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Search of human proteins with 157739864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
(1302 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens] 2589 0.0
gi|38327034 ubiquitination factor E4B isoform 2 [Homo sapiens] 1820 0.0
gi|38327029 ubiquitination factor E4A [Homo sapiens] 277 5e-74
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 60 2e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 3e-08
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 59 4e-08
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 56 2e-07
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 54 1e-06
gi|91982772 mucin 17 [Homo sapiens] 54 1e-06
gi|149408144 TOX high mobility group box family member 2 isoform... 53 2e-06
gi|149408141 TOX high mobility group box family member 2 isoform... 53 2e-06
gi|14249636 TOX high mobility group box family member 2 isoform ... 53 2e-06
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 53 2e-06
gi|33946327 nucleoporin 214kDa [Homo sapiens] 52 5e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 52 5e-06
gi|24430146 nucleoporin 153kDa [Homo sapiens] 51 6e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 6e-06
gi|91208420 bassoon protein [Homo sapiens] 51 6e-06
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 51 8e-06
gi|151301154 mucin 6, gastric [Homo sapiens] 50 1e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 50 1e-05
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 50 2e-05
gi|42476164 POU class 2 homeobox 1 [Homo sapiens] 49 3e-05
gi|134244285 Notch homolog 3 [Homo sapiens] 49 3e-05
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 49 4e-05
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 49 4e-05
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 49 4e-05
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 48 5e-05
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 48 7e-05
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 48 7e-05
>gi|157739864 ubiquitination factor E4B isoform 1 [Homo sapiens]
Length = 1302
Score = 2589 bits (6711), Expect = 0.0
Identities = 1302/1302 (100%), Positives = 1302/1302 (100%)
Query: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
Sbjct: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
Query: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
Sbjct: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
Query: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
Sbjct: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
Query: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
Sbjct: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
Query: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAA 300
RNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAA
Sbjct: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAA 300
Query: 301 SQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSP 360
SQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSP
Sbjct: 301 SQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSP 360
Query: 361 QAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHFTIET 420
QAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHFTIET
Sbjct: 361 QAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHFTIET 420
Query: 421 CKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPR 480
CKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPR
Sbjct: 421 CKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPR 480
Query: 481 SLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDY 540
SLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDY
Sbjct: 481 SLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDY 540
Query: 541 FKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVF 600
FKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVF
Sbjct: 541 FKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVF 600
Query: 601 AEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSY 660
AEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSY
Sbjct: 601 AEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSY 660
Query: 661 MAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITL 720
MAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITL
Sbjct: 661 MAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITL 720
Query: 721 PNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRL 780
PNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRL
Sbjct: 721 PNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRL 780
Query: 781 RAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFL 840
RAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFL
Sbjct: 781 RAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFL 840
Query: 841 RRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSP 900
RRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSP
Sbjct: 841 RRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSP 900
Query: 901 QALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHP 960
QALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHP
Sbjct: 901 QALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHP 960
Query: 961 LSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSG 1020
LSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSG
Sbjct: 961 LSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSG 1020
Query: 1021 KQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDE 1080
KQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDE
Sbjct: 1021 KQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDE 1080
Query: 1081 RVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVEN 1140
RVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVEN
Sbjct: 1081 RVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVEN 1140
Query: 1141 PEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIA 1200
PEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIA
Sbjct: 1141 PEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIA 1200
Query: 1201 IEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILR 1260
IEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILR
Sbjct: 1201 IEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILR 1260
Query: 1261 HLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1302
HLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH
Sbjct: 1261 HLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1302
>gi|38327034 ubiquitination factor E4B isoform 2 [Homo sapiens]
Length = 1173
Score = 1820 bits (4714), Expect = 0.0
Identities = 919/948 (96%), Positives = 920/948 (97%), Gaps = 6/948 (0%)
Query: 358 SSPQAVPASS-SRQRPSSTG--PPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSD 414
S P A A S R +TG P P S S SSL SLGASGGASNWDSYSD
Sbjct: 229 SQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLS---SLGASGGASNWDSYSD 285
Query: 415 HFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQG 474
HFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQG
Sbjct: 286 HFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQG 345
Query: 475 SLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKEC 534
SLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKEC
Sbjct: 346 SLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKEC 405
Query: 535 SLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAF 594
SLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAF
Sbjct: 406 SLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAF 465
Query: 595 FSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETR 654
FSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETR
Sbjct: 466 FSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETR 525
Query: 655 EAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHP 714
EAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHP
Sbjct: 526 EAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHP 585
Query: 715 RCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCR 774
RCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCR
Sbjct: 586 RCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCR 645
Query: 775 RYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGL 834
RYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGL
Sbjct: 646 RYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGL 705
Query: 835 LDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFF 894
LDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFF
Sbjct: 706 LDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFF 765
Query: 895 IVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFE 954
IVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFE
Sbjct: 766 IVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFE 825
Query: 955 MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFM 1014
MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFM
Sbjct: 826 MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFM 885
Query: 1015 EEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQS 1074
EEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQS
Sbjct: 886 EEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQS 945
Query: 1075 QLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCR 1134
QLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCR
Sbjct: 946 QLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCR 1005
Query: 1135 DLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAG 1194
DLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAG
Sbjct: 1006 DLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAG 1065
Query: 1195 IKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMD 1254
IKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMD
Sbjct: 1066 IKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMD 1125
Query: 1255 RSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1302
RSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH
Sbjct: 1126 RSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1173
Score = 527 bits (1357), Expect = e-149
Identities = 276/285 (96%), Positives = 276/285 (96%), Gaps = 3/285 (1%)
Query: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
Sbjct: 1 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 60
Query: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
Sbjct: 61 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 120
Query: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
Sbjct: 121 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 180
Query: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
Sbjct: 181 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 240
Query: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSS 285
RNLLLNTGSNPGTSPMFCSVASFGASSLSSL S A S W S
Sbjct: 241 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGA---SNWDS 282
>gi|38327029 ubiquitination factor E4A [Homo sapiens]
Length = 1073
Score = 277 bits (708), Expect = 5e-74
Identities = 246/931 (26%), Positives = 434/931 (46%), Gaps = 89/931 (9%)
Query: 423 ETDMLNYLIECFDRVGIEEKKAPKMCSQPAV---SQLLSNIRSQCISHTALVLQGSLTQP 479
E + YL CF R E K P+ AV + +SN R+ ++ V Q Q
Sbjct: 170 ERHIFCYLYSCFQRAKEEITKVPENLLPFAVQCRNLTVSNTRTVLLTPEIYVDQNIHEQL 229
Query: 480 RSLQQPSFLVPYMLCRNLPYG----FIQELVRTTHQDEEV--FKQIFIPILQGLALAAKE 533
L + + + F++E++ DEEV F ++ IP+ L K+
Sbjct: 230 VDLMLEAIQGAREYMNKIYFEDVTEFLEEVIEALILDEEVRTFPEVMIPVFDILLGRIKD 289
Query: 534 CSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGA 593
L L L K +A + + + P G+ Q+ + LG
Sbjct: 290 LELCQILLYAYLDILLYFTRQKD---------MAKVFVEYIQPKDPTNGQMYQK-TLLGV 339
Query: 594 FFSFSVFAEDDVKVVEK--YFSGPAITL-ENTRVVSQSLQHYLELGRQELFKILHSIL-L 649
S S + VVE YF P+ + + +V ++ ++ ++++++L ++L L
Sbjct: 340 ILSISCLLKTP-GVVENHGYFLNPSRSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQL 398
Query: 650 NGETREAALSYMAAVVNANMKKAQMQTDD------RLVSTDGFMLNFLWVLQQLSTKI-- 701
+ ET+ LS++ ++AN + ++ + ++ ++D F LN L +L
Sbjct: 399 SPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCK 458
Query: 702 ----KLETVDPTYIFHPRCRITLPNDETRV--NATMEDVNDWLTELYGDQPPFSEPKFPT 755
+L T +PTY C + NDE R N M ++ + P EPKFP
Sbjct: 459 PRSSRLLTFNPTY-----CALKELNDEERKIKNVHMRGLDKETCLI----PAVQEPKFPQ 509
Query: 756 ECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKD-----SPLATRHR 810
+T + L Y+ R ++ + ++L + W+D SP A R
Sbjct: 510 NYNLVTENL----ALTEYTLYLGFHRLHDQMVKINQNLHRLQVAWRDAQQSSSPAADNLR 565
Query: 811 EMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLLLRIL---DPAYP-DIT 866
E Q ++L+ + + L+ CLN + LL+++ + + P ++T
Sbjct: 566 E-------QFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELT 618
Query: 867 LPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCT--QDIVMFLVVMLCNQNY 924
PL D A +PEF+ +++ +FL F+ +++ L + ++ F+ + +
Sbjct: 619 FPL-PDGYSSLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIER 677
Query: 925 IRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLS------TKLLVPSLMKFYTDVE 978
++NP+L AKL EV+ P + + + L +L+K + D+E
Sbjct: 678 MKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQLAEALIKVFVDIE 737
Query: 979 HTGATSEFYDKFTIRYHISTIFKSLW---------QNIAHHGTFMEEFNSGKQFVRYINM 1029
TG +F KF R + I + +W +++A + + E + F+R++N+
Sbjct: 738 FTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNL 797
Query: 1030 LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL 1089
L+ND FLLDE+++ L +I ++Q+ K++ +WD L + ++ +++ L +++R + +
Sbjct: 798 LMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWDSLTPEARREKEAGLQMFGQLARFHNIM 856
Query: 1090 ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK 1149
+ ET+ LT +++ F+ P L R+ +MLN+ LQ L GPK LKV++ ++ F+P+
Sbjct: 857 SNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQ 916
Query: 1150 KLLDQLTDIYLQL-DCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLA 1208
+L+ + IYL L D F + D RSYS LF + + ++K K I F LA
Sbjct: 917 QLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKIN-KPGNMIMAFSNLA 975
Query: 1209 EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI-MDRSIILRHLLNSPT 1267
E+++ + + E Y+DA DEF DP+M TLM DPV LPS + +DRS I RHLL+ T
Sbjct: 976 ERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQT 1035
Query: 1268 DPFNRQTLTESMLEPVPELKEQIQAWMREKQ 1298
DPFNR LT + P ELKE+IQ W+ E++
Sbjct: 1036 DPFNRSPLTMDQIRPNTELKEKIQRWLAERK 1066
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 59.7 bits (143), Expect = 2e-08
Identities = 98/442 (22%), Positives = 153/442 (34%), Gaps = 61/442 (13%)
Query: 5 SADEIRRRRLARLAGG---QTSQPTTPLTSPQRENPP--------GPPIAASAPGPSQSL 53
+A + R+ LA AGG T + P P R + P PP ++PGP S
Sbjct: 49 AAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSP 108
Query: 54 GLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSL--------------ETQSQS 99
G P P+G G+ ++ + + +P S T S +
Sbjct: 109 GRASGTTRPG--PLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 166
Query: 100 LSRSQSMDIDGVSCEKSMSQVDVDSGIEN-----MEVDENDRREKRSLSDKEPSSGPEVS 154
++R V + E E+ E + + PS+G +
Sbjct: 167 MARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQ 226
Query: 155 EEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMST 214
+ L +S R + + PK G + ++
Sbjct: 227 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPK--------GLQALRPPQVTP 278
Query: 215 QTRDENPFASLTATSQ---PIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSL 271
+D P ++S P +A SP L T +P +P + S G+ +L +
Sbjct: 279 PRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQAT 338
Query: 272 YESSPAPTPSFWSSVPVMGP-SLASPSRAASQLAVPSTPLSPHSAASGTAAGS------- 323
+ P+P S ++ P P +LA P A S PLSP + S A +
Sbjct: 339 HSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 398
Query: 324 -----QPSSPRYRPYTVTHPWASSGVSILSSSPS--PPALASSPQAVPASSSRQRPSSTG 376
PS P P++ P AS VS ++ PS PP+LA+ P VP S P S
Sbjct: 399 APFSPPPSPPVQAPFS---PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 455
Query: 377 PPLPPASPSATSRRPSSLRISP 398
PP +P + P L P
Sbjct: 456 ATPPPQAPPPLAAPPLQLAKPP 477
Score = 45.1 bits (105), Expect = 5e-04
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 275 SPAPTPSFWS-----SVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPR 329
SP P+P + + P + PS PS+A LA P + P AS + S P+
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 461
Query: 330 YRPYTVTHPWASSGVSILSSSP-SPPALASSP-QAVPASSSRQRPSSTGPPLPPASPSAT 387
P P A+ + + P +PPALA+ P QA+P+ P ++ P P SPSA+
Sbjct: 462 APP-----PLAAPPLQLAKPPPQAPPALATPPLQALPS------PPASFPGQAPFSPSAS 510
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/199 (26%), Positives = 69/199 (34%), Gaps = 31/199 (15%)
Query: 220 NPFASLTATSQPIAAAAR-----SPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYES 274
+P A+ + P+ AA SP + L P T SV+ L+
Sbjct: 514 SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG---PRLTLALAP 570
Query: 275 SPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYT 334
P P PS S + GP LA S +A+ STP SG G+ S P
Sbjct: 571 GPPPPPSRSPSSTLSGPDLAGHSSSAT-----STPEELRGYDSGPEGGAAASPPPDAELA 625
Query: 335 VTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPP--------LPPASPSA 386
HP A S P+PP P P +TGP P +
Sbjct: 626 ACHPAA------WSRGPAPPLAFRGAPGAPL----PWPPATGPGSADGLCTIYETEGPES 675
Query: 387 TSRRPSSLRISPSLGASGG 405
+ P +L PS G SGG
Sbjct: 676 ATPAPGALDPGPSPGTSGG 694
Score = 40.4 bits (93), Expect = 0.011
Identities = 52/155 (33%), Positives = 71/155 (45%), Gaps = 28/155 (18%)
Query: 262 SFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASP-SRAASQLAVP-STPLSPHSAASGT 319
S ++S S E SPA P G L P SR+ S A P S+P +A GT
Sbjct: 199 SVSSASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGT 253
Query: 320 A-AGSQPSSPR------YRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRP 372
A + PS P+ RP VT P + +P+ L+SSP A P+ S+ P
Sbjct: 254 PRAPAHPSQPKPKGLQALRPPQVTPPRKDA-------APALGPLSSSPLATPSPSAPPSP 306
Query: 373 SSTGP----PLPPASPSATSRRPSSLRISPSLGAS 403
S+ P PPA+P S+ +SL SP+L A+
Sbjct: 307 SAPPSLQTLPSPPATP--PSQATTSLG-SPTLQAT 338
Score = 37.7 bits (86), Expect = 0.072
Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 29/145 (20%)
Query: 273 ESSPAPTPSFWSSVPV-------MGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQP 325
++ P+P SF P M P P +A LA P + P AS T
Sbjct: 490 QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL----- 544
Query: 326 SSPRYRPYTVTHPWASSGVSI-LSSSPSPPALASSPQAVPASSSRQRPSST--GPPLPPA 382
+PR RP T + SG + L+ +P PP P S S PSST GP L
Sbjct: 545 QAPR-RPPTPGPDTSVSGPRLTLALAPGPPP--------PPSRS---PSSTLSGPDLAGH 592
Query: 383 SPSATSRRPSSLRISPSLGASGGAS 407
S SATS P LR S G GGA+
Sbjct: 593 SSSATS-TPEELRGYDS-GPEGGAA 615
Score = 31.2 bits (69), Expect = 6.8
Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 24/139 (17%)
Query: 277 APTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVT 336
AP S PV P AS + L +S A A G +P+
Sbjct: 94 APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS---AEETVARGKATEAPKRSAL--- 147
Query: 337 HPWASSGVSILSSSPSP----PALASSPQAV--------PASSSRQRPSSTGP--PLPPA 382
S+G +S P+P PA+A +A PA S+R RP + GP + A
Sbjct: 148 ----SAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSA 203
Query: 383 SPSATSRRPSSLRISPSLG 401
S +T+ + R PS G
Sbjct: 204 SEHSTTEPSPAARRRPSAG 222
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 58.9 bits (141), Expect = 3e-08
Identities = 57/192 (29%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 223 ASLTAT-SQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPS 281
+SLT + P+ A SP L T +P +P + S G+ +L + + P+P S
Sbjct: 328 SSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLS 387
Query: 282 FWSSVPVMGP-SLASPSRAASQLAVPSTPLSPHSAASGTAAGS------------QPSSP 328
++ P P +LA P A S PLSP + S A + PS P
Sbjct: 388 PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPP 447
Query: 329 RYRPYTVTHPWASSGVSILSSSPS--PPALASSPQAVPASSSRQRPSSTGPPLPPASPSA 386
P++ P AS VS ++ PS PP+LA+ P VP S P S PP +P
Sbjct: 448 VQAPFS---PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 504
Query: 387 TSRRPSSLRISP 398
+ P L P
Sbjct: 505 LAAPPLQLAKPP 516
