 (100%), Positives = 533/533 (100%)
Query: 8 MAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCPLSSNPGT 67
MAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCPLSSNPGT
Sbjct: 1 MAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCPLSSNPGT 60
Query: 68 QVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKINHFTRLED 127
QVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKINHFTRLED
Sbjct: 61 QVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKINHFTRLED 120
Query: 128 AKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRV 187
AKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRV
Sbjct: 121 AKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRV 180
Query: 188 QPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEAL 247
QPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEAL
Sbjct: 181 QPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEAL 240
Query: 248 KGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQA 307
KGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQA
Sbjct: 241 KGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQA 300
Query: 308 VSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCPTLQHIWK 367
VSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCPTLQHIWK
Sbjct: 301 VSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCPTLQHIWK 360
Query: 368 VNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGIYFASENS 427
VNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGIYFASENS
Sbjct: 361 VNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGIYFASENS 420
Query: 428 KSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPT 487
KSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPT
Sbjct: 421 KSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPT 480
Query: 488 QDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL 540
QDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL
Sbjct: 481 QDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL 533
>gi|110825963 poly (ADP-ribose) polymerase family, member 2 isoform
2 [Homo sapiens]
Length = 570
Score = 265 bits (677), Expect = 8e-71
Identities = 186/536 (34%), Positives = 290/536 (54%), Gaps = 38/536 (7%)
Query: 22 EKKKGRQAGREEDPFRSTA---EALKAIPAEKRIIRVDPTCPLSSNPGTQVYED---YNC 75
E KK AG + + R+ E++KA+ + + VDP C E Y+
Sbjct: 46 ESKKMPVAGGKANKDRTEDKQDESVKALLLKGKA-PVDPECTAKVGKAHVYCEGNDVYDV 104
Query: 76 TLNQTNIENNNNKFYIIQLLQD-SNRFFTCWNHWGRVGEVGQ-SKINHFTRLEDAKKDFE 133
LNQTN++ NNNK+Y+IQLL+D + R F+ W WGRVG++GQ S + L AK+ F+
Sbjct: 105 MLNQTNLQFNNNKYYLIQLLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQ 164
Query: 134 KKFREKTKNNWAERDHFVSHPGKYTLIEV----QAEDEAQEAVVKVDRGPVRTVTKRVQP 189
KKF +KTKNNW +R+ F PGKY ++++ +DE + + + P++ ++
Sbjct: 165 KKFLDKTKNNWEDREKFEKVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKPESQ---- 220
Query: 190 CSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKG 249
LD Q+LI I + + + M M + KK PLGKL+ QI G+++L+ +E+ ++
Sbjct: 221 --LDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRA 278
Query: 250 PTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQAVS 309
G++L E + FYT IPH+FG PP I + + L K +L L DIE+ A++ V
Sbjct: 279 -GQHGRALMEACNEFYTRIPHDFGLRTPPLIRTQKELSEKIQLLEALGDIEI--AIKLVK 335
Query: 310 EQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGS---NHRCPTLQHIW 366
+ ++ E HPLD+ Y+ L C L+ LD + E+KVI YL+ T + + TL ++
