Guide to the Human Genome
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Name: OSBPL5 Sequence: fasta or formatted (811aa) NCBI GI: 22035609
Description:

oxysterol-binding protein-like protein 5 isoform b

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [879aa] oxysterol-binding protein-like protein 5 isoform a
alt mRNA [811aa] oxysterol-binding protein-like protein 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         53           2
 C cysteine            2.1         17           2
 D aspartate           4.8         39           1
 E glutamate           8.5         69           2
 F phenylalanine       3.6         29           2
 G glycine             6.3         51           2
 H histidine           2.6         21           2
 I isoleucine          2.7         22           1
 K lysine              5.3         43           2
 L leucine            10.7         87           3
 M methionine          1.2         10           1
 N asparagine          2.2         18           2
 P proline             7.3         59           2
 Q glutamine           5.3         43           2
 R arginine            7.2         58           3
 S serine             10.4         84           2
 T threonine           5.9         48           2
 V valine              3.7         30           2
 W tryptophan          1.4         11           1
 Y tyrosine            2.3         19           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol-binding protein-like protein 5 isoform b [... 
OSBPL5                1.000   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.836   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL8                0.430   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.430   oxysterol-binding protein-like protein 8 isoform a [...
OSBPL9                0.121   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.121   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.121   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.121   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.121   oxysterol binding protein-like 9 isoform b 
OSBPL9                0.121   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.121   oxysterol binding protein-like 9 isoform a 
OSBPL11               0.119   oxysterol binding protein-like 11 
OSBPL10               0.118   oxysterol-binding protein-like protein 10 
OSBPL1A               0.070   oxysterol-binding protein-like 1A isoform A 
OSBPL1A               0.070   oxysterol-binding protein-like 1A isoform B 
OSBPL2                0.067   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.067   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBPL6                0.055   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.055   oxysterol-binding protein-like protein 6 isoform a [...
OSBPL3                0.050   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL3                0.050   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.050   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.050   oxysterol-binding protein-like protein 3 isoform a [...
OSBP2                 0.048   oxysterol binding protein 2 isoform a 
OSBP                  0.047   oxysterol binding protein 
OSBPL7                0.044   oxysterol-binding protein-like protein 7 
PELP1                 0.007   proline, glutamic acid and leucine rich protein 1 [...
LIG1                  0.007   DNA ligase I 
BRD2                  0.007   bromodomain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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