Score = 45.1 bits (105), Expect = 5e-04
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 275 SPAPTPSFWS-----SVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPR 329
SP P+P + + P + PS PS+A LA P + P AS + S P+
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ 500
Query: 330 YRPYTVTHPWASSGVSILSSSP-SPPALASSP-QAVPASSSRQRPSSTGPPLPPASPSAT 387
P P A+ + + P +PPALA+ P QA+P+ P ++ P P SPSA+
Sbjct: 501 APP-----PLAAPPLQLAKPPPQAPPALATPPLQALPS------PPASFPGQAPFSPSAS 549
Score = 43.9 bits (102), Expect = 0.001
Identities = 58/158 (36%), Positives = 69/158 (43%), Gaps = 29/158 (18%)
Query: 262 SFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASP-SRAASQLAVP-STPLSPHSAASGT 319
S ++S S E SPA P G L P SR+ S A P S+P +A GT
Sbjct: 208 SVSSASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGT 262
Query: 320 A-AGSQPSSPR------YRPYTVTHPW--ASSGVSILSSSP----SPPALASSPQ----- 361
A + PS P+ RP VT P A+ + LSSSP SP A S
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLP 322
Query: 362 AVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
A P SSS +T PL P SPSA P SL+ PS
Sbjct: 323 ATPHSSSLTCQLATPLPLAPPSPSA----PPSLQTLPS 356
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/199 (26%), Positives = 69/199 (34%), Gaps = 31/199 (15%)
Query: 220 NPFASLTATSQPIAAAAR-----SPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYES 274
+P A+ + P+ AA SP + L P T SV+ L+
Sbjct: 553 SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG---PRLTLALAP 609
Query: 275 SPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYT 334
P P PS S + GP LA S +A+ STP SG G+ S P
Sbjct: 610 GPPPPPSRSPSSTLSGPDLAGHSSSAT-----STPEELRGYDSGPEGGAAASPPPDAELA 664
Query: 335 VTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPP--------LPPASPSA 386
HP A S P+PP P P +TGP P +
Sbjct: 665 ACHPAA------WSRGPAPPLAFRGAPGAPL----PWPPATGPGSADGLCTIYETEGPES 714
Query: 387 TSRRPSSLRISPSLGASGG 405
+ P +L PS G SGG
Sbjct: 715 ATPAPGALDPGPSPGTSGG 733
Score = 37.7 bits (86), Expect = 0.072
Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 29/145 (20%)
Query: 273 ESSPAPTPSFWSSVPV-------MGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQP 325
++ P+P SF P M P P +A LA P + P AS T
Sbjct: 529 QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL----- 583
Query: 326 SSPRYRPYTVTHPWASSGVSI-LSSSPSPPALASSPQAVPASSSRQRPSST--GPPLPPA 382
+PR RP T + SG + L+ +P PP P S S PSST GP L
Sbjct: 584 QAPR-RPPTPGPDTSVSGPRLTLALAPGPPP--------PPSRS---PSSTLSGPDLAGH 631
Query: 383 SPSATSRRPSSLRISPSLGASGGAS 407
S SATS P LR S G GGA+
Sbjct: 632 SSSATS-TPEELRGYDS-GPEGGAA 654
Score = 34.3 bits (77), Expect = 0.80
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 34/189 (17%)
Query: 244 LLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQL 303
+L G P+ G +++ ES+P P+ + P+ P+ +
Sbjct: 46 VLGAAGAVGRKPLAERAGGIGGATIP---ESAPRAGPTRSAGTSSRNPASRPPASGRGER 102
Query: 304 AVPSTPLSPHSAAS-GTAAGSQPSSPRYRP-------YTVTHPWA---------SSGVSI 346
A P+ SP +S G A+G+ P + TV A S+G
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162
Query: 347 LSSSPSP----PALASSPQAV--------PASSSRQRPSSTGP--PLPPASPSATSRRPS 392
+S P+P PA+A +A PA S+R RP + GP + AS +T+
Sbjct: 163 DTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSP 222
Query: 393 SLRISPSLG 401
+ R PS G
Sbjct: 223 AARRRPSAG 231
Score = 34.3 bits (77), Expect = 0.80
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 292 SLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSP 351
+L++ +R + P TP SP A AAG++ PR P P +SS+
Sbjct: 155 ALSAGARRDTSGPTPGTP-SPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS 213
Query: 352 SPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATS 388
SP A R+RPS+ G PAS S +S
Sbjct: 214 EHSTTEPSPAA------RRRPSAGGGLQRPASRSLSS 244
Score = 34.3 bits (77), Expect = 0.80
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 19/99 (19%)
Query: 306 PSTPLSPHSAASGTAAGSQPSSPRYRPYTVT---HPWASSGVSILSSSPSP--------- 353
PS ++ S A+GT G +P RP T SS ++ PSP
Sbjct: 172 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 231
Query: 354 -----PALAS-SPQAVPASS-SRQRPSSTGPPLPPASPS 385
PA S S A P SS +R PS+ G P PA PS
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPS 270
Score = 33.5 bits (75), Expect = 1.4
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 14 LARLAGGQTSQPTTPLTSPQRENPP--GPPIAASAPGPSQSLGLNVHNMTPATSPIGASG 71
L R A S TPL+SP R P G P A + P + GL T P
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP----- 288
Query: 72 VAHRSQSSEGVSSLSSS----PSNSLETQSQS 99
R ++ + LSSS PS S QSQ+
Sbjct: 289 ---RKDAAPALGPLSSSPLATPSPSAALQSQA 317
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 58.5 bits (140), Expect = 4e-08
Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Query: 245 LNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLA 304
+ +G PG + S AS AS S Y + +PTP S P + SP A S
Sbjct: 1535 VGSGMTPGAAGFSPSAAS-DASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSY 1593
Query: 305 VPSTPL---------SPHSAA-SGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPP 354
P++P +P S + S T+ P+SP Y P + + S S S S SP
Sbjct: 1594 SPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1653
Query: 355 ALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
+ + SP + S + S T P P SPS + PS SPS
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1698
Score = 55.8 bits (133), Expect = 3e-07
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 247 TGSNPGTSPMFCSV-ASFGASSLSSLYESSP--APTPSFWSSVPVMGPSLASPSRAASQL 303
+G +PG SP + S G+ SS Y SP A +PS+ + P P S
Sbjct: 1555 SGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPS 1614
Query: 304 AVPSTP-LSPHSAA-SGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQ 361
P++P SP S + S T+ P+SP Y P + ++ S S S S SP + + SP
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 362 AVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
+ S + S T P P SPS + PS SPS
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Score = 52.8 bits (125), Expect = 2e-06
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 253 TSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSP 312
TSP + + + + S +SP+ +P+ S P PS + S + S + +P SP
Sbjct: 1625 TSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 313 HSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRP 372
+ S T+ P+SP Y P + ++ S S S S SP + + SP + S +
Sbjct: 1684 --SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1741
Query: 373 SSTGPPLPPASPSATSRRPSSLRISPS 399
S T P P SP+ T PS SPS
Sbjct: 1742 SPTSPNYSPTSPNYTPTSPSYSPTSPS 1768
Score = 51.6 bits (122), Expect = 5e-06
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 253 TSPMFCSVASFGASSLSSLYE-SSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLS 311
TSP + + G + S Y +SP+ +P+ S P P+ + S + S + +P S
Sbjct: 1596 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPT-SPNYSPTSPSYSPTSPSYSPTS 1654
Query: 312 PHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQR 371
P + S T+ P+SP Y P + ++ S S S S SP + + SP + S +
Sbjct: 1655 P--SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 372 PSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHFT 417
S T P P SPS + PS SPS S + N+ S ++T
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPNYSPTSPNYT 1756
Score = 51.6 bits (122), Expect = 5e-06
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 253 TSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSP 312
TSP + + + + S +SP+ +P+ S P PS + S + S + +P SP
Sbjct: 1632 TSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 313 HSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRP 372
+ S T+ P+SP Y P + ++ S S S S SP + + SP + S +
Sbjct: 1691 --SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 373 SSTGPPLPPASPSATSRRPSSLRISPS 399
S T P P SPS + PS SP+
Sbjct: 1749 SPTSPNYTPTSPSYSPTSPSYSPTSPN 1775
Score = 51.2 bits (121), Expect = 6e-06
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 247 TGSNPGT-SPMFCSVASFGASSLSSLYESSPA-----------PTPSFWSSVPVMGPSLA 294
T +PG+ P + S G + S +SPA +PS+ + P P+
Sbjct: 1568 TPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSP 1627
Query: 295 SPSRAASQLAVPSTPLSPHSAA-SGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSP 353
S S + + S SP S + S T+ P+SP Y P + ++ S S S S SP
Sbjct: 1628 SYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1687
Query: 354 PALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
+ + SP + S + S T P P SPS + PS SPS
Sbjct: 1688 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1733
Score = 50.4 bits (119), Expect = 1e-05
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 253 TSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSP 312
TSP + + + + S +SP+ +P+ S P PS + S + S + +P SP
Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSP 1718
Query: 313 HSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRP 372
+ S T+ P+SP Y P + ++ S S S + +P + + SP + S +
Sbjct: 1719 --SYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNY 1776
Query: 373 SSTGPPLPPASPSATSRRPSSLRISPSLGAS 403
+ T P P SPS + PS SPS S
Sbjct: 1777 TPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Score = 50.4 bits (119), Expect = 1e-05
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 253 TSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSP 312
TSP + + + + S +SP+ +P+ S P PS + S + S + +P SP
Sbjct: 1681 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSP 1739
Query: 313 HSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRP 372
+ S T+ P+SP Y P + ++ S S S + +P + SP + S +
Sbjct: 1740 --SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSY 1797
Query: 373 SSTGPPLPPASPSATSRRPSSLRISPSLGAS 403
S T P P+SP T + P+ SPS S
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Score = 49.3 bits (116), Expect = 2e-05
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 253 TSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSP 312
TSP + + + + S +SP+ +P+ S P PS + S S + TP SP
Sbjct: 1702 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPNYSPTSPNYTPTSP 1760
Query: 313 HSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRP 372
+ S T+ P+SP Y P + + S S S S SP + + SP SS R P
Sbjct: 1761 --SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP-----SSPRYTP 1813
Query: 373 SST--GPPLPPASPSATSRRPSSLRISPS 399
S P P SPS+ S P+S + +P+
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Score = 48.9 bits (115), Expect = 3e-05
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 253 TSPMFCSVASFGASSLSSLYESSP--APT-PSFWSSVPVMGPSLASPSRAASQLAVPSTP 309
TSP + + + + + +SP PT PS+ + P P+ + + + + S
Sbjct: 1730 TSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPS 1789
Query: 310 LSPHSAA-SGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSS 368
SP S + S T+ PSSPRY P + T+ +S S S S SP +SP+ P S S
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP----TSPKYTPTSPS 1845
Query: 369 RQRPSST--GPPLPPASPSATSRRPSSLRISPS 399
PSS P P SP++ P+S + SP+
Sbjct: 1846 -YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Score = 45.4 bits (106), Expect = 3e-04
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 253 TSPMFCSVASFGASSLSSLYESSPA---PTPSFWSSVPVMGPSLASPSRAASQLAVPSTP 309
TSP + + + SSP+ +PS+ + P P+ S S ++ + S
Sbjct: 1800 TSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPK 1859
Query: 310 LSPHSAA-SGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSS 368
SP S S T+ P+SP Y P T + S S S +P + SP + S +
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 369 RQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
+ S T P P SP ++ P+S SP+
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPGYSPT 1950
Score = 42.0 bits (97), Expect = 0.004
Identities = 47/153 (30%), Positives = 61/153 (39%), Gaps = 12/153 (7%)
Query: 254 SPMFCSVASFGASSLSSLYESSPAPTP---SFWSSVPVMGPSLASPSRAASQLAVPSTPL 310
SP + + + S S +SP TP S+ S P P+ S + + + S
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1874
Query: 311 SPHSAA-SGTAAGSQPSSPRYRP----YTVTHPWASSGVSILSSSPSPPALASSPQAVPA 365
SP S S T P+SP Y P YT T P S S S SP +SP P
Sbjct: 1875 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP-KYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 366 SSSRQRPSSTGPPLPPASPSATSRRPSSLRISP 398
S S T P P SP+ + P+ ISP
Sbjct: 1934 SPKGSTYSPTSPGYSPTSPTYSLTSPA---ISP 1963
Score = 40.8 bits (94), Expect = 0.009
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 253 TSPMFCSVASFGASSLSSLYESSPA--PT-PSFWSSVPVMGPSLASPSRAASQLAVPSTP 309
+SP + + S S SSP+ PT P + + P PS + + + + S
Sbjct: 1807 SSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPK 1866
Query: 310 LSPHSAA-SGTAAGSQPSSPRYRPYTVTHPWASSGVSILS---SSPSPPALASSPQAVPA 365
SP S S T+ P++P+Y P + T+ S + S S SP +SP+ P
Sbjct: 1867 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPT 1926
Query: 366 SSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSL 400
S + S G P SP + P+ SP++
Sbjct: 1927 SPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Score = 36.6 bits (83), Expect = 0.16
Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 23/140 (16%)
Query: 278 PTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGT---AAGSQPS-------- 326
PT F+ S P ++ +Q A P+ S SG AAG PS
Sbjct: 1498 PTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGF 1557
Query: 327 SPRYRPYTVTHPWASSGVSILSSSPSPPAL-----ASSPQAVPASSSRQRPSSTG--PPL 379
SP Y P W+ + S S PS P + A SP P S + + S G P
Sbjct: 1558 SPGYSP-----AWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQS 1612
Query: 380 PPASPSATSRRPSSLRISPS 399
P SP++ S P+S SP+
Sbjct: 1613 PSYSPTSPSYSPTSPSYSPT 1632
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 56.2 bits (134), Expect = 2e-07
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 224 SLTATSQPIAAAARSPDRNLLLNTGSN--PG---TSPMFCSVASFGASSLSSLYESSPAP 278
+L + P +++++P LLL S+ PG T CS AS+L+S + S+P P
Sbjct: 1506 TLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNP 1565
Query: 279 TPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
P+ SL +P+ +ASQ +TPL+P AA TA + +P P V P
Sbjct: 1566 APA--------QASLLAPASSASQAL--ATPLAP-MAAPQTAILAPSPAPPLAPLPVLAP 1614
Query: 339 WASSGVSILSSSPSPPALA---------SSPQAVPASSSRQRPSSTGP--PLPPASPSAT 387
+ + SS P +A +S VPA + PSST P P SP +
Sbjct: 1615 SPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPS 1674
Query: 388 SRRPSSLRISPSLGASGGASN 408
+L ++P+L + G S+
Sbjct: 1675 PASTQTLALAPALAPTLGGSS 1695
Score = 43.9 bits (102), Expect = 0.001
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 24/181 (13%)
Query: 221 PFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCS------VASFGASSLSSLYES 274
P A + A I A + +P L +PG +P+ S V + ++ +SL +
Sbjct: 1586 PLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASA 1645
Query: 275 SPAPTPSFWSSVPVMGPSLAS-------PSRAASQLAVPSTPLSPHSAASGTAAGSQPSS 327
SP P P+ PV+ PS PS S + + L+P A + T GS PS
Sbjct: 1646 SPVPAPT-----PVLAPSSTQTMLPAPVPSPLPSPASTQTLALAP--ALAPTLGGSSPSQ 1698
Query: 328 P-RYRPYTVTHPWASSGVSILSSS---PSPPALASSPQAVPASSSRQRPSSTGPPLPPAS 383
P+ + +S+ +S P+P S P ++ + PPL PAS
Sbjct: 1699 TLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPAS 1758
Query: 384 P 384
P
Sbjct: 1759 P 1759
Score = 40.8 bits (94), Expect = 0.009
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 218 DENPFASLTAT--SQPIAAAARSPDRNLLLNTGSNPGTSPMFC--SVASFGASSLSSLYE 273
+ +P AS ++ S P++++ L S P T P+ +V++ G + L+S+
Sbjct: 1419 NSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTP 1478
Query: 274 SSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPY 333
AP P + PS ASPS +A L + + P S G P+S
Sbjct: 1479 PL-APVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGL 1537
Query: 334 TVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTG------PPLPPASPSAT 387
T A S V + +S+ + P S+P PA +S P+S+ P P A+P
Sbjct: 1538 NSTVAPACSPVLVPASALASP-FPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTA 1596
Query: 388 SRRPS---SLRISPSLGASGGAS 407
PS L P L S GA+
Sbjct: 1597 ILAPSPAPPLAPLPVLAPSPGAA 1619
Score = 40.4 bits (93), Expect = 0.011
Identities = 96/402 (23%), Positives = 148/402 (36%), Gaps = 79/402 (19%)
Query: 22 TSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGAS---GVAHRSQS 78
TS+P TP S + PP P + AP P S L P T P G + A + +
Sbjct: 1096 TSRPPTPTLS-LKPTPPAPVRLSPAPPPGSSSLLK-----PLTVPPGYTFPPAAATTTST 1149
Query: 79 SEGVSSLSSSPSNSLETQSQSLS-----RSQSMDIDGVSCEKSMSQVDVDSGIENMEVDE 133
+ ++ ++ P+ + Q LS R S ++ + S++Q V + + +
Sbjct: 1150 TTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTF 1209
Query: 134 NDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFK--QNP 191
+ K +L+ + V + + LQ R+V+ L S Q P
Sbjct: 1210 QIQGNKLTLTGAQVRQ-LAVGQPRPLQ--------------RNVVHLVSAGGQHHLISQP 1254
Query: 192 KEV--FSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGS 249
V G + VL ST + P T S P+AA P ++ NTG
Sbjct: 1255 AHVALIQAVAPTPGPTPVSVLPSSTPSTTPAP----TGLSLPLAANQVPP--TMVNNTGV 1308
Query: 250 NPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTP 309
+ V L+ + +PAP P V+ P P+ +L P+
Sbjct: 1309 ------VKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPR---PTLTPGRLPTPTL- 1358
Query: 310 LSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPAS--- 366
GTA P+ RP L SPSP AS+P A P +
Sbjct: 1359 --------GTARAPMPTPTLVRPLLK-----------LVHSPSPEVSASAPGAAPLTISS 1399
Query: 367 -----SSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGAS 403
SS P+S+ P+P +SP A+ P S +S L +S
Sbjct: 1400 PLHVPSSLPGPASSPMPIPNSSPLAS---PVSSTVSVPLSSS 1438
Score = 38.9 bits (89), Expect = 0.032
Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 273 ESSPAPTP-----SFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSS 327
+ +P P P S S GP L SR + +P PL P+S G+ PS
Sbjct: 1035 QPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLP--PLQPNS---GSLPQVLPS- 1088
Query: 328 PRYRPYTVTHPWASSGVSILSSSPSPPA-LASSPQAVPASSSRQRPSSTGP--PLPPASP 384
P V + LS P+PPA + SP P SSS +P + P PPA+
Sbjct: 1089 ----PLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAA 1144
Query: 385 SATS 388
+ TS
Sbjct: 1145 TTTS 1148
Score = 38.9 bits (89), Expect = 0.032
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 230 QPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVM 289
+P+ SP + + S PG +P+ S SSL SSP P P+ +
Sbjct: 1372 RPLLKLVHSPSPEV---SASAPGAAPLTISSPLHVPSSLPGP-ASSPMPIPNSSPLASPV 1427
Query: 290 GPSLASPSRAASQLAVPSTPLSPHSA-------ASGTAAGSQPSSPRYRPYTVTHPWASS 342
+++ P ++ ++VP+T +P SA A T + S P+ +VT P A
Sbjct: 1428 SSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLT----SVTPPLA-- 1481
Query: 343 GVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRP 391
++ ++P PP+LA S A P++S+ +T P L S S T P
Sbjct: 1482 --PVVPAAPGPPSLAPS-GASPSASALTLGLATAPSL---SSSQTPGHP 1524
Score = 33.1 bits (74), Expect = 1.8
Identities = 78/355 (21%), Positives = 125/355 (35%), Gaps = 46/355 (12%)
Query: 86 SSSPSNSLETQSQSLSRSQSMDIDGVSCE-------KSMSQVDVDSGIENMEVDEND--- 135
SSS ++ E + ++++ Q+ ++ C ++ +Q + E E +END
Sbjct: 2219 SSSVPSAPEEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFP 2278
Query: 136 ----RREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNP 191
R ++ E S E ++ + I R + K + + +S + KQ
Sbjct: 2279 AGEGEEAGRPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSR--EELKQAE 2336
Query: 192 KEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNP 251
++V + KDL Q EV + Q +E P A ++ R R+ P
Sbjct: 2337 EQVEAARKDL-DQAKEEVFRLP-QEEEEGPGAGDESSCGTGGGTHR---RSKKAKAPERP 2391
Query: 252 GTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLS 311
GT V+ + + ++ P S + P SP+R P +
Sbjct: 2392 GTR-----VSERLRGARAETQGANHTPVISAHQTRSTTTPPRCSPARERVPRPAPRPRPT 2446
Query: 312 PHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSP--------PALASSPQAV 363
P SA + A P + +P V IL S P P PA P
Sbjct: 2447 PASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACT 2506
Query: 364 PASSSRQRPSST-----------GPPLPPASPSATSRRPSSLRISPSLGASGGAS 407
P + P+ T GPP P S S T+ P LR L A AS
Sbjct: 2507 PPPAHTPPPAQTCLVTPSSPLLLGPPSVPISASVTN-LPLGLRPEAELCAQALAS 2560
Score = 31.2 bits (69), Expect = 6.8
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Query: 293 LASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWAS-SGVSILSSSP 351