Sbjct: 336 TELQSPE---HPLDQHYRNLHCALRPLDHESYEFKVISQYLQSTHAPTHSDYTMTLLDLF 392
Query: 367 KVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPH----SGGRVGKGIYF 422
+V ++GE++ F+ L NR LLWHG+ M+ IL+ GLRI P +G GKGIYF
Sbjct: 393 EVEKDGEKEAFR--EDLHNRMLLWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYF 450
Query: 423 ASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHT 482
A +SKSA Y + + G + L EVALG+ + + NP + G S +G
Sbjct: 451 ADMSSKSANYCFASR--LKNTGLLLLSEVALGQCNELLEANPKAEGLLQGKHS--TKGLG 506
Query: 483 EPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEV 538
+ P+ + L+G V + T + +EY++Y +Q R+RYLL+V
Sbjct: 507 KMAPSSAHFVTLNGSTVPLGPASDTGILNPDGYTLNYNEYIVYNPNQVRMRYLLKV 562
>gi|110825961 poly (ADP-ribose) polymerase family, member 2 isoform
1 [Homo sapiens]
Length = 583
Score = 265 bits (677), Expect = 8e-71
Identities = 180/518 (34%), Positives = 283/518 (54%), Gaps = 35/518 (6%)
Query: 37 RSTAEALKAIPAEKRIIRVDPTCPLSSNPGTQVYED---YNCTLNQTNIENNNNKFYIIQ 93
+ +E++KA+ + + VDP C E Y+ LNQTN++ NNNK+Y+IQ
Sbjct: 77 KRVSESVKALLLKGKA-PVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQ 135
Query: 94 LLQD-SNRFFTCWNHWGRVGEVGQ-SKINHFTRLEDAKKDFEKKFREKTKNNWAERDHFV 151
LL+D + R F+ W WGRVG++GQ S + L AK+ F+KKF +KTKNNW +R+ F
Sbjct: 136 LLEDDAQRNFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQKKFLDKTKNNWEDREKFE 195
Query: 152 SHPGKYTLIEV----QAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKE 207
PGKY ++++ +DE + + + P++ ++ LD Q+LI I + +
Sbjct: 196 KVPGKYDMLQMDYATNTQDEEETKKEESLKSPLKPESQ------LDLRVQELIKLICNVQ 249
Query: 208 MFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGGQSLEELSSHFYTV 267
+ M M + KK PLGKL+ QI G+++L+ +E+ ++ G++L E + FYT
Sbjct: 250 AMEEMMMEMKYNTKKAPLGKLTVAQIKAGYQSLKKIEDCIRA-GQHGRALMEACNEFYTR 308
Query: 268 IPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQ 327
IPH+FG PP I + + L K +L L DIE+ A++ V + ++ E HPLD+ Y+
Sbjct: 309 IPHDFGLRTPPLIRTQKELSEKIQLLEALGDIEI--AIKLVKTELQSPE---HPLDQHYR 363
Query: 328 LLKCQLQLLDSGAPEYKVIQTYLEQTGS---NHRCPTLQHIWKVNQEGEEDRFQAHSKLG 384
L C L+ LD + E+KVI YL+ T + + TL +++V ++GE++ F+ L
Sbjct: 364 NLHCALRPLDHESYEFKVISQYLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAFR--EDLH 421
Query: 385 NRKLLWHGTNMAVVAAILTSGLRIMPH----SGGRVGKGIYFASENSKSAGYVIGMKCGA 440
NR LLWHG+ M+ IL+ GLRI P +G GKGIYFA +SKSA Y +
Sbjct: 422 NRMLLWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYFADMSSKSANYCFASR--L 479
Query: 441 HHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVV 500
+ G + L EVALG+ + + NP + G S +G + P+ + L+G V
Sbjct: 480 KNTGLLLLSEVALGQCNELLEANPKAEGLLQGKHS--TKGLGKMAPSSAHFVTLNGSTVP 537
Query: 501 VPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEV 538
+ T + +EY++Y +Q R+RYLL+V
Sbjct: 538 LGPASDTGILNPDGYTLNYNEYIVYNPNQVRMRYLLKV 575
>gi|156523968 poly (ADP-ribose) polymerase family, member 1 [Homo
sapiens]
Length = 1014
Score = 244 bits (623), Expect = 1e-64
Identities = 168/476 (35%), Positives = 263/476 (55%), Gaps = 33/476 (6%)
Query: 73 YNCTLNQTNIENNNNKFYIIQLLQDS--NRFFTCWNHWGRVGEV-GQSKINHFTRLEDAK 129
++ TL +I N +Y +QLL+D NR++ + WGRVG V G +K+ EDA
Sbjct: 553 FSATLGLVDIVKGTNSYYKLQLLEDDKENRYWI-FRSWGRVGTVIGSNKLEQMPSKEDAI 611
Query: 130 KDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRVQP 189
+ F K + EKT N W ++ F +P K+ +E+ + +EAV K+ P T +K +P
Sbjct: 612 EHFMKLYEEKTGNAWHSKN-FTKYPKKFYPLEIDYGQD-EEAVKKLTVNP-GTKSKLPKP 668
Query: 190 CSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKG 249
Q LI IF E K M ++D++KMPLGKLSK+QI + L +++A+
Sbjct: 669 ------VQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQ 722
Query: 250 PTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQAVS 309
+ Q L+ LS+ FYT+IPH+FG +PP +N+ + +QAK +ML L DIE+A +L
Sbjct: 723 GSSDSQILD-LSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYSLLRGG 781
Query: 310 EQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQT-GSNHRCPTLQ--HIW 366
+ + + P+D +Y+ LK ++++D + E ++I+ Y++ T + H L+ I+
Sbjct: 782 SDDSSKD----PIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIF 837
Query: 367 KVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPH----SGGRVGKGIYF 422
K+ +EGE R++ +L NR+LLWHG+ A IL+ GLRI P +G GKGIYF
Sbjct: 838 KIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYF 897
Query: 423 ASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHT 482
A SKSA Y + +G + LGEVALG + + + + P G SV G T
Sbjct: 898 ADMVSKSANYCHTSQ--GDPIGLILLGEVALGNMYELKHAS-HISKLPKGKHSVKGLGKT 954
Query: 483 EPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEV 538
PDP+ + LDG V VP G + + ++ +EY++Y +Q L+YLL++
Sbjct: 955 TPDPS--ANISLDG--VDVPLGTGI-SSGVNDTSLLYNEYIVYDIAQVNLKYLLKL 1005
>gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo
sapiens]
Length = 1724
Score = 79.0 bits (193), Expect = 1e-14
Identities = 88/421 (20%), Positives = 174/421 (41%), Gaps = 75/421 (17%)
Query: 126 EDAKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTK 185
EDA + FE E K + R+HF + ++QA + +
Sbjct: 209 EDASEYFENYIEELKKQGFLLREHFTPEATQLASEQLQA----------------LLLEE 252
Query: 186 RVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEE 245
+ +L L+ I+++ + L+ P+ ++S +++ L ++
Sbjct: 253 VMNSSTLSQEVSDLVEMIWAEALGHLEHMLLK------PVNRISLNDVSKAEGILLLVKA 306
Query: 246 ALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQAL 305
ALK + + L+++ + FY +IPH + P +N LL K D+ ++ D+
Sbjct: 307 ALKNG-ETAEQLQKMMTEFYRLIPHK--GTMPKEVNLG-LLAKKADLCQLIRDM------ 356
Query: 306 QAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRCPTLQHI 365
V+ E + + P Y+ L+C+++ ++ E+ ++ + Q + + I
Sbjct: 357 --VNVCETNLSKPNPPSLAKYRALRCKIEHVEQNTEEFLRVRKEVLQNHHSKSPVDVLQI 414
Query: 366 WKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGL---RIMPHSG------GRV 416
++V + E F SKLGN + L HG+ + + IL GL +++ G G +
Sbjct: 415 FRVGRVNETTEFL--SKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNL 472
Query: 417 GKGIYFASENSKSAGYVIGMKCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSV 476
G GIYF+ S S Y + + + + +VALG+ ++ + SL PPG+DSV
Sbjct: 473 GSGIYFSDSLSTSIKYSHPGETDGTRL--LLICDVALGKCMDLHEKDFSLTEAPPGYDSV 530
Query: 477 IARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLL 536
T T F E+++Y+ +Q +++Y++
Sbjct: 531 HGVSQTASVTTD----------------------------FEDDEFVVYKTNQVKMKYII 562
Query: 537 E 537
+
Sbjct: 563 K 563
>gi|27477136 zinc finger antiviral protein isoform 1 [Homo sapiens]
Length = 902
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 36/152 (23%)
Query: 341 PEYKVIQTYLEQTGSNHRCPTLQHI----------WKVNQEGEEDRFQAHSKLGNRKLLW 390
PEY + + + + N + ++ I WK +Q EE KLL+
Sbjct: 738 PEYVRVSEHFKASMKNFKIEKIKKIENSELLDKFTWKKSQMKEEG-----------KLLF 786
Query: 391 HGTNMAVVAAILTSGLRIMPHSG--GRVGKGIYFASE---NSKSAGYVIGMKCGAHHVGY 445
+ T+ A V +I ++ H + GKGIYFA + + K+ Y A +V
Sbjct: 787 YATSRAYVESICSNNFDSFLHETHENKYGKGIYFAKDAIYSHKNCPY------DAKNV-V 839