L P AAS + + ++ T A + SSP VT A+ S S +SSP
Sbjct: 2652 LELPPSAASDEPLQEPLEADRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSATSSP 2711
Query: 352 SPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSL 394
P+ A P+ ++ R TG P P P + P L
Sbjct: 2712 EGPSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRL 2754
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 53.9 bits (128), Expect = 1e-06
Identities = 61/192 (31%), Positives = 77/192 (40%), Gaps = 19/192 (9%)
Query: 211 MMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSS 270
++S Q +P L + + + R LL S P P S G SL S
Sbjct: 78 LVSPQYSPVSPHCPLVSPHYSLVSPHRPLVSPLLSGVPSPPSDVPSLLS----GVPSLPS 133
Query: 271 LYESSPAPTPSFWSSVPVMGPSLASPSR--AASQLAVPSTPLSPHSAASGTAAGSQPSSP 328
S P+ PS S VP + + SP + VPS P S SG S PS
Sbjct: 134 DVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPSLLSGVP--SPPSDV 191
Query: 329 RYRPYTVTHPWASSGVSILSSSPSPPA-------LASSPQAVPASSSRQRPSSTGPPLPP 381
P V P S V +LS PSPP+ + S P VP+ S PS +G P PP
Sbjct: 192 PSPPSDVPSP--PSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPS-DVPSLSGVPSPP 248
Query: 382 AS-PSATSRRPS 392
+ PS S PS
Sbjct: 249 SDVPSLLSGVPS 260
Score = 47.4 bits (111), Expect = 9e-05
Identities = 56/181 (30%), Positives = 72/181 (39%), Gaps = 21/181 (11%)
Query: 231 PIAAAARSP--DRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPV 288
P+ + SP D LL + S P P S SLS + S P+ PS S VP
Sbjct: 206 PLLSDVPSPPSDVPLLSDVPSPPSDVPSLPS----DVPSLSGV-PSPPSDVPSLLSGVPS 260
Query: 289 MGPSLASPSRAASQLA-VPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTH--------PW 339
++ PS S L+ VPS P S SG PS P P ++ P
Sbjct: 261 PPSDISPPSDVPSLLSDVPSLPSDVPSLLSGV-----PSPPSDVPSLLSDVPSPPSDVPS 315
Query: 340 ASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
S + +LS PSPP+ SP + S P +G P P + S PS PS
Sbjct: 316 PPSDIPLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSGVPSPLSDVPLLSGVPSPPSDVPS 375
Query: 400 L 400
L
Sbjct: 376 L 376
Score = 43.9 bits (102), Expect = 0.001
Identities = 45/135 (33%), Positives = 54/135 (40%), Gaps = 8/135 (5%)
Query: 266 SSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQP 325
S L S S P+ PS S VP + ++SP VPS S SG S P
Sbjct: 108 SPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSD-----VPSLLSDVPSLLSGVP--SPP 160
Query: 326 SSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPS 385
S P V P S S+LS PSPP+ SP + S P + P PP+
Sbjct: 161 SDVPSPPSDVPSP-PSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVP 219
Query: 386 ATSRRPSSLRISPSL 400
S PS PSL
Sbjct: 220 LLSDVPSPPSDVPSL 234
Score = 33.9 bits (76), Expect = 1.0
Identities = 49/182 (26%), Positives = 65/182 (35%), Gaps = 25/182 (13%)
Query: 229 SQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAP---TPSFWSS 285
S P + S +LL + S P P S S + SL P+P PS S
Sbjct: 260 SPPSDISPPSDVPSLLSDVPSLPSDVPSLLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSD 319
Query: 286 VPVMGPSLASPSRAASQLA-VPSTPLS-------PHSAASGTAAGSQPSSPRYRP----- 332
+P++ + PS S + VPS P P + PS P P
Sbjct: 320 IPLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSGVPSPLSDVPLLSGVPSPPSDVPSLLMS 379
Query: 333 --------YTVTHPWASSGVSILSSSPSP-PALASSPQAVPASSSRQRPSSTGPPLPPAS 383
Y++ P S+LS PS + SSP VP+ S S P LP
Sbjct: 380 PHRLLMSHYSLVSPHRLDVPSLLSDVPSLLSGVPSSPSGVPSLPSGVPILSGVPSLPSGV 439
Query: 384 PS 385
PS
Sbjct: 440 PS 441
Score = 32.7 bits (73), Expect = 2.3
Identities = 45/126 (35%), Positives = 50/126 (39%), Gaps = 31/126 (24%)
Query: 249 SNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVP--VMGP--------SLASPSR 298
S P P+ V S LS + S P+P S VP +M P SL SP R
Sbjct: 342 SPPSDVPLLSGVPS----PLSDVPLLSGVPSPP--SDVPSLLMSPHRLLMSHYSLVSPHR 395
Query: 299 AASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALAS 358
L VPS S SG PSSP P SGV ILS PS P+
Sbjct: 396 ----LDVPSLLSDVPSLLSGV-----PSSPSGVPSL------PSGVPILSGVPSLPSGVP 440
Query: 359 SPQAVP 364
SP VP
Sbjct: 441 SPSGVP 446
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 53.5 bits (127), Expect = 1e-06
Identities = 95/394 (24%), Positives = 155/394 (39%), Gaps = 47/394 (11%)
Query: 23 SQPTTPLTS-PQRENPPGPPIAAS-APGPSQSLGLNVHNMTPATSPIGASGVAHR-SQSS 79
S+ +TPLTS P P P A++ + P S V + ++SP A G + S S
Sbjct: 3042 SEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPISTYS 3101
Query: 80 EGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREK 139
EG + L+ P ++ S ++S ++S VD+ E
Sbjct: 3102 EGSTPLTGVPVSTTPVTSSAIS--------------TLSTTPVDTSTPVTTSTEAHSSPT 3147
Query: 140 RSLSDKEPSSGP-EVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDF 198
S P+S P E S V + VS +D S+LSA V +
Sbjct: 3148 TSEGTSMPTSTPSEGSTPLTYMPVSTMLVVSSED--------STLSATPVDTSTPVTTS- 3198
Query: 199 KDLIGQILMEVLMMSTQTRDEN--PFASLTATSQPIAAAARS------PDRNLLLNTGSN 250
+ E + T T E P S+ ++ P+A++ S D N L T +
Sbjct: 3199 TEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTE 3258
Query: 251 PGTSP-------MFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQL 303
+SP M S S G++ L+S+ S+ S S++ ++P SQ
Sbjct: 3259 ASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQA 3318
Query: 304 AVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAV 363
+ S+P + T+ S+ S+P T P SS S LS++P S+P
Sbjct: 3319 S--SSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVD---TSTPVTT 3373
Query: 364 PASSSRQRPSSTGPPLPPASPSATSRRPSSLRIS 397
+S ++ G +P +SPS + +S+ +S
Sbjct: 3374 STEASLSPTTAEGTSIPTSSPSEGTTPLASMPVS 3407
Score = 52.4 bits (124), Expect = 3e-06
Identities = 107/484 (22%), Positives = 174/484 (35%), Gaps = 129/484 (26%)
Query: 22 TSQPTTP------LTSPQRENPPGP-PIAASAPGPS----QSLGLNVHNMTPATSPIGAS 70
TS PTTP +++P E+ ++AP PS SL V TP T+ AS
Sbjct: 136 TSSPTTPEGTDVPMSTPSEESISSTMAFVSTAPLPSFEAYTSLTYKVDMSTPLTTSTQAS 195
Query: 71 G--------VAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDV 122
+S +SEG + L+S P+++++ S + ++ + ++
Sbjct: 196 SSPTTPESTTIPKSTNSEGSTPLTSMPASTMKVASS----------EAITLLTTPVEIST 245
Query: 123 DSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFR----VSWKDRDRDVI 178
I E SLS+ PS G L ++ + +S ++
Sbjct: 246 PVTISAQASSSPTTAEGPSLSNSAPSGGSTPLTRMPLSVMLVVSSEASTLSTTPAATNIP 305
Query: 179 FLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARS 238
++S A E S + ST T P S A++ P+A + S
Sbjct: 306 VITSTEASSSPTTAEGTS-------------IPTSTYTEGSTPLTSTPASTMPVATSEMS 352
Query: 239 P------DRNLLLNTGSNPGTSP-------MFCSVASFGASSLSSL-------------- 271
D + L+ T + P + P M S S G++ L+++
Sbjct: 353 TLSITPVDTSTLVTTSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVASSEAST 412
Query: 272 ---------------YESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAA 316
E+S +PT + +S+ PS S + + V +TP++ A+
Sbjct: 413 TSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPS--EGSTPLTSMPVSTTPVASSEAS 470
Query: 317 S--------------GTAAGSQP----------------SSPRYRPYTVTHPWASSGVSI 346
+ T A S P S+P T P ASS S
Sbjct: 471 NLSTTPVDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEAST 530
Query: 347 LSSSP---SPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGAS 403
LS++P S P SS ASSS P T +P ++PS S +++ +S L S
Sbjct: 531 LSTTPVDTSTPVTTSS----EASSSSTTPEGTS--IPTSTPSEGSTPLTNMPVSTRLVVS 584
Query: 404 GGAS 407
AS
Sbjct: 585 SEAS 588
Score = 51.2 bits (121), Expect = 6e-06
Identities = 101/419 (24%), Positives = 158/419 (37%), Gaps = 42/419 (10%)
Query: 4 LSADEIRRRRLARLAGGQTSQPTT------PLTSPQRENPPGPPIAASAPGPSQSLGLNV 57
LS + R L + G +S PTT P ++P + P I S + S +
Sbjct: 2653 LSTTPVDTRTLVTTSTGTSSSPTTAEGSSMPTSTPGERSTPLTNILVSTTLLANSEASTL 2712
Query: 58 HNMTPATS-PIGASGVAHRSQSS-EGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEK 115
TS P+ S A S ++ EG S S+PS+ S L+ + S E
Sbjct: 2713 STTPVDTSTPVTTSAEASSSPTTAEGTSMRISTPSDG----STPLTSILVSTLPVASSEA 2768
Query: 116 S-MSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRD 174
S +S VD+ I E + P+S P + + V+ +
Sbjct: 2769 STVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPVASSEA- 2827
Query: 175 RDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILME--VLMMSTQTRDENPFASLTATSQPI 232
+LS V + K E V+ +ST + S+ ++ P+
Sbjct: 2828 ------GTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPISTASEGSTLLTSIPVSTTPV 2881
Query: 233 AAAARSP------DRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSV 286
A++ S D ++ + T + +SP S S+ S E S T S+V
Sbjct: 2882 ASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPS---EVSTPLTSILVSTV 2938
Query: 287 PVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAG-SQPSSP---RYRPYTV----THP 338
PV G ++ S P T + S++ TA G S P S R P T T P
Sbjct: 2939 PVAGSEASTLSTTPVDTRTPVTTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMP 2998
Query: 339 WASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRIS 397
ASS S LS + PA S+P +S ++ G +P ++PS S +S+ +S
Sbjct: 2999 VASSEASTLSRT---PADTSTPVTTSTEASSSPTTAEGTGIPISTPSEGSTPLTSIPVS 3054
Score = 50.8 bits (120), Expect = 8e-06
Identities = 101/419 (24%), Positives = 157/419 (37%), Gaps = 82/419 (19%)
Query: 22 TSQP--TTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATS-PIGASGVA-HRSQ 77
TS P TTP+ S + P+ S P V T ATS P A G + S
Sbjct: 927 TSMPDSTTPVVSSEARTLSATPVDTSTP---------VTTSTEATSSPTTAEGTSIPTST 977
Query: 78 SSEGVSSLSSSP-SNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDR 136
SEG + L+S+P S++L S++ ++S VDS E
Sbjct: 978 PSEGTTPLTSTPVSHTLVANSEA---------------STLSTTPVDSNTPLTTSTEASS 1022
Query: 137 REKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFS 196
+ P+S P ++ V+ + S+LS V +
Sbjct: 1023 PPPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSET-------STLSTTPADTSTPVTT 1075
Query: 197 DFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPM 256
+ + M T T E S TS P++ R ++ + S T+P+
Sbjct: 1076 YSQASSSSTTADGTSMPTSTYSEG---STPLTSVPVST------RLVVSSEASTLSTTPV 1126
Query: 257 FCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPS-----LAS---------------- 295
S+ +++ E+S +PT + +S+P PS LAS
Sbjct: 1127 DTSIP------VTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTLVVSSEANTL 1180
Query: 296 ---PSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYT---VTH-PWASSGVSILS 348
P + +Q+A + SP A T+ + R P T V H P ASS S LS
Sbjct: 1181 STTPVDSKTQVATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHTPVASSEASTLS 1240
Query: 349 SSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGAS 407
+SP S+P A +S ++ G LP ++ S S +S+ +S +L S AS
Sbjct: 1241 TSPVD---TSTPVTTSAETSSSPTTAEGTSLPTSTTSEGSTLLTSIPVSTTLVTSPEAS 1296
Score = 50.8 bits (120), Expect = 8e-06
Identities = 97/436 (22%), Positives = 174/436 (39%), Gaps = 79/436 (18%)
Query: 23 SQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPA--TSPIGASGVAHRSQSSE 80
S+ +T T+P N P A + P+ + G ++ TP+ ++ + + V+ + +S
Sbjct: 1470 SEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASS 1529
Query: 81 GVSSLSSSPS-NSLETQSQSLSRSQSMDIDGVSCEKS----------------------- 116
++SLS++P+ S + S + S DG S + S
Sbjct: 1530 EINSLSTTPAVTSTPVTTYSQASSSPTTADGTSMQTSTYSEGSTPLTSLPVSTMLVVSSE 1589
Query: 117 ---MSQVDVDSGIE---NMEVDENDRREKRSLSDKEPSSGP------EVSEEQALQLVCK 164
+S +DS + + E + E S++ PS G VS
Sbjct: 1590 ANTLSTTPIDSKTQVTASTEASSSTTAEGSSMTISTPSEGSPLLTSIPVSTTPVASPEAS 1649
Query: 165 IFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFAS 224
+ D + VI + +S+ P E S + ST T P S
Sbjct: 1650 TLSTTPVDSNSPVITSTEVSS--SPTPAEGTS-------------MPTSTYTEGRTPLTS 1694
Query: 225 LTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLS---SLYESSPAPTPS 281
+T + P+A++A S L+T ++P+ S + + + S S+ S+P+ +
Sbjct: 1695 ITVRTTPVASSAIS-----TLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTT 1749
Query: 282 FWSSVPVMGPSLASPSRAASQLAVP---STPL-------SPHSAASGTAAGSQPSSPRYR 331
+S+PV + S S A++ A P STP+ S + A GT+ + S
Sbjct: 1750 PLTSIPVSTTPVLS-SEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMT 1808
Query: 332 PYT---VTHPW-ASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSAT 387
P T V+H A+S S LS++P ++SP + S + G + ++PS
Sbjct: 1809 PLTSTPVSHTLVANSEASTLSTTPVD---SNSPVVTSTAVSSSPTPAEGTSIATSTPSEG 1865
Query: 388 SRRPSSLRISPSLGAS 403
S +S+ +S + AS
Sbjct: 1866 STALTSIPVSTTTVAS 1881
Score = 50.4 bits (119), Expect = 1e-05
Identities = 87/398 (21%), Positives = 149/398 (37%), Gaps = 51/398 (12%)
Query: 26 TTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVA-HRSQSSEGVSS 84
TTP+ S + P+ S PG + + +SP A G++ S SEG +
Sbjct: 1405 TTPVVSSEASTLSATPVDTSTPGTTSA--------EATSSPTTAEGISIPTSTPSEGKTP 1456
Query: 85 LSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSD 144
L S P ++ + S + +D S S V + + + E S++
Sbjct: 1457 LKSIPVSNTPVANSEASTLSTTPVD------SNSPVVTSTAVSSSPTPA----EGTSIAI 1506
Query: 145 KEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQ 204
PS G AL + VS I S + P +S
Sbjct: 1507 STPSEG-----STALTSI----PVSTTTVASSEINSLSTTPAVTSTPVTTYSQASSSPTT 1557
Query: 205 ILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFG 264
+ ST + P SL ++ + S + N L T + T + AS
Sbjct: 1558 ADGTSMQTSTYSEGSTPLTSLPVSTMLVV----SSEANTLSTTPIDSKTQVTASTEASSS 1613
Query: 265 ASSL-SSLYESSPAPTPSFWSSVPVMGPSLASP-------------SRAASQLAVPSTPL 310
++ SS+ S+P+ +S+PV +ASP S + V S+P
Sbjct: 1614 TTAEGSSMTISTPSEGSPLLTSIPVSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPT 1673
Query: 311 SPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQ 370
+ T+ ++ +P T P ASS +S LS++P + +S ++ +R
Sbjct: 1674 PAEGTSMPTSTYTEGRTPLTSITVRTTPVASSAISTLSTTP----VDNSTPVTTSTEARS 1729
Query: 371 RP-SSTGPPLPPASPSATSRRPSSLRISPSLGASGGAS 407
P +S G +P ++PS + +S+ +S + S AS
Sbjct: 1730 SPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVLSSEAS 1767
Score = 49.3 bits (116), Expect = 2e-05
Identities = 93/407 (22%), Positives = 152/407 (37%), Gaps = 60/407 (14%)
Query: 23 SQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPAT-------SPIGASG-VAH 74
S+ +TPLTS + P +A+S G + V TP T SP A G V
Sbjct: 2806 SETSTPLTSMPVNHTP---VASSEAGTLSTTP--VDTSTPVTTSTKASSSPTTAEGIVVP 2860
Query: 75 RSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDEN 134
S +SEG + L+S P ++ S S ++S VD+ I E
Sbjct: 2861 ISTASEGSTLLTSIPVSTTPVASSEAS--------------TLSTTPVDTSIPVTTSTEG 2906
Query: 135 DRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEV 194
+ P S P ++ V+ + S+LS V
Sbjct: 2907 SSSPTTAEGTSMPISTPSEVSTPLTSILVSTVPVAGSEA-------STLSTTPVDTRTPV 2959
Query: 195 FSDFKDLIGQILMEVLMMSTQTRDEN--PFASLTATSQPIAAA-----ARSP-DRNLLLN 246
+ + E M T E P S++ ++ P+A++ +R+P D + +
Sbjct: 2960 TTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVT 3019
Query: 247 TGSNPGTSPMFC-------SVASFGASSLSSLYESSPA---PTPSFWSSVPVMGPSLASP 296
T + +SP S S G++ L+S+ S+ P S S+ PV S
Sbjct: 3020 TSTEASSSPTTAEGTGIPISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTPV-----DSN 3074
Query: 297 SRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPAL 356
S + V S+P + + S+ S+P T P SS +S LS++P
Sbjct: 3075 SPVVTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVD--- 3131
Query: 357 ASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGAS 403
S+P + +S G +P ++PS S + + +S L S
Sbjct: 3132 TSTPVTTSTEAHSSPTTSEGTSMPTSTPSEGSTPLTYMPVSTMLVVS 3178
Score = 46.6 bits (109), Expect = 2e-04
Identities = 85/402 (21%), Positives = 152/402 (37%), Gaps = 70/402 (17%)
Query: 22 TSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPA--TSPIGASGVAHRSQSS 79
+S+ + T+P N P ++ P + G ++ TP+ ++P+ + V+ + +S
Sbjct: 3236 SSEASILSTTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVAS 3295
Query: 80 EGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREK 139
S+LS++P+ +T + + SQ+ ++ SM G
Sbjct: 3296 SETSTLSTTPA---DTSTPVTTYSQASSSPPIADGTSMPTSTYSEG-------------S 3339
Query: 140 RSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFK 199
L++ S+ P VS E + +S D +S A E S
Sbjct: 3340 TPLTNMSFSTTPVVSSEAST--------LSTTPVDTSTPVTTSTEASLSPTTAEGTS--- 3388
Query: 200 DLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAA-----ARSP-DRNLLLNTGSNPGT 253
+ S+ + P AS+ ++ P+ ++ + +P D N L+ T + +
Sbjct: 3389 ----------IPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASS 3438
Query: 254 SPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPH 313
SP S S+ S E S + S+ PV ++ S + P T SP
Sbjct: 3439 SPTIAEGTSLPTSTTS---EGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPT 3495
Query: 314 SAASGTA--------AGSQPSSPRYRPYTVTHPWASSGVSILSSSP--------SPPALA 357
+++ TA + S+P T P ASS S LS++P S +
Sbjct: 3496 NSSPTTAEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQAS 3555
Query: 358 SSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
SSP + ++ R S G S S T+ SS ++ S
Sbjct: 3556 SSPATLQVTTMRMSTPSEG------SSSLTTMLLSSTYVTSS 3591
Score = 46.2 bits (108), Expect = 2e-04
Identities = 95/430 (22%), Positives = 158/430 (36%), Gaps = 58/430 (13%)
Query: 23 SQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPA--TSPIGASGVAHRSQSSE 80
S+ +T T+P N P ++ P + G ++ TP+ ++P+ V+ +S
Sbjct: 998 SEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASS 1057
Query: 81 GVSSLSSSPSN-SLETQSQSLSRSQSMDIDGVSCEKS----------------------- 116
S+LS++P++ S + S + S S DG S S
Sbjct: 1058 ETSTLSTTPADTSTPVTTYSQASSSSTTADGTSMPTSTYSEGSTPLTSVPVSTRLVVSSE 1117
Query: 117 ---MSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGP-EVSEEQALQLVCKIFRVSWKD 172
+S VD+ I E + P+S P E + A V VS +
Sbjct: 1118 ASTLSTTPVDTSIPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTLVVSSE- 1176
Query: 173 RDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDEN--PFASLTATSQ 230
++LS + +V + + EV M T T E P S+
Sbjct: 1177 -------ANTLSTTPVDSKTQVATSTEASSPPPTAEVTSMPTSTPGERSTPLTSMPVRHT 1229
Query: 231 PIAAAARSP------DRNLLLNTGSNPGTSPMFCSVASFGASSLS---SLYESSPAPTPS 281
P+A++ S D + + T + +SP S S+ S +L S P T
Sbjct: 1230 PVASSEASTLSTSPVDTSTPVTTSAETSSSPTTAEGTSLPTSTTSEGSTLLTSIPVSTTL 1289
Query: 282 FWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTV----TH 337
S P L +P + + S + A GT+ + S P T T
Sbjct: 1290 VTS--PEASTLLTTPVDTKGPVVTSNEVSSSPTPAEGTSMPTSTYSEGRTPLTSIPVNTT 1347
Query: 338 PWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRIS 397
ASS +SILS++P S+P + +S G +P ++PS + +S+ +S
Sbjct: 1348 LVASSAISILSTTPVDN---STPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVS 1404
Query: 398 PSLGASGGAS 407
+ S AS
Sbjct: 1405 TTPVVSSEAS 1414
Score = 45.1 bits (105), Expect = 5e-04
Identities = 85/394 (21%), Positives = 156/394 (39%), Gaps = 43/394 (10%)
Query: 22 TSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPA--TSPIGASGVAHRSQSS 79
+S+ +T T+P + P ++ P+ + G ++ P+ T+P+ + V+ S
Sbjct: 2411 SSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVVS 2470
Query: 80 EGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREK 139
+LS++P ++ + S S S + E++ V + E
Sbjct: 2471 SEAGTLSTTPVDTSTPMTTSTEASSS-----------------PTTAEDIVVPISTASEG 2513
Query: 140 RSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFK 199
+L P S V+ +A L + I S+ SA+ P +S+
Sbjct: 2514 STLLTSIPVSTTPVASPEASTLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSE-- 2571
Query: 200 DLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGT---SPM 256
G + + +ST+ P AS A++ S T S+P T + M
Sbjct: 2572 ---GSTPLRSMPVSTK-----PLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSM 2623
Query: 257 FCSVASFGASSLSSLYESS---PAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPH 313
S S ++SL+S+ S+ + S S+ PV +L + S S S+P +
Sbjct: 2624 PISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDTRTLVTTSTGTS-----SSPTTAE 2678
Query: 314 SAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPS 373
++ T+ + S+P T A+S S LS++P S+P A +S +
Sbjct: 2679 GSSMPTSTPGERSTPLTNILVSTTLLANSEASTLSTTPVD---TSTPVTTSAEASSSPTT 2735
Query: 374 STGPPLPPASPSATSRRPSSLRISPSLGASGGAS 407
+ G + ++PS S +S+ +S AS AS
Sbjct: 2736 AEGTSMRISTPSDGSTPLTSILVSTLPVASSEAS 2769
Score = 44.3 bits (103), Expect = 8e-04
Identities = 89/425 (20%), Positives = 161/425 (37%), Gaps = 58/425 (13%)
Query: 23 SQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGV 82
S+ +TPLT N P I ++ S + + V + T T+ AS ++ +
Sbjct: 389 SEGSTPLT-----NMPVSTILVASSEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIA 443
Query: 83 SSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSL 142