Query: 446 MFLGEVALGREHHINTDNPSLKSPPPGFDSVI 477
MF+ +V +G+ N + SPPP FDS +
Sbjct: 840 MFVAQVLVGK---FTEGNITYTSPPPQFDSCV 868
>gi|22749259 poly (ADP-ribose) polymerase family, member 15 isoform
2 [Homo sapiens]
Length = 444
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 280 INSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVP-HPLDRDYQLLKCQLQLLDS 338
I PELL D + +L+ +L S T +P H D ++QL C +QL +
Sbjct: 213 IFQPELLNIFYDSM---KKRDLSASLNFQSTFSMTTCNLPEHWTDMNHQLF-CMVQL-EP 267
Query: 339 GAPEYKVIQTYLEQTGSNHRCPTLQHI-----WKVNQEGEEDRFQAHSKLGNRKLLWHGT 393
G EY I+ +T S++ ++ I W+ Q + + N +LL+HGT
Sbjct: 268 GQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFHGT 327
Query: 394 NMAVVAAILTSGLRIMPHSGGRV--GKGIYFASENSKSA 430
+ V + G V GKG YFA + S SA
Sbjct: 328 DADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSA 366
>gi|165377137 poly (ADP-ribose) polymerase family, member 15 isoform
1 [Homo sapiens]
Length = 678
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 280 INSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVP-HPLDRDYQLLKCQLQLLDS 338
I PELL D + +L+ +L S T +P H D ++QL C +QL +
Sbjct: 447 IFQPELLNIFYDSM---KKRDLSASLNFQSTFSMTTCNLPEHWTDMNHQLF-CMVQL-EP 501
Query: 339 GAPEYKVIQTYLEQTGSNHRCPTLQHI-----WKVNQEGEEDRFQAHSKLGNRKLLWHGT 393
G EY I+ +T S++ ++ I W+ Q + + N +LL+HGT
Sbjct: 502 GQSEYNTIKDKFTRTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFHGT 561
Query: 394 NMAVVAAILTSGLRIMPHSGGRV--GKGIYFASENSKSA 430
+ V + G V GKG YFA + S SA
Sbjct: 562 DADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSA 600
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 385 NRKLLWHGTNMAVVAAILTSGL-RIMPHSGGRVGKGIYFASENSKSAGYVIGM------- 436
N ++L+HG+ + AI+ G + GG G GIYFA +SKS YV G+
Sbjct: 1178 NERMLFHGSPF--INAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCP 1235
Query: 437 -----KCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIAR 479
C H +F V LG+ + + PPG SVI R
Sbjct: 1236 THKDRSCYICHRQMLFC-RVTLGKS-FLQFSTMKMAHAPPGHHSVIGR 1281
>gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Homo
sapiens]
Length = 1801
Score = 40.0 bits (92), Expect = 0.005
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 14/163 (8%)
Query: 331 CQLQLLDSGAPEYKVIQTYLEQTGSNHRCPTLQHI-----WKVNQEGEEDRFQAHSKLGN 385
C ++LL S PEY + + QT S+ R ++ I W Q ++ + + N
Sbjct: 1618 CVVELLPSD-PEYNTVASKFNQTCSHFRIEKIERIQNPDLWNSYQAKKKTMDAKNGQTMN 1676
Query: 386 RKLLWHGTNMAVVAAILTSGLRIMPHSGGRV---GKGIYFASENSKSAG--YVIGMKCGA 440
K L+HGT+ V + +G ++G GKG YFA + SA Y G
Sbjct: 1677 EKQLFHGTDAGSVPHVNRNGFN-RSYAGKNAVAYGKGTYFAVNANYSANDTYSRPDANGR 1735
Query: 441 HHVGY--MFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGH 481
HV Y + G G I + + ++P +D+V H
Sbjct: 1736 KHVYYVRVLTGIYTHGNHSLIVPPSKNPQNPTDLYDTVTDNVH 1778
>gi|13376842 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase 2 [Homo sapiens]
Length = 1166
Score = 38.5 bits (88), Expect = 0.016
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 17/128 (13%)
Query: 365 IWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGL-RIMPHSGGRVGKGIYFA 423
+W+ ++ + + N ++L+HG+ V AI+ G + GG G GIYFA
Sbjct: 1005 LWERYTHRRKEVSEENHNHANERMLFHGSPF--VNAIIHKGFDERHAYIGGMFGAGIYFA 1062
Query: 424 SENSKSAGYVIGM------------KCGAHHVGYMFLGEVALGREHHINTDNPSLKSPPP 471
+SKS YV G+ C H +F V LG+ + + PP
Sbjct: 1063 ENSSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFC-RVTLGKS-FLQFSAMKMAHSPP 1120
Query: 472 GFDSVIAR 479
G SV R
Sbjct: 1121 GHHSVTGR 1128
>gi|221316588 biphenyl hydrolase-like [Homo sapiens]
Length = 291
Score = 35.4 bits (80), Expect = 0.13
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 227 KLSKQQIARGFEALEALEEAL-KGPTDGGQSLEELSSHFYTVI---PHNFGHSQPPPINS 282
+L QQ G A+ L L G TD G L+ L+ +TV+ P +GHS+PP +
Sbjct: 50 QLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDF 109
Query: 283 P 283
P
Sbjct: 110 P 110
>gi|94536838 poly (ADP-ribose) polymerase family, member 6 [Homo
sapiens]
Length = 630
Score = 35.0 bits (79), Expect = 0.17
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 278 PPINSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLD 337
P + E LQ D ++ + ++ L+ + +K ++ + HPL LQ +
Sbjct: 374 PKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDK-LDPLAHPL----------LQWII 422
Query: 338 SGAPEYKVIQTYLEQTGSNHRCPTLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAV 397
S + +++ L + H + Q + + +E RF+ KL +HG+++
Sbjct: 423 SSNRSH-IVKLPLSRLKFMHT--SHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIEN 479
Query: 398 VAAILTSGL------RIMPHSGGRVGKGIYFASENSKSAGYVIGMKCGAHHV 443
+IL +GL ++ H G GKGIY + +S S GY GM G H +
Sbjct: 480 WHSILRNGLVNASYTKLQLH-GAAYGKGIYLSPISSISFGY-SGMGKGQHRM 529
>gi|194328777 poly (ADP-ribose) polymerase family, member 11 [Homo
sapiens]
Length = 338
Score = 33.9 bits (76), Expect = 0.39
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 332 QLQLLDSGAPEYKVIQTYLEQTGSNHRCPTLQHIWKVN--QEGEEDRFQAHSKLG----N 385
QL L + EY + +T +R +Q I ++ + + Q K G N
Sbjct: 139 QLIPLHNQTHEYNEVANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQIN 198
Query: 386 RKLLWHGTNMAVVAAILTSGL--RIMPHSGGRVGKGIYFASENSKSAGY----------- 432
++L+HGT+ V AI RI G GKG YFA + + S+ +
Sbjct: 199 EQMLFHGTSSEFVEAICIHNFDWRINGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTF 258
Query: 433 -VIGMKCGAHHV----GYMFLGEVALGREHHINTDNPSLKSP 469
+ G+ H+ MFL V +G +IN D+ ++ P
Sbjct: 259 QIHGVSLQQRHLFRTYKSMFLARVLIG--DYINGDSKYMRPP 298
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 32.7 bits (73), Expect = 0.86
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 244 EEALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQ 303
EEAL+ + + +E++SHF + + G + Q++++M L + ELA+
Sbjct: 230 EEALQRAREEEEKRKEITSHFQSTLTDIQGQIEQ---------QSERNMKLCQENTELAE 280
Query: 304 ALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDS 338
L+++ +Q + EE LD+ ++ + Q +L+D+
Sbjct: 281 KLKSIIDQYELREE---HLDKIFKHRELQQKLVDA 312
>gi|5901992 keratocan [Homo sapiens]
Length = 352
Score = 32.3 bits (72), Expect = 1.1
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 166 DEAQEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPL 225
++ Q A KV R P T + LD KL+ N F ++ FK LM L++ K L
Sbjct: 145 EQLQLARNKVSRIPQGTFSNLENLTLLDLQNNKLVDNAFQRDTFKGLKNLMQLNMAKNAL 204
Query: 226 GKLSKQQIARGFEALEALEEALKGPTDGGQSLEELSSHFYTVIP 269
+ + A + S+E + +++ VIP
Sbjct: 205 RNMPPRLPANTMQLFL-----------DNNSIEGIPENYFNVIP 237
>gi|24432009 poly (ADP-ribose) polymerase family, member 8 [Homo
sapiens]
Length = 854
Score = 32.3 bits (72), Expect = 1.1
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 373 EEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHS-----GGRVGKGIYFASENS 427
+E F+A KL +HG+++ +IL +GL + ++ G G GIY + +S
Sbjct: 679 KESNFRAAKKLFGSTFAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSS 738