+S S S L + S + S + +S S+ V + E E S+
Sbjct: 444 TSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDSKTQVTTSTEASSSPPT--AEVNSM 501
Query: 143 SDKEPSSGPEVSEEQALQLV----CKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDF 198
PS G ++ + + +S D +S A E S
Sbjct: 502 PTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTS-- 559
Query: 199 KDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFC 258
+ ST + P ++ +++ + ++ S T + P S F
Sbjct: 560 -----------IPTSTPSEGSTPLTNMPVSTRLVVSSEAS-------TTSTTPADSNTFV 601
Query: 259 SVASFGASSLSSLYESSPAPTPSF---WSSVPVMGPS--LASPSRAASQLAVP---STPL 310
+ +S ASS S+ E + PT ++ +++ M S L + S A++ P +TP+
Sbjct: 602 TTSS-EASSSSTTAEGTSMPTSTYSERGTTITSMSVSTTLVASSEASTLSTTPVDSNTPV 660
Query: 311 SPHSAASGTAAGSQPSSPRYRPYTV-----------THPWASSGVSILSSSPSPPALASS 359
+ + A+ ++ ++ +S YT T ASS S LS++P S+
Sbjct: 661 TTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLSTTPVD---TST 717
Query: 360 PQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDS----YSDH 415
P +S ++ G +P ++PS S +S+ +S +L S AS + S H
Sbjct: 718 PVTTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTH 777
Query: 416 FTIET 420
T T
Sbjct: 778 ITTST 782
Score = 44.3 bits (103), Expect = 8e-04
Identities = 91/406 (22%), Positives = 142/406 (34%), Gaps = 68/406 (16%)
Query: 26 TTPLTSPQRENPPGPPI-----------AASAPGPSQSLGLNVHNMTPATSPIGASGVAH 74
TTP+ SP+ P+ +S+P P++ + + +P+ + V+
Sbjct: 2111 TTPVASPEASTLSTTPVDSNSPVITSTEVSSSPIPTEGTSMQTSTYSDRRTPLTSMPVST 2170
Query: 75 RSQSSEGVSSLSSSP-SNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDE 133
+S +S+LS++P S + + +RS +G S S
Sbjct: 2171 TVVASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPS-------------- 2216
Query: 134 NDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKE 193
E + P S V +A L S S +A+ P
Sbjct: 2217 ----EGSTPFTSMPVSTMPVVTSEASTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTS 2272
Query: 194 VFSDFKDLIGQILM--------EVLMMSTQTRDEN-PFASLTATSQPIAAAARSPDRNLL 244
S+ + I + EV +ST D N PF + T S P A +
Sbjct: 2273 TLSEGTTPLTSIPVSHTLVANSEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSMPTST 2332
Query: 245 LNTGSNPGTSPMFCS--VASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQ 302
+ G+ P T + VASF S+LS+ +PA T S PV S A
Sbjct: 2333 SSEGNTPLTRMPVSTTMVASFETSTLST----TPADT-----STPVTTYSQAG------- 2376
Query: 303 LAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSP---SPPALASS 359
S+P + + T+ S+ S+P T P SS S S++P S P S+
Sbjct: 2377 ----SSPTTADDTSMPTSTYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVTTST 2432
Query: 360 PQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGG 405
ASSS T P P S T + +P + + G
Sbjct: 2433 ----EASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVVSSEAG 2474
Score = 44.3 bits (103), Expect = 8e-04
Identities = 100/437 (22%), Positives = 169/437 (38%), Gaps = 72/437 (16%)
Query: 23 SQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPA--TSPIGASGVAHRSQS-S 79
S+ +TPLT G P++ + P S ++ + TP ++P+ S AH S + S
Sbjct: 3101 SEGSTPLT--------GVPVSTT---PVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTS 3149
Query: 80 EGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIE-NMEVDENDRRE 138
EG S +S+PS T + S + + S + VD + + + E + E
Sbjct: 3150 EGTSMPTSTPSEG-STPLTYMPVSTMLVVSSEDSTLSATPVDTSTPVTTSTEATSSTTAE 3208
Query: 139 KRSLSDKEPSSGPE------VSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPK 192
S+ PS G VS I + D + + + S+
Sbjct: 3209 GTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTEASSSPPTAEG 3268
Query: 193 EVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTAT----------------SQPIAAAA 236
G + + +ST T + ++L+ T S PIA
Sbjct: 3269 TSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSPPIADGT 3328
Query: 237 RSPDRNLLLNTGSNPGTSPMFCS--VASFGASSLSSL-----------YESSPAPTPSFW 283
P + GS P T+ F + V S AS+LS+ E+S +PT +
Sbjct: 3329 SMPTSTY--SEGSTPLTNMSFSTTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEG 3386
Query: 284 SSVPVMGPS-----LAS------PSRAASQLAVPSTPLSPHS-AASGTAAGSQPSSPRYR 331
+S+P PS LAS P ++ + +TP+ ++ + T A S P+
Sbjct: 3387 TSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGT 3446
Query: 332 PY-TVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRR 390
T T S+ +SI+ S +P +ASS AS+ P T P+ +SP+ +S
Sbjct: 3447 SLPTSTTSEGSTPLSIMPLSTTP--VASS----EASTLSTTPVDTSTPVTTSSPTNSSPT 3500
Query: 391 PSSLRISPSLGASGGAS 407
+ + P+ A G++
Sbjct: 3501 TAEVTSMPTSTAGEGST 3517
Score = 43.5 bits (101), Expect = 0.001
Identities = 82/397 (20%), Positives = 146/397 (36%), Gaps = 51/397 (12%)
Query: 22 TSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPA--TSPIGASGVAHRSQSS 79
+S+ +T T+P + P + P+ + G ++ TP+ T+P+ V+ S
Sbjct: 1999 SSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTTPLAGMPVSTTLVVS 2058
Query: 80 EGVSSLSSSP-------SNSLETQSQSLSRSQSMDIDGVS------CEKSMSQVDV---- 122
++LS++P +NS E S + + SM I S +S V
Sbjct: 2059 SEGNTLSTTPVDSKTQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIPLSTTPVASPE 2118
Query: 123 DSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSS 182
S + VD N ++ E SS P +E ++Q ++ DR + +
Sbjct: 2119 ASTLSTTPVDSN----SPVITSTEVSSSPIPTEGTSMQ------TSTYSDRRTPLTSM-- 2166
Query: 183 LSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRN 242
P I + + ST + S TS+ + +P
Sbjct: 2167 --------PVSTTVVASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEG 2218
Query: 243 LLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQ 302
T T P+ S AS S + + S+P T + +S P + P+ S
Sbjct: 2219 STPFTSMPVSTMPVVTSEAS--TLSATPVDTSTPVTTSTEATSSPTTAEGTSIPT---ST 2273
Query: 303 LAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQA 362
L+ +TPL+ + A S+ S+ P P+ +S + + SPP A
Sbjct: 2274 LSEGTTPLTSIPVSHTLVANSEVSTLSTTPVDSNTPFTTS-----TEASSPPPTAEGTSM 2328
Query: 363 VPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
++SS T +P ++ S S+L +P+
Sbjct: 2329 PTSTSSEGNTPLT--RMPVSTTMVASFETSTLSTTPA 2363
Score = 43.1 bits (100), Expect = 0.002
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 207 MEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGAS 266
+ L++ST P AS+ +T + +P + +T + P + + SV + G++
Sbjct: 3876 LTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPSTDTA-STPTIPVATTISVSVITEGST 3934
Query: 267 SLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPS 326
++++ S T S P ++++P +++L PST S++S T + S
Sbjct: 3935 PGTTIFIPSTPVTSSTADVFPATTGAVSTPVITSTELNTPST-----SSSSTTTSFSTTK 3989
Query: 327 SPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSA 386
T P +S S+P + + A S++ +ST P +PS+
Sbjct: 3990 EFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSVTTRPVTPSS 4049
Query: 387 TSRRPSSL 394
S RPS++
Sbjct: 4050 ESSRPSTI 4057
Score = 42.4 bits (98), Expect = 0.003
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 22/216 (10%)
Query: 208 EVLMMSTQTRDEN--PFASLTATSQPIAAAARSP------DRNLLLNTGSNPGTSPMFCS 259
EV M T T E P S+ P+A++ D + + T + +SP +
Sbjct: 2796 EVTSMPTSTPSETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSP---T 2852
Query: 260 VASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGT 319
A +S+ E S T S+ PV ++ S ++P T + S++ T
Sbjct: 2853 TAEGIVVPISTASEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTT 2912
Query: 320 AAG--------SQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQR 371
A G S+ S+P T P A S S LS++P +P A +S
Sbjct: 2913 AEGTSMPISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVD---TRTPVTTSAEASSSP 2969
Query: 372 PSSTGPPLPPASPSATSRRPSSLRISPSLGASGGAS 407
++ G +P ++P +S+ +S AS AS
Sbjct: 2970 TTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEAS 3005
Score = 42.4 bits (98), Expect = 0.003
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 13/206 (6%)
Query: 212 MSTQTRDENPFASLTATSQPIAAAARSP------DRNLLLNTGSNPGTSPMFCSVASFGA 265
+ST + P S+ ++ P+A S D N + T + +SP S
Sbjct: 3038 ISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPI 3097
Query: 266 SSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVP-STPLSPHSAASGTAAGSQ 324
S+ S E S T S+ PV ++++ S + P +T HS+ + + S
Sbjct: 3098 STYS---EGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSM 3154
Query: 325 PSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSST---GPPLPP 381
P+S T S + ++SS S + + P ++S + SST G +P
Sbjct: 3155 PTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTSTPVTTSTEATSSTTAEGTSIPT 3214
Query: 382 ASPSATSRRPSSLRISPSLGASGGAS 407
++PS +S+ +S + AS AS
Sbjct: 3215 STPSEGMTPLTSVPVSNTPVASSEAS 3240
Score = 41.6 bits (96), Expect = 0.005
Identities = 48/204 (23%), Positives = 77/204 (37%), Gaps = 30/204 (14%)
Query: 213 STQTRDENPFASLTATSQPIAAAARSPDRNLLL-NTGSNPGTSPMF------CSVASFGA 265
ST T T S + +P + + +T T+ +F S +
Sbjct: 3909 STDTASTPTIPVATTISVSVITEGSTPGTTIFIPSTPVTSSTADVFPATTGAVSTPVITS 3968
Query: 266 SSLSSLYESSPAPTPSFWSSVPVMGPSL--ASPSRAASQLAVPSTPLS------------ 311
+ L++ SS + T SF ++ P++ A+P + PSTP +
Sbjct: 3969 TELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTL 4028
Query: 312 -----PHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASS----PQA 362
PH++ S T PSS RP T+T SS P ASS P+A
Sbjct: 4029 SATSTPHTSTSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTSASSTTVNPEA 4088
Query: 363 VPASSSRQRPSSTGPPLPPASPSA 386
V ++R +PS+ P + +A
Sbjct: 4089 VTTMTTRTKPSTRTTSFPTVTTTA 4112
Score = 41.2 bits (95), Expect = 0.007
Identities = 98/448 (21%), Positives = 168/448 (37%), Gaps = 66/448 (14%)
Query: 22 TSQPTTPLT---SPQRENPPGPPIAASAPGPSQSLGLNVHNMTPAT-------SPIGASG 71
TS PT+ T +P P + AS+ + S V TP T SP A G
Sbjct: 676 TSMPTSTYTEGSTPLTSMPVNTTLVASSEASTLST-TPVDTSTPVTTSTEASSSPTTADG 734
Query: 72 VAH-RSQSSEGVSSLSSSP-SNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENM 129
+ S SEG + L+S P S +L T S++ + S + S + E
Sbjct: 735 ASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGT 794
Query: 130 EVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQ 189
+ + E L P S V+ +A L + + S A+
Sbjct: 795 SMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTS 854
Query: 190 NPKEVFSDFKDLIGQILMEVLMMSTQ---TRDENPFASLT------------ATSQPIAA 234
P +S+ + + + + +++T T P + T TS+ +
Sbjct: 855 MPTSTYSEGRTPLTSMPVSTTLVATSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSM 914
Query: 235 AARSPDRNLLLNTGSNPGTSPMFCSVASFGASS-------LSSLYESSPAPTPSFWSSVP 287
+P T T+P+ S A +++ +++ E++ +PT + +S+P
Sbjct: 915 PTSTPGEGSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIP 974
Query: 288 VMGPS--------------LASPSRAASQLAVP---STPLSPHSAASG-----------T 319
PS L + S A++ P +TPL+ + AS T
Sbjct: 975 TSTPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPT 1034
Query: 320 AAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPL 379
+ S+ S+P R T ASS S LS++ PA S+P + +S ++ G +
Sbjct: 1035 STPSEGSTPLTRMPVSTTMVASSETSTLSTT---PADTSTPVTTYSQASSSSTTADGTSM 1091
Query: 380 PPASPSATSRRPSSLRISPSLGASGGAS 407
P ++ S S +S+ +S L S AS
Sbjct: 1092 PTSTYSEGSTPLTSVPVSTRLVVSSEAS 1119
Score = 39.7 bits (91), Expect = 0.019
Identities = 89/449 (19%), Positives = 160/449 (35%), Gaps = 102/449 (22%)
Query: 26 TTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQS-SEGVSS 84
TT + S + + P S P + S ++SP A G + ++ + SEG +
Sbjct: 1523 TTTVASSEINSLSTTPAVTSTPVTTYSQA--------SSSPTTADGTSMQTSTYSEGSTP 1574
Query: 85 LSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSD 144
L+S P +++ S + + ID + + ++ + E + + E L
Sbjct: 1575 LTSLPVSTMLVVSSEANTLSTTPIDSKTQVTASTEASSSTTAEGSSMTISTPSEGSPLLT 1634
Query: 145 KEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQ 204
P S V+ +A L S D + ++S P E S
Sbjct: 1635 SIPVSTTPVASPEASTL-------STTPVDSNSPVITSTEVSSSPTPAEGTS-------- 1679
Query: 205 ILMEVLMMSTQTRDENPFASLTATSQPIAAAARSP------------------------- 239
+ ST T P S+T + P+A++A S
Sbjct: 1680 -----MPTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTS 1734
Query: 240 DRNLLLNTGSNPGTSPMFC------SVASFGASSLSSL-----------YESSPAPTPSF 282
+ + N+ + GT+P+ V S AS+LS+ E++ +PT +
Sbjct: 1735 EGTSMPNSTPSEGTTPLTSIPVSTTPVLSSEASTLSATPIDTSTPVTTSTEATSSPTTAE 1794
Query: 283 WSSVPV------MGPSLASP----------------------SRAASQLAVPSTPLSPHS 314
+S+P M P ++P S + AV S+P
Sbjct: 1795 GTSIPTSTLSEGMTPLTSTPVSHTLVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEG 1854
Query: 315 AASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSS 374
+ T+ S+ S+ T ASS + LS++ PA+ S+P A S ++
Sbjct: 1855 TSIATSTPSEGSTALTSIPVSTTTVASSETNTLSTT---PAVTSTPVTTYAQVSSSPTTA 1911
Query: 375 TGPPLPPASPSATSRRPSSLRISPSLGAS 403
G +P ++P +S+ +S + AS
Sbjct: 1912 DGSSMPTSTPREGRPPLTSIPVSTTTVAS 1940
Score = 39.3 bits (90), Expect = 0.025
Identities = 84/431 (19%), Positives = 163/431 (37%), Gaps = 70/431 (16%)
Query: 26 TTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPA--TSPIGASGVAHRSQSSEGVS 83
TTP+ S + AS+P P+ + ++ TP ++P+ + V H +S S
Sbjct: 1182 TTPVDS---KTQVATSTEASSPPPTAEV-TSMPTSTPGERSTPLTSMPVRHTPVASSEAS 1237
Query: 84 SLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLS 143
+LS+SP ++ + S S S + E + + E +L
Sbjct: 1238 TLSTSPVDTSTPVTTSAETSSS-----------------PTTAEGTSLPTSTTSEGSTLL 1280
Query: 144 DKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIG 203
P S V+ +A L+ + + S A+ P +S+ + +
Sbjct: 1281 TSIPVSTTLVTSPEASTLLTTPVDTKGPVVTSNEVSSSPTPAEGTSMPTSTYSEGRTPLT 1340
Query: 204 QILMEVLMMSTQT---RDENPFASLT--ATSQPIAAAARSPDRNLLLNTGSNPGTSPMFC 258
I + ++++ P + T TS ++ + + + N+ + GT+P+
Sbjct: 1341 SIPVNTTLVASSAISILSTTPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTS 1400
Query: 259 ------SVASFGASSLSS--LYESSPAPTPSFWSSVPVMGPSLASPSRAASQ-------L 303
V S AS+LS+ + S+P T + +S P ++ P+ S+ +
Sbjct: 1401 IPVSTTPVVSSEASTLSATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEGKTPLKSI 1460
Query: 304 AVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTH-PWASSGVSILSSSPSP--------- 353
V +TP++ A++ + +SP V+ P + G SI S+PS
Sbjct: 1461 PVSNTPVANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIAISTPSEGSTALTSIP 1520
Query: 354 -----------------PALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRI 396
PA+ S+P + +S ++ G + ++ S S +SL +
Sbjct: 1521 VSTTTVASSEINSLSTTPAVTSTPVTTYSQASSSPTTADGTSMQTSTYSEGSTPLTSLPV 1580
Query: 397 SPSLGASGGAS 407
S L S A+
Sbjct: 1581 STMLVVSSEAN 1591
Score = 38.9 bits (89), Expect = 0.032
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 213 STQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLY 272
ST + P S+ ++ P+ ++ S ++T S P T+ S + A +S+
Sbjct: 2390 STYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDT-STPVTTSTEASSSPTTAEG-TSIP 2447
Query: 273 ESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVP---STPLSPHSAASGTAAGSQPSSPR 329
S P+ + +S+PV + S S A + P STP++ + T A S P++
Sbjct: 2448 TSPPSEGTTPLASMPVSTTPVVS-SEAGTLSTTPVDTSTPMT-----TSTEASSSPTTAE 2501
Query: 330 YRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSR 389
V AS G ++L+S P +SP+A S++ +S S SATS
Sbjct: 2502 --DIVVPISTASEGSTLLTSIPVSTTPVASPEASTLSTTPVDSNSPVVTSTEISSSATSA 2559
Query: 390 RPSSLRIS 397
+S+ S
Sbjct: 2560 EGTSMPTS 2567
Score = 38.5 bits (88), Expect = 0.042
Identities = 104/452 (23%), Positives = 166/452 (36%), Gaps = 85/452 (18%)
Query: 23 SQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPAT-------SPIGASGVA-H 74
S+ +TPLTS P AS + V TP T SP A G +
Sbjct: 2393 SEGSTPLTSVPVSTMPVVSSEASTHSTTP-----VDTSTPVTTSTEASSSPTTAEGTSIP 2447
Query: 75 RSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDG-----VSCEKSMSQVDVDSGIENM 129
S SEG + L+S P ++ S + +D S E S S E++
Sbjct: 2448 TSPPSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTA----EDI 2503
Query: 130 EVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQ 189
V + E +L P S V+ +A L + I S+ SA+
Sbjct: 2504 VVPISTASEGSTLLTSIPVSTTPVASPEASTLSTTPVDSNSPVVTSTEISSSATSAEGTS 2563
Query: 190 NPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTAT----SQPIAAAARSPDRNLLL 245
P +S+ G + + +ST+ + ++L+ T S P+ + +
Sbjct: 2564 MPTSTYSE-----GSTPLRSMPVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTA 2618
Query: 246 NTGSNPGTSPMFCS------------VASFGASSLSSL-----------YESSPAPTPSF 282
S P ++P S VAS AS+LS+ +S +PT +
Sbjct: 2619 KDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDTRTLVTTSTGTSSSPTTAE 2678
Query: 283 WSSVPVMGP--------------SLASPSRAASQLAVP---STPLSPHSAASG---TAAG 322
SS+P P +L + S A++ P STP++ + AS TA G
Sbjct: 2679 GSSMPTSTPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSPTTAEG 2738
Query: 323 --------SQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSS 374
S S+P T P ASS S +S++ S P +S ++
Sbjct: 2739 TSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVD---TSIPVTTSTEASSSPTTA 2795
Query: 375 TGPPLPPASPSATSRRPSSLRISPSLGASGGA 406
+P ++PS TS +S+ ++ + AS A
Sbjct: 2796 EVTSMPTSTPSETSTPLTSMPVNHTPVASSEA 2827
Score = 36.6 bits (83), Expect = 0.16
Identities = 77/391 (19%), Positives = 140/391 (35%), Gaps = 52/391 (13%)
Query: 26 TTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSL 85
TTP+ S + P+ S P + S N +P T+ + + S + EG + L
Sbjct: 3467 TTPVASSEASTLSTTPVDTSTPVTTSS----PTNSSPTTAEVTSMPT---STAGEGSTPL 3519
Query: 86 SSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSG---IENMEVDENDRREKRSL 142
++ P ++ S S + +D + S SQ + M + SL
Sbjct: 3520 TNMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSS-SL 3578
Query: 143 SDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLI 202
+ SS S E + + DR +S + P EV +
Sbjct: 3579 TTMLLSSTYVTSSEASTPSTPSV--------DRSTPVTTSTQSNSTPTPPEVIT------ 3624
Query: 203 GQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVAS 262
L MST + P + ++ + + L ++T + TS S
Sbjct: 3625 -------LPMSTPSEVSTPLTIMPVSTTSVTISEAGTASTLPVDTSTPVITSTQVSSSPV 3677
Query: 263 FGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAG 322
+ ++ S TP V + + S ++ V STP++ + A ++A
Sbjct: 3678 TPEGTTMPIWTPSEGSTPLTTMPVSTTRVTSSEGSTLSTPSVVTSTPVTTSTEAISSSAT 3737
Query: 323 SQPSSPRYRPYTVTHPWASS--GVSIL-----------SSSPSPPALASSPQAVPASSSR 369
++ +V+ P S G +IL SS+PS P++ +S AS
Sbjct: 3738 LDSTT-----MSVSMPMEISTLGTTILVSTTPVTRFPESSTPSIPSVYTSMSMTTASEGS 3792
Query: 370 QRPSST--GPPLPPASPSATSRRPSSLRISP 398
P++ +P ++ S S +++ ISP
Sbjct: 3793 SSPTTLEGTTTMPMSTTSERSTLLTTVLISP 3823
Score = 34.7 bits (78), Expect = 0.61
Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 17/197 (8%)
Query: 221 PFASLTATSQPIAAAARSP-DRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPT 279
P ++ S + + +P D N + T + +SP + + G S +S Y P
Sbjct: 2108 PLSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSP----IPTEGTSMQTSTYSDRRTPL 2163
Query: 280 PSFWSSVPVMGPSLASP---------SRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRY 330
S S V+ S S + + S+P + + T+ S+ S+P
Sbjct: 2164 TSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFT 2223
Query: 331 RPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRR 390
T P +S S LS++P S+P ++ ++ G +P ++ S +
Sbjct: 2224 SMPVSTMPVVTSEASTLSATPVD---TSTPVTTSTEATSSPTTAEGTSIPTSTLSEGTTP 2280
Query: 391 PSSLRISPSLGASGGAS 407
+S+ +S +L A+ S
Sbjct: 2281 LTSIPVSHTLVANSEVS 2297
>gi|149408144 TOX high mobility group box family member 2 isoform a
[Homo sapiens]
Length = 506
Score = 53.1 bits (126), Expect = 2e-06
Identities = 96/402 (23%), Positives = 145/402 (36%), Gaps = 79/402 (19%)
Query: 38 PGPPIAASAPGPSQSLGLNVHNMTPATSPIGA-SGVAHRSQSSEGVSSLSSSPSNSLETQ 96
PGP + A S L+ + S +G S +AH S S G S + SPS+S + +
Sbjct: 154 PGPLLGRPAMLASHMSALSQSQLI---SQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEE 210
Query: 97 SQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEE 156
+ +S EK S D G + +N +++K+ K+P+ +
Sbjct: 211 ESEVHFK-------ISGEKRPS---ADPG----KKAKNPKKKKK----KDPNEPQKPVSA 252
Query: 157 QALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFK-------DLIGQILMEV 209
AL F + +A QNP F D D +G+ +
Sbjct: 253 YAL------------------FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQA 294
Query: 210 LMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTS------PMFC--SVA 261
T+ + +L A + + + SPD+ +T +NP PM+ +A
Sbjct: 295 YKRKTEAAKKEYLKALAAYRASLVSKS-SPDQGETKSTQANPPAKMLPPKQPMYAMPGLA 353
Query: 262 SFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAA 321
SF S + S +P S +G P +AS PS PLSP
Sbjct: 354 SFLTPSDLQAFRSGASPA----SLARTLGSKSLLPGLSASPPPPPSFPLSP-------TL 402