Query: 428 KSAGY 432
S GY
Sbjct: 739 ISFGY 743
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 30.4 bits (67), Expect = 4.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 23 KKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCPLSSNPGTQ 68
++ GR GR E P A+ ++A+ + +R R P P PG Q
Sbjct: 76 RRHGRWRGRAESPGVPVAKVVRAVTSRQRASRRVPPAPPPEAPGRQ 121
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 30.4 bits (67), Expect = 4.3
Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 37/266 (13%)
Query: 116 QSKINHFTR-LEDAKKDFEKKFRE--KTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAV 172
QS +N + +ED K+ EKK E + KN +++ VS L +V+ E + +
Sbjct: 2500 QSSVNGLIQEVEDGKQKLEKKDEEISRLKNQIQDQEQLVSK-----LSQVEGEHQ----L 2550
Query: 173 VKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVK----KMPLGKL 228
K +R +T ++ QK+ ++T+ ++ K ++ L K+
Sbjct: 2551 WKEQNLELRNLTVELE--------QKIQVLQSKNASLQDTLEVLQSSYKNLENELELTKM 2602
Query: 229 SKQQIARGFEALEALEEALKGPT-DGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQ 287
K + A E L+ + Q EL G Q E ++
Sbjct: 2603 DKMSFVEKVNKMTAKETELQREMHEMAQKTAELQEELSGEKNRLAGELQL----LLEEIK 2658
Query: 288 AKKDML--LVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLL------KCQLQLLDSG 339
+ KD L L L + EL ++L + + + E +YQL K Q LLD+
Sbjct: 2659 SSKDQLKELTLENSELKKSLDCMHKDQVEKEGKVREEIAEYQLRLHEAEKKHQALLLDTN 2718
Query: 340 APEYKVIQTYLEQTGSNHRCPTLQHI 365
IQTY E+ S C + Q +
Sbjct: 2719 KQYEVEIQTYREKLTSKEECLSSQKL 2744
>gi|156713448 selenocysteine lyase [Homo sapiens]
Length = 445
Score = 30.4 bits (67), Expect = 4.3
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 147 RDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPA---TQKLITNI 203
+ HF++ ++ I + E +E V V PV V+ + + + A T +L+T +
Sbjct: 135 KPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQAEVDDILAAVRPTTRLVTIM 194
Query: 204 FSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGGQSLEELSSH 263
+ T +M + + L+++++A G + +A + +E+L
Sbjct: 195 LANN---ETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVD 251
Query: 264 FYTVIPHNF 272
F T++ H F
Sbjct: 252 FLTIVGHKF 260
>gi|14149740 oxysterol-binding protein-like protein 5 isoform a
[Homo sapiens]
Length = 879
Score = 30.0 bits (66), Expect = 5.6
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 340 APEYKVIQTYLEQTGSNHRCPTLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVA 399
A +Y + Y G + TL+ KV E ++ FQA + + T++ ++
Sbjct: 527 AEDYTLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQAQLEFKLKPFFGGSTSINQIS 586
Query: 400 AILTSGLRIMPHSGGRVGKGIYFASENSKSA 430
+TSG ++ G + ++ E S S+
Sbjct: 587 GKITSGEEVLASLSGHWDRDVFIKEEGSGSS 617
>gi|221136766 oxysterol-binding protein-like protein 5 isoform b
[Homo sapiens]
Length = 811
Score = 30.0 bits (66), Expect = 5.6
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 340 APEYKVIQTYLEQTGSNHRCPTLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVA 399
A +Y + Y G + TL+ KV E ++ FQA + + T++ ++
Sbjct: 459 AEDYTLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQAQLEFKLKPFFGGSTSINQIS 518
Query: 400 AILTSGLRIMPHSGGRVGKGIYFASENSKSA 430
+TSG ++ G + ++ E S S+
Sbjct: 519 GKITSGEEVLASLSGHWDRDVFIKEEGSGSS 549
>gi|22035609 oxysterol-binding protein-like protein 5 isoform b
[Homo sapiens]
Length = 811
Score = 30.0 bits (66), Expect = 5.6