Query: 322 GSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPP 381
Q S P + + P S +S +P PP L + P + Q S PP P
Sbjct: 403 HQQLSLPPHAQGALLSPPVS-----MSPAPQPPVLPT-----PMALQVQLAMSPSPPGPQ 452
Query: 382 ASPSATSRRPSSLRISPSLGASGGASNWDSY--SDHFTIETC 421
P + SS SP + +WDS S I TC
Sbjct: 453 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTC 494
>gi|149408141 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 53.1 bits (126), Expect = 2e-06
Identities = 96/402 (23%), Positives = 145/402 (36%), Gaps = 79/402 (19%)
Query: 38 PGPPIAASAPGPSQSLGLNVHNMTPATSPIGA-SGVAHRSQSSEGVSSLSSSPSNSLETQ 96
PGP + A S L+ + S +G S +AH S S G S + SPS+S + +
Sbjct: 112 PGPLLGRPAMLASHMSALSQSQLI---SQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEE 168
Query: 97 SQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEE 156
+ +S EK S D G + +N +++K+ K+P+ +
Sbjct: 169 ESEVHFK-------ISGEKRPS---ADPG----KKAKNPKKKKK----KDPNEPQKPVSA 210
Query: 157 QALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFK-------DLIGQILMEV 209
AL F + +A QNP F D D +G+ +
Sbjct: 211 YAL------------------FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQA 252
Query: 210 LMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTS------PMFC--SVA 261
T+ + +L A + + + SPD+ +T +NP PM+ +A
Sbjct: 253 YKRKTEAAKKEYLKALAAYRASLVSKS-SPDQGETKSTQANPPAKMLPPKQPMYAMPGLA 311
Query: 262 SFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAA 321
SF S + S +P S +G P +AS PS PLSP
Sbjct: 312 SFLTPSDLQAFRSGASPA----SLARTLGSKSLLPGLSASPPPPPSFPLSP-------TL 360
Query: 322 GSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPP 381
Q S P + + P S +S +P PP L + P + Q S PP P
Sbjct: 361 HQQLSLPPHAQGALLSPPVS-----MSPAPQPPVLPT-----PMALQVQLAMSPSPPGPQ 410
Query: 382 ASPSATSRRPSSLRISPSLGASGGASNWDSY--SDHFTIETC 421
P + SS SP + +WDS S I TC
Sbjct: 411 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTC 452
>gi|14249636 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 53.1 bits (126), Expect = 2e-06
Identities = 96/402 (23%), Positives = 145/402 (36%), Gaps = 79/402 (19%)
Query: 38 PGPPIAASAPGPSQSLGLNVHNMTPATSPIGA-SGVAHRSQSSEGVSSLSSSPSNSLETQ 96
PGP + A S L+ + S +G S +AH S S G S + SPS+S + +
Sbjct: 112 PGPLLGRPAMLASHMSALSQSQLI---SQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEE 168
Query: 97 SQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEE 156
+ +S EK S D G + +N +++K+ K+P+ +
Sbjct: 169 ESEVHFK-------ISGEKRPS---ADPG----KKAKNPKKKKK----KDPNEPQKPVSA 210
Query: 157 QALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFK-------DLIGQILMEV 209
AL F + +A QNP F D D +G+ +
Sbjct: 211 YAL------------------FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQA 252
Query: 210 LMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTS------PMFC--SVA 261
T+ + +L A + + + SPD+ +T +NP PM+ +A
Sbjct: 253 YKRKTEAAKKEYLKALAAYRASLVSKS-SPDQGETKSTQANPPAKMLPPKQPMYAMPGLA 311
Query: 262 SFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAA 321
SF S + S +P S +G P +AS PS PLSP
Sbjct: 312 SFLTPSDLQAFRSGASPA----SLARTLGSKSLLPGLSASPPPPPSFPLSP-------TL 360
Query: 322 GSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPP 381
Q S P + + P S +S +P PP L + P + Q S PP P
Sbjct: 361 HQQLSLPPHAQGALLSPPVS-----MSPAPQPPVLPT-----PMALQVQLAMSPSPPGPQ 410
Query: 382 ASPSATSRRPSSLRISPSLGASGGASNWDSY--SDHFTIETC 421
P + SS SP + +WDS S I TC
Sbjct: 411 DFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYPSGECGISTC 452
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 53.1 bits (126), Expect = 2e-06
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 17/151 (11%)
Query: 273 ESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTP--LSPHSAASGTAAGSQPSSPRY 330
++SPAP P ++ P+ GP +S Q + +P SPH PS P
Sbjct: 753 QASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPT-------RPPSRPPS 805
Query: 331 RPYTVTHPWASSGVSILSSSPSPPAL-----ASSPQAVPASSSRQRPSSTGPPLPPASPS 385
RP +V+ P + + +PP L + VP +S P++ GPP PP P
Sbjct: 806 RPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQ 865
Query: 386 ATSRR---PSSLRISPSLGASGGASNWDSYS 413
+ P + + PS +S AS+ ++ S
Sbjct: 866 SQPPEGPLPPAPHLPPSSTSSAVASSSETSS 896
Score = 38.9 bits (89), Expect = 0.032
Identities = 38/163 (23%), Positives = 61/163 (37%), Gaps = 18/163 (11%)
Query: 276 PAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTV 335
P P P + V P+L P + + + + A G A Q S T
Sbjct: 936 PPPPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPAAPQTS-------TS 988
Query: 336 THPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTG-PPLPPASPSATSRRPSSL 394
P S S+L S +P ++P PA + ++TG PPL PA A + +L
Sbjct: 989 LGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPM---AATGLPPLLPAENKAFASNLPTL 1045
Query: 395 RISPSLGASGGASNWDSYSDHF-------TIETCKETDMLNYL 430
++ + + G + Y T++ KE L +L
Sbjct: 1046 NVAKAASSGPGKPSGLQYESKLSGLKKPPTLQPSKEACFLEHL 1088
Score = 32.7 bits (73), Expect = 2.3
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 33/148 (22%)
Query: 289 MGPSLASPSRAASQLAVPSTPLSPHSAAS-----GTAAGSQPSSPRYRPYTVTHPWASSG 343
+GP LA S A S + + P+ A AAGS P+ + P G
Sbjct: 526 LGPVLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPAGPAATTVLQG 585
Query: 344 VSILSSS------------PSPPALAS-----------SPQAVPASSSR-----QRPSST 375
V++ S+ P+ PA A+ +PQA PA S+ Q+P +
Sbjct: 586 VTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQ 645
Query: 376 GPPLPPASPSATSRRPSSLRISPSLGAS 403
PP P +A + ++ + SP L +S
Sbjct: 646 QPPQAPTPQAAAPPQATTPQPSPGLASS 673
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 51.6 bits (122), Expect = 5e-06
Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 251 PGTSPMFCSVASF--GASSLSSLYESSPAPT---------PSFWSSVPVMGPSLASPSRA 299
P SP+ S ASF G+S ES+P P+ PSF S + +L+ A
Sbjct: 534 PAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTA 593
Query: 300 ASQLAVPST-----PLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSS-PSP 353
A+ S+ P+SP S+AS AA S P P ++ P S V + SS PSP
Sbjct: 594 AATSTPVSSSQSAPPMSPFSSASKPAA----SGPLSHPTPLSAP--PSSVPLKSSVLPSP 647
Query: 354 PALASSPQAVPASSSRQR-PSSTGPPLPPASPSATSRRPS 392
++ + P S Q+ P T P P SP A S +P+
Sbjct: 648 SGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQPA 687
Score = 45.4 bits (106), Expect = 3e-04
Identities = 96/402 (23%), Positives = 148/402 (36%), Gaps = 68/402 (16%)
Query: 19 GGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQ----SLGLNVHNMTPATSPIGASGVAH 74
G Q + T P ++P PP A+ P P+ S G + + T + P+ A
Sbjct: 1442 GSQQTNSTVPPSAP-------PPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTE 1494
Query: 75 RSQSSE-----GVSSLSSSPSNSLETQ-SQSLSRSQSMDIDGVSCEKSMSQVDVD----- 123
+ SS G S +S+S ++ LE Q S L ++ D V E ++Q V
Sbjct: 1495 EATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTA 1554
Query: 124 -SGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSS 182
S + + + D + P S F V + S+
Sbjct: 1555 ASSTSLVALSAEATPATTGVPDARTEAVPPASS----------FSVPGQTAVTAAAISSA 1604
Query: 183 LSAQFKQNPKEVFSDFKDLIGQ-ILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDR 241
+ + + S ++ E T T + FA QP AA++ S
Sbjct: 1605 GPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFA------QPPAASSSSAFN 1658
Query: 242 NLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAAS 301
L NT + P +P+F VA+ A SL S A T + A+P ++S
Sbjct: 1659 QLTNNTATAPSATPVFGQVAASTAPSLFGQQTGSTAST------------AAATPQVSSS 1706
Query: 302 QLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQ 361
+ P A GT A + +V ASS S+ S S P +S P
Sbjct: 1707 GFSSP---------AFGTTAPGVFGQTTFGQASVFGQSASSAASVFSF--SQPGFSSVPA 1755
Query: 362 -AVPASSSRQRPSST-GPPLPPASPSATSRRPSSLRISPSLG 401
PASS+ P+ST G AS +++S S + SP+ G
Sbjct: 1756 FGQPASST---PTSTSGSVFGAASSTSSSSSFSFGQSSPNTG 1794
Score = 36.2 bits (82), Expect = 0.21
Identities = 52/208 (25%), Positives = 79/208 (37%), Gaps = 24/208 (11%)
Query: 223 ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSF 282
+S T S P++A RS + PG S + S AS S+ +P T
Sbjct: 1478 SSATTPSLPMSAG-RSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDS 1536
Query: 283 WSSVPVMG-PSLASPSRAASQL--------AVPST------------PLSPHSAASGTA- 320
PV+ P++++ AAS A P+T P S S TA
Sbjct: 1537 VKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVPGQTAV 1596
Query: 321 -AGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPL 379
A + S+ T + P ASS SI++ PS A A +S Q P+++
Sbjct: 1597 TAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSA 1656
Query: 380 PPASPSATSRRPSSLRISPSLGASGGAS 407
+ T+ PS+ + + AS S
Sbjct: 1657 FNQLTNNTATAPSATPVFGQVAASTAPS 1684
Score = 35.8 bits (81), Expect = 0.27
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 246 NTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAV 305
+T + P +S + + A++ +SL SSPA + +S +P G ++S +
Sbjct: 433 STPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSS 492
Query: 306 PSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPA 365
+ P S +SG+ + P ++ P +S ++SP P+ AS
Sbjct: 493 ATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAAS----FSF 548
Query: 366 SSSRQRPSSTGPPLPPASPSATSRRPS 392
SS +P+ P+P S + +PS
Sbjct: 549 GSSGFKPTLESTPVPSVSAPNIAMKPS 575
Score = 35.8 bits (81), Expect = 0.27
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 24/169 (14%)
Query: 224 SLTATSQPIAA--AARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPS 281
S T P+ AA + L+N+ G +P ++S +S ++ E++ TPS
Sbjct: 1146 STAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPS 1205
Query: 282 FWSSVPVMGPSLASPSRA----------------ASQLAVPSTPLSPHSAASGTAAGSQP 325
+S P SPS A+Q A PST S A + GS+P
Sbjct: 1206 --ASGQFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKP 1263
Query: 326 SSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSS 374
S Y + P S S +++P PA +SS P+ ++ SS
Sbjct: 1264 S---YEAIPESSP-PSGITSASNTTPGEPAASSSRPVAPSGTALSTTSS 1308
Score = 33.5 bits (75), Expect = 1.4
Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 30/220 (13%)
Query: 223 ASLTATSQPIAAAAR--SPDRNLLLNTGSNPGTSPMFCSVASFGAS-------SLSSLY- 272
AS T +P A+++R +P L T S T P F +S S S L
Sbjct: 1280 ASNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSFSGLRV 1339
Query: 273 ---ESSPAPT------------PSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAAS 317
+ S PT P+ S VP G + +P P T + ++ +
Sbjct: 1340 GQADDSTKPTNKASSTSLTSTQPTKTSGVP-SGFNFTAPPVLGKHTEPPVTSSATTTSVA 1398
Query: 318 GTAAGSQPSSPRYRPYTVTHPWASSGVSI----LSSSPSPPALASSPQAVPASSSRQRPS 373
AA S S+ + VT +S +S LS+ + + S S P+
Sbjct: 1399 PPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPT 1458
Query: 374 STGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYS 413
+ PLP + P+ + S +PSL S G S ++ S
Sbjct: 1459 TAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATS 1498
Score = 31.2 bits (69), Expect = 6.8
Identities = 44/204 (21%), Positives = 75/204 (36%), Gaps = 22/204 (10%)
Query: 215 QTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNP--GTSPMFCSVASF--------- 263
+T E+ SL ++ ++ RN L + P T+P S ++F
Sbjct: 922 KTTIESHTKSLPKVPAKLSPMKQAQLRNFLAKRKTPPVRSTAPASLSRSAFLSQRYYEDL 981
Query: 264 ----GASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAAS---QLAVPSTPLSPHSAA 316
SS+S ES A T V P A R S L + P +
Sbjct: 982 DEVSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHLV 1041
Query: 317 SGTAAGSQPSSPRYRPYTVTHPWASSGV----SILSSSPSPPALASSPQAVPASSSRQRP 372
G++ G +S + A S + ++ +PSP S+PQA A++ R++
Sbjct: 1042 HGSSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQM 1101
Query: 373 SSTGPPLPPASPSATSRRPSSLRI 396
+S P + + S P + +
Sbjct: 1102 ASQAPAVNTLTESTLKNVPQVVNV 1125
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 51.6 bits (122), Expect = 5e-06
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 26/207 (12%)
Query: 219 ENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSP-- 276
+ P +L++ P+ A+ + + +P T+ + GA + S++ SP
Sbjct: 818 DTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKG 877
Query: 277 -------APTPSFWS--------------SVPVMGPSLASPSRAASQLAVPSTPLSPHSA 315
PTPS + P + + +SP +A + A P SP
Sbjct: 878 VTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPK 937
Query: 316 ASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSST 375
+ T + P SP+ P T + WA + + SP SP+ P + PS
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997
Query: 376 GPPLPPA---SPSATSRRPSSLRISPS 399
G P P+ +P+ + P S + SP+
Sbjct: 998 GGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Score = 45.4 bits (106), Expect = 3e-04
Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 27/199 (13%)
Query: 224 SLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFW 283
+L A + P + + P + T S+P +P + A GA +L ++ SSP P+
Sbjct: 1466 TLPAVTPP---SPKEPPAPKQVATSSSPKKAP--ATPAPMGAPTLPAVIPSSPKEVPATP 1520
Query: 284 SSV--PVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWAS 341
SS P+ + + + LA + P +P+ P T + AS
Sbjct: 1521 SSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEAS 1580
Query: 342 SGVSILSSS----PSP-------------PALASSPQAVPASSSRQRPSSTGPPLPPASP 384
S ++ S+ PSP P A +P AV S + P++ P P SP
Sbjct: 1581 SPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSP 1640
Query: 385 SATSRRPSSLRISPSLGAS 403
T PSSL+ SP+ AS
Sbjct: 1641 PVT---PSSLKDSPTSPAS 1656
Score = 42.7 bits (99), Expect = 0.002
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 277 APTP-SFWSSVPVMGPSLASPSRAASQLAV--PST---PLSPHSAASGTAAGSQPSSPRY 330
APTP + P GP+ SP A + A PS P +P + T + P SP+
Sbjct: 939 APTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKG 998
Query: 331 RPYTVTHPWASSGVSILSSSP--SPPAL-----ASSPQAVPASSSRQRPSSTGPPLP--- 380
P T + A + ++ SP SP A AS+P A S + P++T PLP
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAT--PLPKGA 1056
Query: 381 PASPSATSRRPSSLRISPSL 400
P +P+AT P +PSL
Sbjct: 1057 PTTPAATLPSPKGGPATPSL 1076
Score = 40.4 bits (93), Expect = 0.011
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 12/137 (8%)
Query: 277 APTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVT 336
APTP ++ P + LA+P + TP SP + + P+ P P +
Sbjct: 1263 APTPPA-ATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS-- 1319
Query: 337 HPWASSGVSILSSSPSPPALAS-SPQAVPASSSRQRPSSTGPPLPPAS------PSATSR 389
P S G +P+PPA+ SP+ P + PSS G P P+S P+AT
Sbjct: 1320 -PKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATT-PSSKGGPTTPSSKEGPTPPAATPS 1377
Query: 390 RPSSLRISPSLGASGGA 406
++P G A
Sbjct: 1378 HKGGPAMTPPSPKRGPA 1394
Score = 39.7 bits (91), Expect = 0.019
Identities = 45/186 (24%), Positives = 68/186 (36%), Gaps = 16/186 (8%)
Query: 233 AAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPS 292
AA SP L + T+P A+ S L SP P+ ++ P
Sbjct: 1176 AATPPSPKGGLATPSPKGAPTTP-----AATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230
Query: 293 -LASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRP-------YTVTHPWASSGV 344
LA+PS + +TP SP + P+ P P T H A +
Sbjct: 1231 GLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPA 1290
Query: 345 SILSSSPSPPALASSPQAVPASSSRQRPSSTGP---PLPPASPSATSRRPSSLRISPSLG 401
+ SP S P+ P + PS G P P +P+ + P S + +P+L
Sbjct: 1291 VVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP 1350
Query: 402 ASGGAS 407
A+ +S
Sbjct: 1351 ATTPSS 1356
Score = 38.9 bits (89), Expect = 0.032
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 230 QPIAAAARSPDRNLLLNTGS--NPG-TSPMFCSVASFGASSLSSLYESSPAPTPSFWSSV 286
QP A A P + L T + PG T P CS A LS+ ++SP P+PS +S
Sbjct: 18 QPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAP-QQCPLSAANQASPFPSPSTIAST 76
Query: 287 PVMGPSLASPSRAASQLAV-PSTP------LSPHSAASGTAAGSQPSSPRYRPYTVTHPW 339
P+ P S S A L P P + P + + A +SP P P
Sbjct: 77 PLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALAL----ASPMIAPTLKGTPS 132
Query: 340 ASSGVSILSSSPS--------PPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRP 391
+S+ +++++ +P PP L +SP +V + S + + P P + ++ P
Sbjct: 133 SSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVP 192
Query: 392 SSLRISP 398
S + +P
Sbjct: 193 SEVVPNP 199
Score = 38.9 bits (89), Expect = 0.032
Identities = 40/142 (28%), Positives = 53/142 (37%), Gaps = 26/142 (18%)
Query: 266 SSLSSLYESSPAPT--PSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGS 323
SS ++PAP P+ S P A+P A PS +P T +
Sbjct: 915 SSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP------TPPAA 968
Query: 324 QPSSPRYRPYT-----------VTHPWASSGVSILS--SSPSPPALA-----SSPQAVPA 365
P SP+ P T T P G + S +P+PPA+ SP A P
Sbjct: 969 TPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPF 1028
Query: 366 SSSRQRPSSTGPPLPPASPSAT 387
P + PP P SP+AT
Sbjct: 1029 PKGASTPPAATPPSPKGSPAAT 1050
Score = 38.1 bits (87), Expect = 0.055
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 10/137 (7%)
Query: 272 YESSPAP---TPSFWSSVPVMGPSLASPSRAASQLAVPS-TPLSPHSAASGTAAGSQPSS 327
++ +P P TP P P +P+ A+ P +P +P + T P S
Sbjct: 1283 HKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPS 1342
Query: 328 PRYRP-YTVTHPWASSGVSILSSS--PSPPALASSPQAVPA---SSSRQRPSSTGPPLPP 381
P+ P T P + G + SS P+PPA S + PA S ++ P+ P P
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Query: 382 ASPSATSRRPSSLRISP 398
SP+ P +P
Sbjct: 1403 TSPAVIPLSPKKAPATP 1419
Score = 37.4 bits (85), Expect = 0.094
Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 247 TGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVP 306
T + TSP C S S L +PAP +PV S + ++ P
Sbjct: 1706 TKKSSATSPPICPDPSAKNGSKGPLSTVAPAPL------LPVQKDS-SKTAKGKDASHSP 1758
Query: 307 STPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPP-ALASSPQAVPA 365
PL+P + + T P + + P ++S +S++PSPP +L +P VP
Sbjct: 1759 KGPLAPPESKAST-----PLTAAAFEKVLPKPESAS----VSAAPSPPVSLPLAPSPVPT 1809
Query: 366 SSSRQR--PSSTGPPL-PPASPSATSRRPSSLRISPSLGASGG 405
+Q+ PSS G L P+ P A + L + P SGG
Sbjct: 1810 LPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGG 1852
Score = 37.0 bits (84), Expect = 0.12
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 26/135 (19%)
Query: 277 APTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGT----AAGSQPS----SP 328
APTP + G A+P + +TP SP + + T A + P+ SP
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067
Query: 329 RYRPYTVTHPWASSGVSILSSSPSPPALA-SSPQAVPASSSRQRPSSTGPPLPPASPSAT 387
+ P T + L +P+PPA SP+ PA+ PS G P+PPA+ +
Sbjct: 1068 KGGPATPS----------LKGAPTPPAATPPSPKGGPAT-----PSPKGAPMPPAATPPS 1112
Query: 388 SRRPSSLRISPSLGA 402
+ L P GA
Sbjct: 1113 PK--GGLATPPHKGA 1125
Score = 37.0 bits (84), Expect = 0.12
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 25/138 (18%)
Query: 274 SSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPY 333
++PA TP P LA+PS + +TP SP + + P++P P
Sbjct: 1173 TTPAATP------PSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP- 1225
Query: 334 TVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPL---PPASPSATSRR 390
P G++ +PSP ++P A P PS G P P +P+ +
Sbjct: 1226 ----PSPKGGLA----TPSPKGAPTTPAATP-------PSPKGGPATPPPKGAPTPPAAT 1270
Query: 391 PSSLRISPSLGASGGASN 408
P SL+ + GA N
Sbjct: 1271 PPSLKGGLATPPHKGAPN 1288
Score = 37.0 bits (84), Expect = 0.12
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 227 ATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSV 286
ATS P A +P + +PGT P GA + ++ SP TP+ ++
Sbjct: 1302 ATSPP--KGAPTPPAATPPSPKGSPGTPP------PKGAPTPPAVTPPSPKGTPTLPATT 1353
Query: 287 PVM--GPSLAS-------PSRAASQLAVPS-TPLSPHSAASGTAAGSQPSSPRYRPYTVT 336
P GP+ S P+ S P+ TP SP + + P+SP P +
Sbjct: 1354 PSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPK 1413
Query: 337 HPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSA 386
A+ +++PS L +P AV S ++ P+++ P PA+PS+
Sbjct: 1414 KAPATPVTREGAATPSKGDL--TPPAVTPVSLKKAPATSAPKGGPATPSS 1461
Score = 35.0 bits (79), Expect = 0.47
Identities = 51/186 (27%), Positives = 72/186 (38%), Gaps = 19/186 (10%)
Query: 220 NPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPT 279
+P S AT P A +P + +P +P+ + A++L S + PA T
Sbjct: 1018 SPKGSPAAT--PFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP-KGGPA-T 1073
Query: 280 PSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPW 339
PS P P A+P S P+TP SP A AA P SP+ T H
Sbjct: 1074 PSL-KGAPT--PPAATPP---SPKGGPATP-SPKGAPMPPAA--TPPSPKGGLATPPHKG 1124
Query: 340 ASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTG------PPLPPASPSATSRRPSS 393
A + + SP P+ P + + PS G P P +P+AT P
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184
Query: 394 LRISPS 399
+PS
Sbjct: 1185 GLATPS 1190
Score = 34.7 bits (78), Expect = 0.61
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 4/137 (2%)
Query: 274 SSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLS-PHSAASGTAAGSQPSSPRYRP 332
++PA TP P +P+ A+ P L+ P + T + P SP+
Sbjct: 1127 TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1186
Query: 333 YTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTG---PPLPPASPSATSR 389
T + A + + SP SP+ P + + PS G P P +P+ +
Sbjct: 1187 ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1246
Query: 390 RPSSLRISPSLGASGGA 406
P S + P+ GA
Sbjct: 1247 TPPSPKGGPATPPPKGA 1263
Score = 34.7 bits (78), Expect = 0.61
Identities = 41/187 (21%), Positives = 62/187 (33%), Gaps = 7/187 (3%)
Query: 213 STQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLY 272
+T + A+ + P AA P L T S G + L++
Sbjct: 1177 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPS 1236
Query: 273 ESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLS------PHSAASGTAAGSQPS 326
TP+ P GP+ P A + A L PH A A + PS
Sbjct: 1237 PKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPS 1296
Query: 327 SPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSA 386
P+ P T A + + SP P+ P + PS G P PA+ +
Sbjct: 1297 -PKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS 1355
Query: 387 TSRRPSS 393
+ P++
Sbjct: 1356 SKGGPTT 1362
Score = 33.9 bits (76), Expect = 1.0
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 28/261 (10%)
Query: 251 PGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPL 310
P P + G +S +S+ ++ P S+ P++ SL +P+ AA L
Sbjct: 600 PIGKPASSMTSPLGVNSSASVIKTDSYAGPD--SAGPLLKSSLITPTVAAFPLESADPAG 657
Query: 311 SPHSAASGTAAGSQPSSPRYRPYTVT-----HPWASSGVSILSSSPSPP---ALASSPQ- 361
+ A GT+ + +SP + TV+ HP ++ L P+ +A SPQ
Sbjct: 658 VAPTTAKGTSTYTTTASP-FLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQN 716
Query: 362 -AVPASSSRQRP----SSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHF 416
P ++ P S P LPPA +++ + + +L + D
Sbjct: 717 TCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSG 776
Query: 417 TIETCKETDMLNYLIECFDRVGI----EEKKAP--KMCSQP-----AVSQLLSNIRSQCI 465
T L YL + +G+ + K+ P K + P +S +S + + +
Sbjct: 777 ASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFL 836
Query: 466 SHTALVLQGSLTQPRSLQQPS 486
+L QGS P + P+
Sbjct: 837 PENSLSFQGSKDSPATTHSPT 857
>gi|24430146 nucleoporin 153kDa [Homo sapiens]
Length = 1475
Score = 51.2 bits (121), Expect = 6e-06
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 16/195 (8%)
Query: 222 FASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGAS-SLSSLYESSPAPTP 280
F S T++S P P + SNP +S F + A S SL +S A T
Sbjct: 1212 FGSSTSSSNP-------PVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTS 1264
Query: 281 SFWSSVP--VMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
S ++V V GP +S + S +T S SA S G+ PS+P P +
Sbjct: 1265 STGTAVTPFVFGPGASSNNTTTSGFGFGATTTSS-SAGSSFVFGTGPSAPSASPAFGANQ 1323
Query: 339 WASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISP 398
+ G S +S P+PP S +SS+ P+ + P P ++S +P P
Sbjct: 1324 TPTFGQSQGASQPNPPGFGSI-----SSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQP 1378
Query: 399 SLGASGGASNWDSYS 413
S A G + +S S
Sbjct: 1379 SQSAFGSGTTPNSSS 1393
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 51.2 bits (121), Expect = 6e-06
Identities = 49/137 (35%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 274 SSPAPTPSFWSSVPVMGPSLASPSRAASQLAVP-STPLSPHSAASGTAAGSQPSSPRYRP 332
S PA P S+ P PS A PS AA L VP S P SP + S T P P
Sbjct: 678 SPPASPPVSPSATP---PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 734
Query: 333 YTVT-HPWASSGVSILSSSPS--PPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSR 389
V P AS +S ++ P PP LA+ P VP S P S PP +P A +
Sbjct: 735 LQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALAT 794
Query: 390 RPSSLRISPSLGASGGA 406
P SP G A
Sbjct: 795 PPLQALPSPPASFPGQA 811
Score = 47.8 bits (112), Expect = 7e-05
Identities = 56/202 (27%), Positives = 83/202 (41%), Gaps = 33/202 (16%)
Query: 223 ASLTATSQPIAAAARSPDR--------NLLLNTGSNPGTSPMFCSVASFGASSLSSLYES 274
AS +T++P AA R P + L++ + P +SP ++ G + + S
Sbjct: 212 ASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA-HPS 270
Query: 275 SPAP-----------TPSFWSSVPVMGPSLASPSRAASQLAVPSTPL-SPHSAASGTAAG 322
P P TP + P +GP +SP S + P+ P +AA+ A
Sbjct: 271 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPAT 330
Query: 323 SQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPL--P 380
PS P P + P S+ S L + PSPP A+ P P PS T PP+ P
Sbjct: 331 LPPSPPLATPLPLAPPSPSAPPS-LQTLPSPP--ATPPSQAP-------PSMTTPPMQAP 380
Query: 381 PASPSATSRRPSSLRISPSLGA 402
P+ + + SPSL A
Sbjct: 381 PSLQTIPPIQVPHSLTSPSLQA 402
Score = 47.8 bits (112), Expect = 7e-05
Identities = 59/216 (27%), Positives = 82/216 (37%), Gaps = 38/216 (17%)
Query: 221 PFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFC--SVASFGASSLSSLYESSPAP 278
P +L + + P A +P L T P P+ S + S + P
Sbjct: 534 PLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQ 593
Query: 279 TPSFWSSVPVMG-------PSLASPSRAASQLAVP----------STPLSPHSAASGTAA 321
P +S P+ G P P +A LA+P S PLSP + S A
Sbjct: 594 APPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAP 653
Query: 322 GS------------QPSSPRYRPYTVTHPWASSGVSILSSSPS--PPALASSPQAVPASS 367
+ PS P P++ P AS VS ++ PS PP+LA+ P VP S
Sbjct: 654 NALAVHLLQAPFSPPPSPPVQAPFS---PPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 710
Query: 368 SRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGAS 403
P S PP +P + P L++ PS AS
Sbjct: 711 PASPPMSPSATPPPQAPPPLAAPP--LQVPPSPPAS 744
Score = 46.6 bits (109), Expect = 2e-04
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 250 NPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTP 309
+P SP A+ + + SL + P P + P M PS P +A LA P
Sbjct: 678 SPPASPPVSPSATPPSQAPPSL-AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 736
Query: 310 LSPHSAASGTAAGSQPSSPRYRPYTVTHPW-------ASSGVSILSSSP--SPPALASSP 360
+ P AS + S PR P P AS +S L+ P +PPALA+ P
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPP 796
Query: 361 -QAVPASSSRQRPSSTGPPLPPASPSAT 387
QA+P+ P ++ P P SPSA+
Sbjct: 797 LQALPS------PPASFPGQAPFSPSAS 818
Score = 46.2 bits (108), Expect = 2e-04
Identities = 58/195 (29%), Positives = 77/195 (39%), Gaps = 23/195 (11%)
Query: 223 ASLTATSQPIAAAARSPDRNLLLN--------TGSNPGTSPMFCSVASFGASSLSSLYES 274
ASLT+ S+P + SP L+ T +P SP+ + +LSSL
Sbjct: 439 ASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASH 498
Query: 275 SP-APTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPY 333
SP AP S SLA PS ++ + PL + + S+P P+
Sbjct: 499 SPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLE-NLPSLAPPPLQTASAPLTTPH 557
Query: 334 TVTHPWASSGVSILSSSP---SPPALASS-----PQAVPASSSRQRPSSTGPPLPPASPS 385
T P + SP PP SS PQA PA +S P G P PP SP
Sbjct: 558 LETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALAS---PPLQGLPSPPLSPL 614
Query: 386 AT--SRRPSSLRISP 398
AT + P L + P
Sbjct: 615 ATPPPQAPPXLALPP 629
Score = 43.9 bits (102), Expect = 0.001
Identities = 57/193 (29%), Positives = 74/193 (38%), Gaps = 20/193 (10%)
Query: 219 ENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAP 278
E P + T Q A A P + L +P SP+ ++ P+P
Sbjct: 582 ETPSSIATPPPQAPPALASPPLQGL-----PSPPLSPLATPPPQAPPXLALPPLQAPPSP 636
Query: 279 TPSFWSSVPVMGPSLASPS-RAASQLAVP--STPLSPHSAASGTAAGSQPSSPRYRPYTV 335
S P + P LA+PS +A + LAV P SP + A S P+SP P
Sbjct: 637 PAS-----PPLSP-LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 690
Query: 336 THPWASSGVSI--LSSSPSPPAL-ASSPQAVP---ASSSRQRPSSTGPPLPPASPSATSR 389
A ++ L PSPPA SP A P A P PP PPASP +
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPS 750
Query: 390 RPSSLRISPSLGA 402
R+ P L A
Sbjct: 751 ATPPPRVPPLLAA 763
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/199 (26%), Positives = 69/199 (34%), Gaps = 31/199 (15%)
Query: 220 NPFASLTATSQPIAAAAR-----SPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYES 274
+P A+ + P+ AA SP + L P T SV+ L+
Sbjct: 822 SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG---PRLTLALAP 878
Query: 275 SPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYT 334
P P PS S + GP LA S +A+ STP SG G+ S P
Sbjct: 879 GPPPPPSRSPSSTLSGPDLAGHSSSAT-----STPEELRGYDSGPEGGAAASPPPDAELA 933
Query: 335 VTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPP--------LPPASPSA 386
HP A S P+PP P P +TGP P +
Sbjct: 934 ACHPAA------WSRGPAPPLAFRGAPGAPL----PWPPATGPGSADGLCTIYETEGPES 983
Query: 387 TSRRPSSLRISPSLGASGG 405
+ P +L PS G SGG
Sbjct: 984 ATPAPGALDPGPSPGTSGG 1002
Score = 41.6 bits (96), Expect = 0.005
Identities = 64/223 (28%), Positives = 85/223 (38%), Gaps = 68/223 (30%)
Query: 235 AARSPDRNLLL------NTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPV 288
A +P R+ L +G PGT + S A + L P P PS P
Sbjct: 147 ATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL----PRPAPSARPRPPT 202
Query: 289 MGP----------SLASPSRAASQ---------------LAVPSTPLSPHSAASGTAAG- 322
GP S PS AA + L+ +TPLS + + +A G
Sbjct: 203 EGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGT 262
Query: 323 ----SQPSSPR------YRPYTVTHPW--ASSGVSILSSSP--------------SPPAL 356
+ PS P+ RP VT P A+ + LSSSP PP
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDN 322
Query: 357 ASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
A++P +PA+ P +T PL P SPSA P SL+ PS
Sbjct: 323 AATP--LPATLPPSPPLATPLPLAPPSPSA----PPSLQTLPS 359
Score = 37.7 bits (86), Expect = 0.072
Identities = 50/145 (34%), Positives = 61/145 (42%), Gaps = 29/145 (20%)
Query: 273 ESSPAPTPSFWSSVPV-------MGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQP 325
++ P+P SF P M P P +A LA P + P AS T
Sbjct: 798 QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL----- 852
Query: 326 SSPRYRPYTVTHPWASSGVSI-LSSSPSPPALASSPQAVPASSSRQRPSST--GPPLPPA 382
+PR RP T + SG + L+ +P PP P S S PSST GP L
Sbjct: 853 QAPR-RPPTPGPDTSVSGPRLTLALAPGPPP--------PPSRS---PSSTLSGPDLAGH 900
Query: 383 SPSATSRRPSSLRISPSLGASGGAS 407
S SATS P LR S G GGA+
Sbjct: 901 SSSATS-TPEELRGYDS-GPEGGAA 923
Score = 36.2 bits (82), Expect = 0.21
Identities = 69/218 (31%), Positives = 83/218 (38%), Gaps = 53/218 (24%)
Query: 233 AAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSL-SSLYESSPAPTPSFWSSVPVMGP 291
AA A P + L T S GT A+ L ++L S P TP +P+ P
Sbjct: 292 AAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATP-----LPLAPP 346
Query: 292 SLASPSRAASQLAVPSTPLSPHSAA--SGTAAGSQ--PSSPRYRPYTVTHPWASSGVSIL 347
S PS S +PS P +P S A S T Q PS P V H S L
Sbjct: 347 S---PSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPS---L 400
Query: 348 SSSPSPPALAS---------------------SPQAVPAS-SSRQRPSST---GPPL--- 379
+ PSP AL+S SP+ AS +S RP+ST PPL
Sbjct: 401 QAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAP 460
Query: 380 --PPASP-------SATSRRPSSLRISPSLGASGGASN 408
PASP A S S L I P S AS+
Sbjct: 461 LSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASH 498
Score = 34.3 bits (77), Expect = 0.80
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 34/189 (17%)
Query: 244 LLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQL 303
+L G P+ G +++ ES+P P+ + P+ P+ +
Sbjct: 46 VLGAAGAVGRKPLAERAGGIGGATIP---ESAPRAGPTRSAGTSSRNPASRPPASGRGER 102
Query: 304 AVPSTPLSPHSAAS-GTAAGSQPSSPRYRP-------YTVTHPWA---------SSGVSI 346
A P+ SP +S G A+G+ P + TV A S+G
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162
Query: 347 LSSSPSP----PALASSPQAV--------PASSSRQRPSSTGP--PLPPASPSATSRRPS 392
+S P+P PA+A +A PA S+R RP + GP + AS +T+
Sbjct: 163 DTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSP 222
Query: 393 SLRISPSLG 401
+ R PS G
Sbjct: 223 AARRRPSAG 231
Score = 32.7 bits (73), Expect = 2.3
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 14 LARLAGGQTSQPTTPLTSPQRENPP--GPPIAASAPGPSQSLGLNVHNMTPATSPIGASG 71
L R A S TPL+SP R P G P A + P + GL T P
Sbjct: 234 LQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP----- 288
Query: 72 VAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQ 104
R ++ + LSSSP L T S S ++++
Sbjct: 289 ---RKDAAPALGPLSSSP---LATPSPSGTKAR 315
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 51.2 bits (121), Expect = 6e-06
Identities = 55/192 (28%), Positives = 75/192 (39%), Gaps = 33/192 (17%)
Query: 232 IAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGP 291
+AAA R+ R L+ G +P S+ ASS L SSP+ +P+F S MGP
Sbjct: 1442 LAAAGRAA-REKPLSASDGEGGTPQPSRAYSYFASSSPPLSPSSPSESPTF--SPGKMGP 1498
Query: 292 SLA--------SPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRY--------RPYTV 335
SP+ A+ P P A GT +PS+PR P+ V
Sbjct: 1499 RATAEFSTQTPSPAPASDMPRSPGAPTPSPMVAQGTQTPHRPSTPRLVWQESSQEAPFMV 1558
Query: 336 -------------THPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPA 382
H AS+ + S + + P Q P S S+ P GPP P
Sbjct: 1559 ITLASDASSQTRMVHASASTS-PLCSPTETQPTTHGYSQTTPPSVSQLPPEPPGPPGFPR 1617
Query: 383 SPSATSRRPSSL 394
PSA + P +L
Sbjct: 1618 VPSAGADGPLAL 1629
Score = 37.4 bits (85), Expect = 0.094
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 295 SPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRP-YTVTHPWASSGVSILS--SSP 351
+P + +QLA P + +P S+ S S R P VT +A L SSP
Sbjct: 1309 TPGTSPTQLAAPVSFSTPTSSDS--------SGGRVIPDVRVTQHFAKETQDPLKLHSSP 1360
Query: 352 SPPALASSPQAVPASSSRQRPSSTG-PPLP---------PASPSATSRRPSSLRISPSLG 401
+ P+ AS +P S P++T P P PASP+ + R PS + S G
Sbjct: 1361 ASPSSASKEIGMPFSQGPGTPATTAVAPCPAGLPRGYMTPASPAGSERSPSPSSTAHSYG 1420
Query: 402 ASGGASNWDSYSD 414
S +N+ S ++
Sbjct: 1421 HSPTTANYGSQTE 1433
Score = 35.0 bits (79), Expect = 0.47
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 17/141 (12%)
Query: 248 GSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMG------PSLAS------ 295
GS SP + S+G S ++ Y S P S + G P AS
Sbjct: 1405 GSERSPSPS-STAHSYGHSPTTANYGSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGT 1463
Query: 296 --PSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSP 353
PSRA S A S PLSP S + PR T + + S + SP
Sbjct: 1464 PQPSRAYSYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGA 1523
Query: 354 PALASSPQAVPASSSRQRPSS 374
P SP + + RPS+
Sbjct: 1524 P--TPSPMVAQGTQTPHRPST 1542
Score = 34.7 bits (78), Expect = 0.61
Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 19/134 (14%)
Query: 270 SLYESSPAPTPSFWSSVPVMGPSLASPSRAASQ-----LAVPSTPLSPHSAASGTAAGSQ 324
SL E +P P P+ PV P AS + Q L PS PL ++ T A
Sbjct: 524 SLGEPTPLPPPTS-QQPPVGAPHRASGTSPLKQKGPQGLGQPSGPLPAKASPLSTKASPL 582
Query: 325 PS--SPRYRPYTVTHPWASSGVSILSSS----------PSPPALASSPQAVPASSSRQRP 372
PS SP+ +P + P + + S+ P PP + A P S R
Sbjct: 583 PSKASPQAKPLRASEP-SKTPSSVQEKKTRVPTKAEPMPKPPPETTPTPATPKVKSGVRR 641
Query: 373 SSTGPPLPPASPSA 386
+ P+ A P A
Sbjct: 642 AEPATPVVKAVPEA 655
Score = 34.7 bits (78), Expect = 0.61
Identities = 71/296 (23%), Positives = 113/296 (38%), Gaps = 50/296 (16%)
Query: 45 SAPGPSQSLGLNVHNMT-PATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRS 103
S G + H+ T PA++P SG + S SS S SSPS + R
Sbjct: 966 SLTGSPEDRSRGEHSSTLPASTPSYTSGTSPTSLSSLEEDS-DSSPSRRQRLEEAKQQRK 1024
Query: 104 QSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVC 163
+ S + IE+ +E R E+ L ++E EV +++
Sbjct: 1025 A----------RHRSHGPLLPTIEDSSEEEELREEEELLREQEKMR--EVEQQRIRSTAR 1072
Query: 164 KIFRV-----SWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRD 218
K R + + R+R S+LS P E S ++L ME L S+ + +
Sbjct: 1073 KTRRDKEELRAQRRRERSKTPPSNLS------PIEDASPTEELRQAAEMEELHRSSCS-E 1125
Query: 219 ENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAP 278
+P SL + ++ + + G S ++ S + + + SLY SP
Sbjct: 1126 YSPSPSLDSEAEAL-----------------DGGPSRLYKSGSEYNLPTFMSLY--SPTE 1166
Query: 279 TPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAG-----SQPSSPR 329
TPS S+ P G L S A ++ + L + A G SQP+ PR
Sbjct: 1167 TPSGSSTTPSSGRPLKSAEEAYEEMMRKAELLQRQQGQAAGARGPHGGPSQPTGPR 1222
Score = 30.8 bits (68), Expect = 8.8
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 16 RLAGGQTSQPTTPLTSPQRENPP-GPPIAASAPGP-----SQSLGLNVHNMTPATSPIGA 69
RL G +P TPL P + PP G P AS P Q LG + SP+
Sbjct: 519 RLLEGSLGEP-TPLPPPTSQQPPVGAPHRASGTSPLKQKGPQGLGQPSGPLPAKASPLST 577
Query: 70 SGVAHRSQSSEGVSSL-----SSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDS 124
S++S L S +PS+ E +++ ++++ M + + V S
Sbjct: 578 KASPLPSKASPQAKPLRASEPSKTPSSVQEKKTRVPTKAEPMPKPPPETTPTPATPKVKS 637
Query: 125 GIENME 130
G+ E
Sbjct: 638 GVRRAE 643
Score = 30.8 bits (68), Expect = 8.8
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 21 QTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQ 77
Q SQPTT ++P P G P PGPS + G A G+ G A Q
Sbjct: 3801 QQSQPTTRGSAPAASQPAGKP----QPGPSTATGPQPAGPPRAEQTNGSKGTAKAPQ 3853
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 50.8 bits (120), Expect = 8e-06
Identities = 89/401 (22%), Positives = 153/401 (38%), Gaps = 37/401 (9%)
Query: 21 QTSQPTTPLTSPQRENPPG-PPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSS 79
+T +P +P R +P G PP A+ + PS +L + T + + + + S+
Sbjct: 213 RTLSRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLT-KMDST 271
Query: 80 EGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDEND---- 135
++ S PS + T + S + S SM S + + + + + + D
Sbjct: 272 ASITRTPSRPSTASPTGTPSRA-SLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTAS 330
Query: 136 --RREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVS--WKDRDRDVIFLSSLSAQFKQNP 191
R R+ + PS + R S + LSS ++ P
Sbjct: 331 ISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPP 390
Query: 192 KEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNP 251
+ + T + +T+ P R+P R TG+ P
Sbjct: 391 RASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASP----TRTPPR--ASPTGTPP 444
Query: 252 GTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTP-- 309
SP + AS + +SP +PS ++ P PS ASP+ + S+ ++ TP
Sbjct: 445 RASP---TGTPSRASPTGTQSTASPTGSPS--TASPTGSPSTASPTGSPSRASLTRTPSR 499
Query: 310 ---LSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPAS 366
S AS T S+ +SP + P T + P S ++ SPS AL +P +
Sbjct: 500 ASLTKMESTASITRTPSR-ASPTWTPSTAS-PTGSPSTALAMGSPSRAALTRTPSRASLT 557
Query: 367 SSRQRPSSTGPPLPPASPSATSRRPSSL---RISPSLGASG 404
+ R S T P S ++ +R PS++ R+ PS +G
Sbjct: 558 RTPSRASLTTP-----SRASLTRTPSTVLLTRMPPSASPTG 593
Score = 37.0 bits (84), Expect = 0.12
Identities = 81/373 (21%), Positives = 124/373 (33%), Gaps = 53/373 (14%)
Query: 22 TSQPTT--PLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSS 79
T +P+T P +P R +P G P AS G S + P SP G A ++
Sbjct: 350 TGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPT--GTPPRASPTGTPSTASLTRKP 407
Query: 80 EGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREK 139
S S+ + S +++ + + + ++
Sbjct: 408 PRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPT 467
Query: 140 RSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFK 199
S S P+ P + + R R + +A + P +
Sbjct: 468 GSPSTASPTGSPSTASPTGSPSRASLTRTP----SRASLTKMESTASITRTPSRASPTWT 523
Query: 200 DLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCS 259
ST + +P +L S AA R+P R L T S
Sbjct: 524 P------------STASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSR--------- 562
Query: 260 VASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGT 319
+SL++ +S TPS + + P ASP+ S+ + P S +
Sbjct: 563 ------ASLTTPSRASLTRTPS--TVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDS 614
Query: 320 AAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPL 379
A + PR P T T P A S + +PP +SP P R S TG P
Sbjct: 615 TASITRTPPRASP-TETPPRA-------SPTGTPP--RASPTGTP-----PRASPTGTP- 658
Query: 380 PPASPSATSRRPS 392
P ASP+ T R S
Sbjct: 659 PRASPTGTPSRAS 671
Score = 35.0 bits (79), Expect = 0.47
Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 30/146 (20%)
Query: 287 PVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWAS----- 341
P PS ASP+R S ++ TP S S + S +P T T P AS