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 340 APEYKVIQTYLEQTGSNHRCPTLQHIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVA 399
A +Y + Y G + TL+ KV E ++ FQA + + T++ ++
Sbjct: 459 AEDYTLTMPYAHCKGILYGTMTLELGGKVTIECAKNNFQAQLEFKLKPFFGGSTSINQIS 518
Query: 400 AILTSGLRIMPHSGGRVGKGIYFASENSKSA 430
+TSG ++ G + ++ E S S+
Sbjct: 519 GKITSGEEVLASLSGHWDRDVFIKEEGSGSS 549
>gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]
Length = 1156
Score = 30.0 bits (66), Expect = 5.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 455 REHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSS 514
R+ HI ++P + PP + G EPDP T +L G + P PV CP S
Sbjct: 783 RKAHILKNHPGAELPP-SIRKLRPAGPGEPDPMLSTHTQLTG-TIATP---PVCCPHCSK 837
Query: 515 STFSQSE 521
S+++
Sbjct: 838 QYSSKTK 844
>gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens]
Length = 1023
Score = 30.0 bits (66), Expect = 5.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 455 REHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSS 514
R+ HI ++P + PP + G EPDP T +L G + P PV CP S
Sbjct: 697 RKAHILKNHPGAELPP-SIRKLRPAGPGEPDPMLSTHTQLTG-TIATP---PVCCPHCSK 751
Query: 515 STFSQSE 521
S+++
Sbjct: 752 QYSSKTK 758
>gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]
Length = 1160
Score = 30.0 bits (66), Expect = 5.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 455 REHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSS 514
R+ HI ++P + PP + G EPDP T +L G + P PV CP S
Sbjct: 787 RKAHILKNHPGAELPP-SIRKLRPAGPGEPDPMLSTHTQLTG-TIATP---PVCCPHCSK 841
Query: 515 STFSQSE 521
S+++
Sbjct: 842 QYSSKTK 848
>gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens]
Length = 1061
Score = 30.0 bits (66), Expect = 5.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 455 REHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSS 514
R+ HI ++P + PP + G EPDP T +L G + P PV CP S
Sbjct: 701 RKAHILKNHPGAELPP-SIRKLRPAGPGEPDPMLSTHTQLTG-TIATP---PVCCPHCSK 755
Query: 515 STFSQSE 521
S+++
Sbjct: 756 QYSSKTK 762
>gi|4759026 RAS protein activator like 1 [Homo sapiens]
Length = 804
Score = 29.6 bits (65), Expect = 7.3
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 432 YVIGMKCGAHHVGYMFLGEVALGREH---HINTDNPSLKSPPPGFDSVIARGHTEPDPTQ 488
Y + + H + + L E +G + I+ ++ + P G DS I +PD
Sbjct: 57 YTVHLPLDFHQLAFYVLDEDTVGHDDIIGKISLSREAITADPRGIDSWINLSRVDPDAEV 116
Query: 489 DTELELDGQQVVVPQGQPVPC 509
E+ L Q + QG+ + C
Sbjct: 117 QGEICLSVQMLEDGQGRCLRC 137
>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 29.6 bits (65), Expect = 7.3
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 210 KNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGGQSLEELS------SH 263
+ T L+ D +P G L A A A A P GQ L+ + +
Sbjct: 212 RKTKTLLKKDKYSLPSGLLPPGAAAAA-AAAAAAAAAASSPVGVGQRLDTYTHVNGWANG 270
Query: 264 FYTVIPHNFGHSQPPPINSP 283
Y+++ G++QPP ++SP
Sbjct: 271 AYSLVQEQLGYAQPPSMSSP 290
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,925,046
Number of Sequences: 37866
Number of extensions: 1130653
Number of successful extensions: 3372
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3317
Number of HSP's gapped (non-prelim): 50
length of query: 540
length of database: 18,247,518
effective HSP length: 107
effective length of query: 433
effective length of database: 14,195,856
effective search space: 6146805648
effective search space used: 6146805648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.