Sbjct: 4 PTRTPSRASPTRTPSTASLTGTP-SRASLTGTPSTASLMGTPSRASLTGTPPRASLKGTT 62
Query: 342 -----------------SGVSILSSSPS------PPALASSPQAVPASSSRQRPSSTGPP 378
S+L+ +PS P AS + +P +S +RPS+
Sbjct: 63 SMASLMVSPSRASLTRMQSSSLLTRTPSMASLKRMPPRASRTRTLPRASLMRRPSTASLT 122
Query: 379 LPPASPS-ATSRRPSSLRISPSLGAS 403
P+ S T+ +SL ++PS A+
Sbjct: 123 RSPSRASLTTTPSRASLSMTPSTAAA 148
Score = 32.3 bits (72), Expect = 3.0
Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 21/180 (11%)
Query: 223 ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLS---SLYESSPAPT 279
+SL + +A+ R P R S T P + +SL+ S + P+
Sbjct: 82 SSLLTRTPSMASLKRMPPR------ASRTRTLPRASLMRRPSTASLTRSPSRASLTTTPS 135
Query: 280 PSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPW 339
+ S P +L PSRA+ + TP + + A + PR P +
Sbjct: 136 RASLSMTPSTAAALTMPSRAS----LTRTPPRASLTMTPSTASLTRTPPRASPTGMPSRT 191
Query: 340 ASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS 399
+ +G+ PS +L + + R S TG P P ASP+ + R +SL + PS
Sbjct: 192 SPTGM------PSTASLTKMDSTASITRTLSRASPTGTP-PRASPTGSPPR-ASLSMMPS 243
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 50.4 bits (119), Expect = 1e-05
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 21/225 (9%)
Query: 214 TQTRDENPFASLTATSQPIAAAARSPDRNLL--LNTGSNPGTSPMFCSVASFGASSL--S 269
T T + P + T T P+A + L T S P S F S A+S +
Sbjct: 1933 TSTTNITPKHTSTGTRTPVAHTTSASSSRLPTPFTTHSPPTGSSPFSSTGPMTATSFQTT 1992
Query: 270 SLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPS---TPLSPHSAASGT------- 319
+ Y + P + + VP SL +PS + + T S HS +GT
Sbjct: 1993 TTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVIITTHTQMATSASIHSTPTGTVPPPTTL 2052
Query: 320 -AAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPP 378
A GS ++P P TVT S S S++ + + SS +P +SS + PSS
Sbjct: 2053 KATGSTHTAP---PMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNSSSRPPSSPITT 2109
Query: 379 LPPASPSATSRRPSSLRISPSLGASGGA-SNWDSY--SDHFTIET 420
P SAT+ ++ ++S S S A S SY S H + +T
Sbjct: 2110 QLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQT 2154
Score = 44.3 bits (103), Expect = 8e-04
Identities = 56/210 (26%), Positives = 83/210 (39%), Gaps = 30/210 (14%)
Query: 213 STQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNP-----------GTSPMFCSVA 261
ST + P ++ T T P + R+P + T S P G+SP F S
Sbjct: 1531 STHHPEVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFTTHSPPTGSSP-FSSTG 1589
Query: 262 SFGASSL--SSLYESSPAPTPSFWSSVPVMGPSLASPSR---AASQLAVPSTPLSPHSAA 316
A+S ++ Y + P + + VP SL +PS A +T S HS
Sbjct: 1590 PMTATSFKTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASIHSMP 1649
Query: 317 SGT--------AAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSS 368
+GT A GS ++P T A S ++ +S S + SS A+S+
Sbjct: 1650 TGTIPPPTTLKATGSTHTAPTMTLTTSGTSQALSSLNTAKTSTSLHSHTSSTHHAEATST 1709
Query: 369 -----RQRPSSTGPPLPPASPSATSRRPSS 393
P+STG P + S TS+ SS
Sbjct: 1710 STTNITPNPTSTGTPPMTVTTSGTSQSRSS 1739
Score = 42.4 bits (98), Expect = 0.003
Identities = 54/237 (22%), Positives = 91/237 (38%), Gaps = 37/237 (15%)
Query: 211 MMSTQTRDENPFASLTATSQPIAAAARSPDRN-----LLLNTGSNPGTSPMFCSVASFGA 265
+ ST T+ A+ AT+ + A S ++ + L T + GTSP +
Sbjct: 1292 LRSTATKPTVTQATTRATASTASPATTSTAQSTTRTTMTLPTPATSGTSPTLPKSTNQEL 1351
Query: 266 SSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPST----------PLSPHSA 315
++ + P PTP+ GP+ P + A +T P +PH+
Sbjct: 1352 PGTTATQTTGPRPTPA-----STTGPTTPQPGQPTRPTATETTQTRTTTEYTTPQTPHTT 1406
Query: 316 ASGTAAGSQ-----PSSPRYRPYTVTHPWASSGVSILSS----------SPSPPALASSP 360
S AGS P + T T+P S + L + +PS + +
Sbjct: 1407 HSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPT 1466
Query: 361 QAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHFT 417
A A+S+ + TG PP + AT ++ I+P+ SG + S+S + T
Sbjct: 1467 HAQMATSASNHSAPTGTIPPPTTLKATGSTHTAPPITPT--TSGTSQAHSSFSTNKT 1521
Score = 38.1 bits (87), Expect = 0.055
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 239 PDRNLLLNTGSNP-------GTSPMFCSVASFGASSLSSLYESSPAPTP----SFWSSVP 287
P L TGS P GTS ++S G S S+ +SP TP + SS P
Sbjct: 1205 PTTPQLPTTGSRPTQVWPMTGTSTTIGLLSSTGPSPSSNHTPASPTQTPLLPATLTSSKP 1264
Query: 288 VMG------PSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWAS 341
P+ A +A S L +T S + + T A ++ ++ P T + A
Sbjct: 1265 TASSGEPPRPTTAVTPQATSGLPPTATLRSTATKPTVTQATTRATASTASPATTS--TAQ 1322
Query: 342 SGVSILSSSPSPPALASSPQAVPASSSRQRP-----SSTGP-PLPPASPSATSRRP 391
S + P+P +SP +P S++++ P +TGP P P ++ T+ +P
Sbjct: 1323 STTRTTMTLPTPATSGTSP-TLPKSTNQELPGTTATQTTGPRPTPASTTGPTTPQP 1377
Score = 37.0 bits (84), Expect = 0.12
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 30/165 (18%)
Query: 260 VASFGASSLSSLYESSPAPTPSFWSS-----VPVMGPSLASPSR---AASQLAVPSTPLS 311
V S G + +S + ++ PTPS + VP SL +PS A +T S
Sbjct: 1416 VPSTGPVTATSFHATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSAS 1475
Query: 312 PHSAASGT--------AAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAV 363
HSA +GT A GS ++P P T T S S S++ +P +L S
Sbjct: 1476 NHSAPTGTIPPPTTLKATGSTHTAP---PITPTTSGTSQAHSSFSTNKTPTSLHSHTS-- 1530
Query: 364 PASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASN 408
S+ P + P S + + P+S R + + A++
Sbjct: 1531 ---------STHHPEVTPTSTTTITPNPTSTRTRTPVAHTNSATS 1566
Score = 35.4 bits (80), Expect = 0.36
Identities = 50/204 (24%), Positives = 72/204 (35%), Gaps = 37/204 (18%)
Query: 208 EVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASS 267
EV ST T NP ++ T T +A S T S P S F S A+S
Sbjct: 1536 EVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFTTHSPPTGSSPFSSTGPMTATS 1595
Query: 268 L--SSLYESSPAPTPSFWSSVPVMGPSLASPSR---AASQLAVPSTPLSPHSAASGT--- 319
++ Y + P + + VP SL +PS A +T S HS +GT
Sbjct: 1596 FKTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASIHSMPTGTIPP 1655
Query: 320 -----AAGSQPSSPRYRPYTV------------------------THPWASSGVSILSSS 350
A GS ++P T TH ++ S + +
Sbjct: 1656 PTTLKATGSTHTAPTMTLTTSGTSQALSSLNTAKTSTSLHSHTSSTHHAEATSTSTTNIT 1715
Query: 351 PSPPALASSPQAVPASSSRQRPSS 374
P+P + + P V S + Q SS
Sbjct: 1716 PNPTSTGTPPMTVTTSGTSQSRSS 1739
Score = 33.5 bits (75), Expect = 1.4
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 17 LAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRS 76
L G T PT+P+T+ +P GP ++ + + SL H TPA++P+ + G +
Sbjct: 2288 LTSGVTGIPTSPVTNLTTRHP-GPTLSPTTRFLTSSL--TAHGSTPASAPVSSLGTP--T 2342
Query: 77 QSSEGVSSL 85
+S GV S+
Sbjct: 2343 PTSPGVCSV 2351
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 50.4 bits (119), Expect = 1e-05
Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 60/376 (15%)
Query: 30 TSPQRENPPGPPIAASAPGP-----SQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSS 84
+ P+ E GPP + GP + + G+++ N + A G + S +
Sbjct: 1568 SGPRNERRSGPPSKSGKRGPFDDQPAGTTGVDLINGSSAHHQEGVPNGTGQKNSKDSTGK 1627
Query: 85 LSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDEND--------R 136
P + + + D++ + + + IE+ + + ND +
Sbjct: 1628 KREDPKPGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVIEDPQSNLNDDGFTEVVSK 1687
Query: 137 REKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFS 196
++++ L D+E EEQ +Q+ W ++ + S S + K+ +
Sbjct: 1688 KQQKRLQDEERRK----KEEQVIQV--------WNKKNANEKGRSQTSKLPPRFAKKQAT 1735
Query: 197 DFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPM 256
+ A +A+ P+A+A P + + ++ +P+
Sbjct: 1736 GIQQ----------------------AQSSASVPPLASAPLPPSTSASVPASTS---APL 1770
Query: 257 FCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAA 316
++ AS+ + + S+ AP + +S PV LA S +AS A S P S SAA
Sbjct: 1771 PATLTPVPASTSAPVPASTLAPVLAS-TSAPVPASPLAPVSASASVSA--SVPAST-SAA 1826
Query: 317 SGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSP---PALASS--PQAVPASSSRQR 371
+ T++ + S+P P + +S V+IL+S+ P ALAS+ P PA+SS
Sbjct: 1827 AITSSSAPASAPAPTPILASVSTPAS-VTILASASIPILASALASTSAPTPAPAASSPAA 1885
Query: 372 PSSTGPPLPPASPSAT 387
P T P +P ++P+A+
Sbjct: 1886 PVITAPTIPASAPTAS 1901
Score = 39.3 bits (90), Expect = 0.025
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 274 SSPAPTPSFWSSVPVMG----PSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPR 329
S+P P PS +SVP P+ +P A++ VP++ L+P A++ + P +P
Sbjct: 1751 SAPLP-PSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPV 1809
Query: 330 YRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQR-----PSSTGPPLPPASP 384
+V+ +S + +S S PA A +P + AS S S++ P L A
Sbjct: 1810 SASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASALA 1869
Query: 385 SATSRRPSSLRISPS 399
S ++ P+ SP+
Sbjct: 1870 STSAPTPAPAASSPA 1884
Score = 34.7 bits (78), Expect = 0.61
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 284 SSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSG 343
+SVP + + PS +AS A S PL A+ T + S+P P + P +S
Sbjct: 1744 ASVPPLASAPLPPSTSASVPASTSAPL----PATLTPVPASTSAP--VPASTLAPVLAST 1797
Query: 344 VSILSSSPSPP--ALASSPQAVPASSSRQRPSSTGPPLPPASPS---ATSRRPSSLRISP 398
+ + +SP P A AS +VPAS+S +S+ P +P+ A+ P+S+ I
Sbjct: 1798 SAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILA 1857
Query: 399 S 399
S
Sbjct: 1858 S 1858
Score = 33.5 bits (75), Expect = 1.4
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 298 RAASQLAVP---STPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPP 354
+A S +VP S PL P ++AS A+ S P P T+T AS+ + +S+ +P
Sbjct: 1739 QAQSSASVPPLASAPLPPSTSASVPASTSAPL-----PATLTPVPASTSAPVPASTLAP- 1792
Query: 355 ALASSPQAVPASSSRQRPSSTGPPLP-PASPSATSRRPSS 393
LAS+ VPAS +S PAS SA + SS
Sbjct: 1793 VLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSS 1832
Score = 30.8 bits (68), Expect = 8.8
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 340 ASSGVSILSSSPSPPALASSPQAVPASSSRQR-------PSSTGPPLP-----PASPSAT 387
+S+ V L+S+P PP+ ++S VPAS+S P+ST P+P P S +
Sbjct: 1742 SSASVPPLASAPLPPSTSAS---VPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTS 1798
Query: 388 SRRPSSLRISPSLGASGGAS 407
+ P+S S AS AS
Sbjct: 1799 APVPASPLAPVSASASVSAS 1818
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 49.7 bits (117), Expect = 2e-05
Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 274 SSPAPTPSFWSSVPVMGPSLASPS-RAASQLAVPSTPLSPHSAASG--TAAGSQPSSPRY 330
++PAP P+ P P+LAS + + ++ VP P SP S TAA + + R
Sbjct: 509 TTPAPAPA---PAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRT 565
Query: 331 ------RPYTVTHPWASSGVSILSSSPSPPALAS--SPQAVPAS--SSRQRPSSTGPPLP 380
RP T+ P S S + P PP S +PQA+P S R + PPLP
Sbjct: 566 KRPAPARP-TMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLP 624
Query: 381 PASPSATSRRPSSLRISPSLGASGGAS 407
P P R+ SPS + G AS
Sbjct: 625 PTPPQPARRQSRRSPASPSPASPGPAS 651
Score = 39.7 bits (91), Expect = 0.019
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 291 PSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSS 350
P++ P + S+ + P+ PL P S + GT P+ P + S L +
Sbjct: 573 PTMPPPQVSGSRSSPPAPPLPPGSGSPGT--------PQALPRRLVG-------SSLRAP 617
Query: 351 PSPPALASSPQAVPASSSRQRPSSTGPPLP-PASPSATS-RRPSSLRISPSLGASGGA 406
PP L +P SR+ P+S P P PASPS S P+ + + + A GGA
Sbjct: 618 TVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAAT-AEGGA 674
Score = 30.8 bits (68), Expect = 8.8
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 12 RRLARLAGGQTSQPTTPLTSPQRENPPGPPI--AASAPGPSQSL-------GLNVHNMTP 62
RR R A + + P P S R +PP PP+ + +PG Q+L L + P
Sbjct: 563 RRTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPP 621
Query: 63 ATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCE 114
P R QS +S S + SLS +D+ + E
Sbjct: 622 PLPPTPPQPA--RRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATAE 671
>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
Length = 743
Score = 48.9 bits (115), Expect = 3e-05
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 262 SFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAA 321
S G +S S + P+PT S+ PSL + S A + P PL+ + + +
Sbjct: 441 SSGGTSSSPIKAIFPSPT-----SLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVT 495
Query: 322 GSQPSSPRYRPYTV-THPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLP 380
G+ ++ + T P ASS V+ S SPSP A AS+ +A AS + +++ P
Sbjct: 496 GTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSS 555
Query: 381 PASPSATSRRPSSLRISPSLGASGGA 406
P S S L+ + + G A
Sbjct: 556 PLGTSQVMVTASGLQTAAAAALQGAA 581
Score = 37.0 bits (84), Expect = 0.12
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 214 TQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYE 273
T N A++ +T+ P ++A SP + +P S S AS + + ++
Sbjct: 497 TSDTTSNNTATVISTAPPASSAVTSP------SLSPSPSASAS-TSEASSASETSTTQTT 549
Query: 274 SSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPY 333
S+P +P S V V L + + AA Q A P + AA AAG PS
Sbjct: 550 STPLSSPLGTSQVMVTASGLQTAAAAALQGAA-QLPANASLAAMAAAAGLNPS------- 601
Query: 334 TVTHPWASSGVSILSSSPSPPALASSPQAVPASS-SRQRPSSTGPPLPPASPSAT 387
+ ++G ++LS +P + A SP + S+ + + ++G LP S AT
Sbjct: 602 LMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQALASGGSLPITSLDAT 656
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 48.9 bits (115), Expect = 3e-05
Identities = 59/206 (28%), Positives = 85/206 (41%), Gaps = 40/206 (19%)
Query: 219 ENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAP 278
E P+A+ TAT+ +A P R L G P V S G + P
Sbjct: 2124 EGPYAAATATAVSLAQLG-GPGRAGL-------GRQPPGGCVLSLGLLN--------PVA 2167
Query: 279 TPSFWSSVPVM---GPSLASPSRAASQLAVPSTPLSPHS------AASG-----TAAGSQ 324
P W+ +P GPS P QL P TP+SP A G AAG+
Sbjct: 2168 VPLDWARLPPPAPPGPSFLLPLAPGPQLLNPGTPVSPQERPPPYLAVPGHGEEYPAAGAH 2227
Query: 325 PSSPRYRPYTVT--HPWASSGVSILS--SSPSPPALA--SSPQAVPASSSRQRPSSTG-- 376
S P+ R V HP+ + +SPSPP+L+ S PA+++ ++TG
Sbjct: 2228 SSPPKARFLRVPSEHPYLTPSPESPEHWASPSPPSLSDWSESTPSPATATGAMATTTGAL 2287
Query: 377 --PPLPPASPSATSRRPSSLRISPSL 400
PLP + PS+ ++ + L P +
Sbjct: 2288 PAQPLPLSVPSSLAQAQTQLGPQPEV 2313
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 48.5 bits (114), Expect = 4e-05
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 276 PAPTPSFWSSVPVMGPSLASPSRAASQLA---VPSTPLSPHSAASGTAAGSQPSSPRYRP 332
PAPT V P+L +PS ++ QL +P+ P SP + P P P
Sbjct: 733 PAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPP--PPLLP 790
Query: 333 YTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPS 392
TV P SS S PSP + A++ +P S PS + P+PP P ++ P
Sbjct: 791 -TVPLPAPSSSASP-HPCPSPLSNATAQSPLPILSPTVSPSPS--PIPPVEPLMSAASPG 846
Query: 393 SLRISPSLGASGGASNWDSYS 413
+S S +S +S++ S S
Sbjct: 847 PPTLSSSSSSSSSSSSFSSSS 867
Score = 48.1 bits (113), Expect = 5e-05
Identities = 101/422 (23%), Positives = 157/422 (37%), Gaps = 64/422 (15%)
Query: 21 QTSQPTTPLTSPQRENPPGPPIAASAPG---PSQSLGLNVHNMTPATSPIGASGVAHRSQ 77
QT TP E P+ SAP P S +P +SP + + +
Sbjct: 495 QTQDKLTPAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGK 554
Query: 78 SSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRR 137
S+G ++ + + S +++ +S S S + + G +++S D M +
Sbjct: 555 PSDGKAAWTDAGLTSKKSKLESHSDSPAWSLSGRDERETVSPPCFDE--YKMSKEWTASS 612
Query: 138 EKRSLSDKEP---SSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEV 194
S+ +++P SSG + E + V W+ + LS K
Sbjct: 613 AFSSVCNQQPLDLSSGVKQKAEGTGKTP-----VQWES-------VLDLSVHKKHCSDSE 660
Query: 195 FSDFKDLIGQ---------------ILMEVLMMSTQTRD---ENPFASLTATSQPIAAAA 236
+FK+ +L +VL+ D ENP A T + P +
Sbjct: 661 GKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNEYNGIDLPVENP-ADGTRSPSPCKSLE 719
Query: 237 RSPDRNLLLNTG-------SNPGTSPMFCSVASFGASS------LSSLYESSPAPTPSFW 283
PD +L +G S P P ++ + SS L SSP P P
Sbjct: 720 AQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVL 779
Query: 284 SSV---PVMGPS--LASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
+ P + P+ L +PS +AS PS PLS +A S S SP P P
Sbjct: 780 TVATPPPPLLPTVPLPAPSSSASPHPCPS-PLSNATAQSPLPILSPTVSPSPSPIPPVEP 838
Query: 339 WASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISP 398
S+ +SP PP L+SS + +SSS SS+ P PP + +S S +
Sbjct: 839 LMSA------ASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEA 892
Query: 399 SL 400
SL
Sbjct: 893 SL 894
Score = 31.2 bits (69), Expect = 6.8
Identities = 45/163 (27%), Positives = 59/163 (36%), Gaps = 37/163 (22%)
Query: 25 PTTPLTSPQRENPPGP--------------PIAASAPGPSQSLGLNVHNMTPATSP---- 66
PT PL +P P P PI + PS S V + A SP
Sbjct: 790 PTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPT 849
Query: 67 IGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGI 126
+ +S + S SS SS SSSPS LS S+ G + E S+ +
Sbjct: 850 LSSSSSSSSSSSSFSSSSSSSSPS------PPPLSAISSVVSSGDNLEASLPMISF---- 899
Query: 127 ENMEVDENDRREKRSLSDKEPSSGPE----VSEEQALQLVCKI 165
E EN+ + R +EP S E V E VC +
Sbjct: 900 -KQEELENEGLKPR----EEPQSAAEQDVVVQETFNKNFVCNV 937
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 48.5 bits (114), Expect = 4e-05
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 276 PAPTPSFWSSVPVMGPSLASPSRAASQLA---VPSTPLSPHSAASGTAAGSQPSSPRYRP 332
PAPT V P+L +PS ++ QL +P+ P SP + P P P
Sbjct: 934 PAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPP--PPLLP 991
Query: 333 YTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPS 392
TV P SS S PSP + A++ +P S PS + P+PP P ++ P
Sbjct: 992 -TVPLPAPSSSASP-HPCPSPLSNATAQSPLPILSPTVSPSPS--PIPPVEPLMSAASPG 1047
Query: 393 SLRISPSLGASGGASNWDSYS 413
+S S +S +S++ S S
Sbjct: 1048 PPTLSSSSSSSSSSSSFSSSS 1068
Score = 48.1 bits (113), Expect = 5e-05
Identities = 101/422 (23%), Positives = 157/422 (37%), Gaps = 64/422 (15%)
Query: 21 QTSQPTTPLTSPQRENPPGPPIAASAPG---PSQSLGLNVHNMTPATSPIGASGVAHRSQ 77
QT TP E P+ SAP P S +P +SP + + +
Sbjct: 696 QTQDKLTPAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGK 755
Query: 78 SSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRR 137
S+G ++ + + S +++ +S S S + + G +++S D M +
Sbjct: 756 PSDGKAAWTDAGLTSKKSKLESHSDSPAWSLSGRDERETVSPPCFDE--YKMSKEWTASS 813
Query: 138 EKRSLSDKEP---SSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEV 194
S+ +++P SSG + E + V W+ + LS K
Sbjct: 814 AFSSVCNQQPLDLSSGVKQKAEGTGKTP-----VQWES-------VLDLSVHKKHCSDSE 861
Query: 195 FSDFKDLIGQ---------------ILMEVLMMSTQTRD---ENPFASLTATSQPIAAAA 236
+FK+ +L +VL+ D ENP A T + P +
Sbjct: 862 GKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNEYNGIDLPVENP-ADGTRSPSPCKSLE 920
Query: 237 RSPDRNLLLNTG-------SNPGTSPMFCSVASFGASS------LSSLYESSPAPTPSFW 283
PD +L +G S P P ++ + SS L SSP P P
Sbjct: 921 AQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVL 980
Query: 284 SSV---PVMGPS--LASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
+ P + P+ L +PS +AS PS PLS +A S S SP P P
Sbjct: 981 TVATPPPPLLPTVPLPAPSSSASPHPCPS-PLSNATAQSPLPILSPTVSPSPSPIPPVEP 1039
Query: 339 WASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISP 398
S+ +SP PP L+SS + +SSS SS+ P PP + +S S +
Sbjct: 1040 LMSA------ASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEA 1093
Query: 399 SL 400
SL
Sbjct: 1094 SL 1095
Score = 31.2 bits (69), Expect = 6.8
Identities = 45/163 (27%), Positives = 59/163 (36%), Gaps = 37/163 (22%)
Query: 25 PTTPLTSPQRENPPGP--------------PIAASAPGPSQSLGLNVHNMTPATSP---- 66
PT PL +P P P PI + PS S V + A SP
Sbjct: 991 PTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPT 1050
Query: 67 IGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGI 126
+ +S + S SS SS SSSPS LS S+ G + E S+ +
Sbjct: 1051 LSSSSSSSSSSSSFSSSSSSSSPS------PPPLSAISSVVSSGDNLEASLPMISF---- 1100
Query: 127 ENMEVDENDRREKRSLSDKEPSSGPE----VSEEQALQLVCKI 165
E EN+ + R +EP S E V E VC +
Sbjct: 1101 -KQEELENEGLKPR----EEPQSAAEQDVVVQETFNKNFVCNV 1138
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 48.5 bits (114), Expect = 4e-05
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 276 PAPTPSFWSSVPVMGPSLASPSRAASQLA---VPSTPLSPHSAASGTAAGSQPSSPRYRP 332
PAPT V P+L +PS ++ QL +P+ P SP + P P P
Sbjct: 934 PAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPP--PPLLP 991
Query: 333 YTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPS 392
TV P SS S PSP + A++ +P S PS + P+PP P ++ P
Sbjct: 992 -TVPLPAPSSSASP-HPCPSPLSNATAQSPLPILSPTVSPSPS--PIPPVEPLMSAASPG 1047
Query: 393 SLRISPSLGASGGASNWDSYS 413
+S S +S +S++ S S
Sbjct: 1048 PPTLSSSSSSSSSSSSFSSSS 1068
Score = 48.1 bits (113), Expect = 5e-05
Identities = 101/422 (23%), Positives = 157/422 (37%), Gaps = 64/422 (15%)
Query: 21 QTSQPTTPLTSPQRENPPGPPIAASAPG---PSQSLGLNVHNMTPATSPIGASGVAHRSQ 77
QT TP E P+ SAP P S +P +SP + + +
Sbjct: 696 QTQDKLTPAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGK 755
Query: 78 SSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRR 137
S+G ++ + + S +++ +S S S + + G +++S D M +
Sbjct: 756 PSDGKAAWTDAGLTSKKSKLESHSDSPAWSLSGRDERETVSPPCFDE--YKMSKEWTASS 813
Query: 138 EKRSLSDKEP---SSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEV 194
S+ +++P SSG + E + V W+ + LS K
Sbjct: 814 AFSSVCNQQPLDLSSGVKQKAEGTGKTP-----VQWES-------VLDLSVHKKHCSDSE 861
Query: 195 FSDFKDLIGQ---------------ILMEVLMMSTQTRD---ENPFASLTATSQPIAAAA 236
+FK+ +L +VL+ D ENP A T + P +
Sbjct: 862 GKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNEYNGIDLPVENP-ADGTRSPSPCKSLE 920
Query: 237 RSPDRNLLLNTG-------SNPGTSPMFCSVASFGASS------LSSLYESSPAPTPSFW 283
PD +L +G S P P ++ + SS L SSP P P
Sbjct: 921 AQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVL 980
Query: 284 SSV---PVMGPS--LASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
+ P + P+ L +PS +AS PS PLS +A S S SP P P
Sbjct: 981 TVATPPPPLLPTVPLPAPSSSASPHPCPS-PLSNATAQSPLPILSPTVSPSPSPIPPVEP 1039
Query: 339 WASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISP 398
S+ +SP PP L+SS + +SSS SS+ P PP + +S S +
Sbjct: 1040 LMSA------ASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEA 1093
Query: 399 SL 400
SL
Sbjct: 1094 SL 1095
Score = 31.2 bits (69), Expect = 6.8
Identities = 45/163 (27%), Positives = 59/163 (36%), Gaps = 37/163 (22%)
Query: 25 PTTPLTSPQRENPPGP--------------PIAASAPGPSQSLGLNVHNMTPATSP---- 66
PT PL +P P P PI + PS S V + A SP
Sbjct: 991 PTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPT 1050
Query: 67 IGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGI 126
+ +S + S SS SS SSSPS LS S+ G + E S+ +
Sbjct: 1051 LSSSSSSSSSSSSFSSSSSSSSPS------PPPLSAISSVVSSGDNLEASLPMISF---- 1100
Query: 127 ENMEVDENDRREKRSLSDKEPSSGPE----VSEEQALQLVCKI 165
E EN+ + R +EP S E V E VC +
Sbjct: 1101 -KQEELENEGLKPR----EEPQSAAEQDVVVQETFNKNFVCNV 1138
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 48.1 bits (113), Expect = 5e-05
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 25/221 (11%)
Query: 208 EVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNP-GTSPMFCSVASFGAS 266
E L S+ + P + AT+ P+ A+ P + S P T+ ++AS +
Sbjct: 293 EALRRSSTPIEHAPVCTSQATT-PLLPASAQPPAAASPSAASPPLATAAAHTAIASASTT 351
Query: 267 SLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASG-TAAGSQP 325
+ +S SP P S +S P++A+ S A+ + P +P T A +P
Sbjct: 352 APASSPADSPRPQASSYS------PAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRP 405
Query: 326 SSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPS 385
S + P + P + S +PSP A A +P PA + P+ T P P +PS
Sbjct: 406 SVYQPVPASTYSPSPGANYSPTPYTPSP-APAYTPSPAPAYTPSPVPTYTPSPAPAYTPS 464
Query: 386 -ATSRRPSSLRISPSLGASGGASN------W---DSYSDHF 416
A + P+ PS+ SGG + W DS+S F
Sbjct: 465 PAPNYNPA-----PSVAYSGGPAEPASRPPWVTDDSFSQKF 500
Score = 32.3 bits (72), Expect = 3.0
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 19/80 (23%)
Query: 22 TSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEG 81
TSQ TTPL P PP AA++P A SP A+ AH + +S
Sbjct: 309 TSQATTPLL-PASAQPP----AAASPS--------------AASPPLATAAAHTAIASAS 349
Query: 82 VSSLSSSPSNSLETQSQSLS 101
++ +SSP++S Q+ S S
Sbjct: 350 TTAPASSPADSPRPQASSYS 369
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 47.8 bits (112), Expect = 7e-05
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 213 STQTRDENPFASLTATSQPI----AAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSL 268
STQ P S TAT+ + A + SP L + T+P S + +SSL
Sbjct: 4474 STQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSL 4533
Query: 269 SSLY---ESSPAPTPSFWSSVPVMGP----------SLASPSRAASQLAVPS-TPLSPHS 314
+ + + PT + ++ P P + A+ + A +A PS TP + H+
Sbjct: 4534 GTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHT 4593
Query: 315 AASGTAAGSQ-PSSPRYRPYTVTHP--WASSGVSILSSSPSPPALASSPQAVPASSSRQR 371
T + ++P P T P W S+ + +++P+ +P ++P ++ R
Sbjct: 4594 TKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTAR 4653
Query: 372 -------PSSTGPPLPPASPSATSRRPSSL-RISPSLGASGGASN 408
+TG P+S + TS P SL + ++ A+G +N
Sbjct: 4654 VLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTN 4698
Score = 45.4 bits (106), Expect = 3e-04
Identities = 56/206 (27%), Positives = 85/206 (41%), Gaps = 37/206 (17%)
Query: 225 LTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTP---- 280
LT T+ +A + + + +G+ P + ++ + G+++ S S+P TP
Sbjct: 3365 LTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPS---STPGTTPIPPV 3421
Query: 281 -SFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPW 339
+ ++ P S +PS A L TP P++ A+ PSSP +TV W
Sbjct: 3422 LTTTATTPAATSSTVTPSSA---LGTTHTPPVPNTTATTHGRSLPPSSP----HTVRTAW 3474
Query: 340 ASSGVSILS----------SSPSPPALASSPQ-AVPASSSRQRPSST--GPPLP----PA 382
S+ IL +S +P A S+ Q + PA SS S T PP P P
Sbjct: 3475 TSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPALSSPHPSSRTTESPPSPGTTTPG 3534
Query: 383 SPSATSR-----RPSSLRISPSLGAS 403
TSR PS R S L +S
Sbjct: 3535 HTRGTSRTTATATPSKTRTSTLLPSS 3560
Score = 43.9 bits (102), Expect = 0.001
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 202 IGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVA 261
+ Q MST T P + T+T A A + + S PGT+ V
Sbjct: 1998 LSQTTTPTATMSTATPSSTPETAHTSTVLT-ATATTTGATGSVATPSSTPGTAHT-TKVP 2055
Query: 262 SFGASSLSSLYESSP--APTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGT 319
+ + ++ SSP A TP W S + +P+ S + S P + H+A T
Sbjct: 2056 TTTTTGFTATPSSSPGTALTPPVWIS------TTTTPTTRGSTVTPSSIPGTTHTATVLT 2109
Query: 320 AAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSST--GP 377
+ TV ++ S +S +PP+L ++ + A+ S PSST
Sbjct: 2110 TTTT----------TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTT 2159
Query: 378 PLPPA-SPSATSRRPSSLRISPS 399
P+PP + +AT+ +S ++PS
Sbjct: 2160 PIPPVLTTTATTPAATSNTVTPS 2182
Score = 43.9 bits (102), Expect = 0.001
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 37/206 (17%)
Query: 225 LTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTP---- 280
LT T+ +A + + + +G+ P + ++ + G+++ S S+P TP
Sbjct: 2665 LTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPS---STPGTTPIPPV 2721
Query: 281 -SFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPW 339
+ ++ P S +PS A L TP P++ A+ PSS P+TV W
Sbjct: 2722 LTTTATTPAATSSTVTPSSA---LGTTHTPPVPNTTATTHGRSLSPSS----PHTVRTAW 2774
Query: 340 ASSGVSIL----------SSSPSPPALASSPQ-AVPASSSRQRPSST--GPPLP----PA 382
S+ L +S +P A + Q + PA SS S T PP P P
Sbjct: 2775 TSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPG 2834
Query: 383 SPSATSR-----RPSSLRISPSLGAS 403
ATSR PS R S L +S
Sbjct: 2835 HTRATSRTTATATPSKTRTSTLLPSS 2860
Score = 43.9 bits (102), Expect = 0.001
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 39/209 (18%)
Query: 213 STQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLY 272
STQ P S TAT+ + ++ +P S+PGT A++L +L
Sbjct: 3746 STQATAGTPHVSTTATTPTVTSSKATPF--------SSPGT-----------ATALPALR 3786
Query: 273 ESSPAPTPSFWSSVPVMG--------PSLASPSRAASQLAVPSTPLSPHS-------AAS 317
++ PT + ++++P +P+ S STP + H+ A +
Sbjct: 3787 STATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATT 3846
Query: 318 GTAAGS--QPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSST 375
A GS PSS +T P ++ ++ S SP + P + +++ P+++
Sbjct: 3847 TRATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTT---PTTS 3903
Query: 376 GPPLPPASPSATSRRPSSLRISPSLGASG 404
G + P+S T+ P+ L + + A+G
Sbjct: 3904 GSTVTPSSVPGTTHTPTVLTTTTTTVATG 3932
Score = 43.5 bits (101), Expect = 0.001
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 37/206 (17%)
Query: 225 LTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTP---- 280
LT T+ +A + + + +G+ P ++ + G+++ S S+P TP
Sbjct: 3922 LTTTTTTVATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPS---STPGTTPIPPV 3978
Query: 281 -SFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPW 339
+ ++ P S +PS A L TP P++ A+ PSS P+TV W
Sbjct: 3979 LTTTATTPAATSSTVTPSSA---LGTTHTPPVPNTTATTHGRSLSPSS----PHTVRTAW 4031
Query: 340 ASSGVSIL----------SSSPSPPALASSPQ-AVPASSSRQRPSST--GPPLP----PA 382
S+ L +S +P A + Q + PA SS S T PP P P
Sbjct: 4032 TSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTPG 4091
Query: 383 SPSATSR-----RPSSLRISPSLGAS 403
+ATSR PS R S L +S
Sbjct: 4092 HTTATSRTTATATPSKTRTSTLLPSS 4117
Score = 43.1 bits (100), Expect = 0.002
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 39/207 (18%)
Query: 225 LTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWS 284
LT T+ +A + + + +G+ P + ++ + G+++ +P+ TP
Sbjct: 2108 LTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTT-------NPSSTPGTTP 2160
Query: 285 SVPVMGPSLASPSRAA------SQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
PV+ + +P+ + S L TP P++ A+ PSS P+TV
Sbjct: 2161 IPPVLTTTATTPAATSNTVTPSSALGTTHTPPVPNTMATTHGRSLPPSS----PHTVRTA 2216
Query: 339 W--ASSGV---------SILSSSPSPPALASSPQAVPASSSRQRPSST--GPPLP----P 381
W A+SG+ S ++S ++ + PA SS S T PP P P
Sbjct: 2217 WTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPALSSPHPSSRTTESPPSPGTTTP 2276
Query: 382 ASPSATSR-----RPSSLRISPSLGAS 403
+ATSR PS R S L +S
Sbjct: 2277 GHTTATSRTTATATPSKTRTSTLLPSS 2303
Score = 42.0 bits (97), Expect = 0.004
Identities = 108/491 (21%), Positives = 173/491 (35%), Gaps = 97/491 (19%)
Query: 12 RRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASA-------PGPSQSLGL-------NV 57
R + L T PTTP S + P P +A S PG + SLG +
Sbjct: 1664 RYTSTLGTATTGGPTTPAGSTE---PTVPGVATSTLPTRSALPGTTGSLGTWRPSQPPTL 1720
Query: 58 HNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSM 117
T ATS +G A + +SL+ + ++ L T S ++ +
Sbjct: 1721 APTTMATSRARPTGTASTASKEPLTTSLAPTLTSELSTSQAETSTPRTETTMSPLTNTTT 1780
Query: 118 SQ--------------VDVD---SGIE--NMEVDENDRREKRSLS------DKEPSSGPE 152
SQ DVD SG+ +ME EN R + + + PE
Sbjct: 1781 SQGTTRCQPKCEWTEWFDVDFPTSGVAGGDMETFENIRAAGGKMCWAPKSIECRAENYPE 1840
Query: 153 VSEEQALQ-LVCKIFR-VSWKDRDRDVIFLSSLSAQ--------FKQNPKEVFSDFKDLI 202
VS +Q Q L C + ++ K+ D+ F + + P +
Sbjct: 1841 VSIDQVGQVLTCSLETGLTCKNEDQTGRFNMCFNYNVRVLCCDDYSHCPSTPATSSTATP 1900
Query: 203 GQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVAS 262
+++ T AS +T+ P + +P +L T + P + + +S
Sbjct: 1901 SSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSS 1960
Query: 263 FGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVP----------STPLSP 312
++ + S A TP+ S P+ SL + SQ P STP +
Sbjct: 1961 SPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETA 2020
Query: 313 HSA----ASGTAAGSQ-----PSSPRYRPYTVTHPWASSG--VSILSSSP----SPPALA 357
H++ A+ T G+ PSS +T P ++ + SSSP +PP
Sbjct: 2021 HTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWI 2080
Query: 358 SSPQAVPASSSRQRPSS-------------------TGPPLPPASPSATSRRPSSL-RIS 397
S+ S PSS TG P+S + TS P SL +
Sbjct: 2081 STTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTA 2140
Query: 398 PSLGASGGASN 408
++ A+G +N
Sbjct: 2141 TTITATGSTTN 2151
Score = 41.6 bits (96), Expect = 0.005
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 19/201 (9%)
Query: 202 IGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVA 261
+ Q MST T P T+T A ++ S PGT+
Sbjct: 2555 LSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVA-TPSSTPGTAH-----T 2608
Query: 262 SFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAA 321
+ ++ ++ + ++P+ +P ++PV + +P+ S + S P + H+ T
Sbjct: 2609 TKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPTVLTTT 2668
Query: 322 GSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSST--GPPL 379
+ TV ++ S +S +PP+L ++ + A+ S PSST P+
Sbjct: 2669 TT----------TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPI 2718
Query: 380 PPA-SPSATSRRPSSLRISPS 399
PP + +AT+ +S ++PS
Sbjct: 2719 PPVLTTTATTPAATSSTVTPS 2739
Score = 40.4 bits (93), Expect = 0.011
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 23/203 (11%)
Query: 202 IGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVA 261
+ Q MST T P T+T ++ S PGT+ V
Sbjct: 3255 LSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVA-TPSSTPGTAHT-TKVP 3312
Query: 262 SFGASSLSSLYESSP--APTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGT 319
+ + ++ SSP A TP W S + +P+ S + S P + H+A T
Sbjct: 3313 TTTTTGFTATPSSSPGTALTPPVWIS------TTTTPTTRGSTVTPSSIPGTTHTATVLT 3366
Query: 320 AAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPSST--GP 377
+ TV ++ S +S +PP+L ++ + A+ S PSST
Sbjct: 3367 TTTT----------TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTT 3416
Query: 378 PLPPA-SPSATSRRPSSLRISPS 399
P+PP + +AT+ +S ++PS
Sbjct: 3417 PIPPVLTTTATTPAATSSTVTPS 3439
Score = 40.0 bits (92), Expect = 0.015
Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 213 STQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLY 272
STQ P S TAT+ + ++ +P S+PGT A++L +L
Sbjct: 2489 STQATAGTPHVSTTATTPTVTSSKATPF--------SSPGT-----------ATALPALR 2529
Query: 273 ESSPAPTPSFWSSVPVMG--------PSLASPSRAASQLAVPSTPLSPHSA------ASG 318
++ PT + ++++P +P+ S STP + H++ A+
Sbjct: 2530 STATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATT 2589
Query: 319 TAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPA-SSSRQRPSSTGP 377
T A ++P P T H + + +P + + + +P S+ P++ G
Sbjct: 2590 TGATGSVATPSSTPGTA-HTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGS 2648
Query: 378 PLPPASPSATSRRPSSLRISPSLGASG 404
+ P+S T+ P+ L + + A+G
Sbjct: 2649 TVTPSSIPGTTHTPTVLTTTTTTVATG 2675
Score = 39.3 bits (90), Expect = 0.025
Identities = 54/223 (24%), Positives = 85/223 (38%), Gaps = 29/223 (13%)
Query: 202 IGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVA 261
+ Q MST T P T+T A A + + S PGT+ V
Sbjct: 4540 LSQTTTPTATMSTATPSSTPETVHTSTVLT-ATATTTGATGSVATPSSTPGTAHT-TKVP 4597
Query: 262 SFGASSLSSLYESSP--APTPSFWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSA---- 315
+ + ++ SSP A TP W S P+ +P+ + S + S P + H+A
Sbjct: 4598 TTTTTGFTATPSSSPGTALTPPVWISTTTT-PTTTTPTTSGSTVTPSSIPGTTHTARVLT 4656
Query: 316 --------------ASGTAAGSQPSSPRYRPYTVTHPWASSGVSIL-SSSPSPPALASSP 360
+S T P S T+T +++ S ++P P L S+
Sbjct: 4657 TTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPITPVLTSTA 4716
Query: 361 QAVPASSSRQRPSSTGP----PLPPASPSATSRRPSSLRISPS 399
PA++S + SS+ P LP + +AT +S PS
Sbjct: 4717 -TTPAATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPS 4758
Score = 38.5 bits (88), Expect = 0.042
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 226 TATSQPI----AAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLY---ESSPAP 278
TAT+ + A + SP L + T+P SV + +SSL + + + P
Sbjct: 3202 TATTPTVISSRATPSSSPGTATALPALRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTP 3261
Query: 279 TPSFWSSVPVMGPSLASPS----------RAASQLAVPS-TPLSPHSAASGTAAGSQ-PS 326
T + ++ P P S RA +A PS TP + H+ T + +
Sbjct: 3262 TATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTA 3321
Query: 327 SPRYRPYTVTHP--WASSGVSILS--SSPSPPALASSPQAVPASSSRQRPSSTGPPLPPA 382
+P P T P W S+ + + S+ +P ++ + ++ +TG P+
Sbjct: 3322 TPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPS 3381
Query: 383 SPSATSRRPSSL-RISPSLGASGGASN 408
S + TS P SL + ++ A+G +N
Sbjct: 3382 SSTQTSGTPPSLTTTATTITATGSTTN 3408
Score = 37.0 bits (84), Expect = 0.12
Identities = 33/191 (17%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 225 LTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWS 284
LT T+ +A + + + +G+ P + ++ + G+++ +P+ TP
Sbjct: 4655 LTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTT-------NPSSTPGTTP 4707
Query: 285 SVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGV 344
PV+ + +P+ +S+ S+P + + T+ ++ ++ + P + W + V
Sbjct: 4708 ITPVLTSTATTPAATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLWTTWTV 4767
Query: 345 SILSSSP----SPPALASSPQAVPAS----SSRQRPSSTGPPLPPASPSATSRRPSSLRI 396
+++P S +S+P+ S ++ +T P+S T+R + L
Sbjct: 4768 PAQTTTPMSTMSTIHTSSTPETTHTSTVLTTTATMTRATNSTATPSSTLGTTRILTELTT 4827
Query: 397 SPSLGASGGAS 407
+ + A+ G++
Sbjct: 4828 TATTTAATGST 4838
Score = 34.3 bits (77), Expect = 0.80
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 306 PSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSG-----VSILSSSPSPPALASSP 360
PSTP + +A + G+ + +P T AS+G S L ++P P L ++
Sbjct: 1889 PSTPATSSTATPSSTPGT--TWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTA 1946
Query: 361 QAVPASSSRQRPSS---TGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHFT 417
+SS+ PSS T LP +AT+ P++ ++P +S G + W S T
Sbjct: 1947 TTPTVTSSKATPSSSPGTATALPALRSTATT--PTATSVTPIPSSSLG-TTWTRLSQTTT 2003
Score = 33.9 bits (76), Expect = 1.0
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 306 PSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPS---PPALASSPQA 362
PSTP + +A + G+ T T ++ + SS+P PP + +SP
Sbjct: 4232 PSTPATSSTAMPSSTPGTTWILTELTT-TATTTASTGSTATPSSTPGTAPPPKVLTSPAT 4290
Query: 363 VPASSSRQRPSSTGP----PLPPASPSATSRRPSSLRISPS--LGASG 404
P ++S + SS+ P LP + +AT +S+ PS LG +G
Sbjct: 4291 TPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSSTLGTTG 4338
Score = 33.5 bits (75), Expect = 1.4
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 223 ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSF 282
A+ TA++ A + +P +L S T +V + ++ SS ++ P S
Sbjct: 4431 ATTTASTGSTATPSSTPGTTWILTEPSTTAT----VTVPTGSTATASSTQATAGTPHVST 4486
Query: 283 WSSVPVMGPSLASPS----RAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
++ P + S A+PS A + A+ ST +P + + S + R T P
Sbjct: 4487 TATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTP 4546
Query: 339 WASSGVSILSSSP----SPPALASSPQAVPASSSRQRPSST 375
A+ + SS+P + L ++ A+ S PSST
Sbjct: 4547 TATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSST 4587
Score = 32.0 bits (71), Expect = 4.0
Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 27/192 (14%)
Query: 223 ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSF 282
A+ T ++ A + +P +L S T +V + ++ SS ++ P S
Sbjct: 3703 ATTTESTGSTATPSSTPGTTWILTEPSTTAT----VTVPTGSTATASSTQATAGTPHVST 3758
Query: 283 WSSVPVMGPSLA----SPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHP 338
++ P + S A SP A + A+ ST +P + + S + R T P
Sbjct: 3759 TATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTP 3818
Query: 339 WASSGVSILSSSP----SPPALASSPQAVPASSSRQRPSS---------------TGPPL 379
A+ + SS+P + L ++ A+ S PSS TG +
Sbjct: 3819 TATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTV 3878
Query: 380 PPASPSATSRRP 391
P+S T+R P
Sbjct: 3879 TPSSSPGTARTP 3890
Score = 30.8 bits (68), Expect = 8.8
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 245 LNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTP-SFW---------SSVPVMGPSLA 294
++ S P T+ + + ++ ++ S+P+ TP + W ++ GP+ A
Sbjct: 4354 IHPSSTPETTHTSTVLTTKATTTRATSSTSTPSSTPGTTWILTELTTAATTTAATGPT-A 4412
Query: 295 SPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPP 354
+PS + + + + + T + + PSS + +T P ++ V++ + S
Sbjct: 4413 TPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGS---T 4469
Query: 355 ALASSPQAVP----ASSSRQRPSSTGPPLPPASPSATSRRPSSLR 395
A ASS QA S++ P+ T P+S T+ +LR
Sbjct: 4470 ATASSTQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALR 4514
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 47.8 bits (112), Expect = 7e-05
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 292 SLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSP--RYRPYTVTHPWASSGVSILSS 349
S+A A P P P S++S +++ S PS P + P + P A+ G+S L S
Sbjct: 27 SMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPP-ATGGLSSLGS 85
Query: 350 SPSPPALASSPQAVPASSSR-QRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGAS 407
P + A++P + SR P ++G LP ASPS +S SS + S A+ A+
Sbjct: 86 PPQQLS-AATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAA 143
Score = 33.9 bits (76), Expect = 1.0
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 25/174 (14%)
Query: 221 PFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTP 280
P +++S ++++ SP L T + G P A+ G SSL S + A TP
Sbjct: 44 PAGPPSSSSSSSSSSSPSPP----LGTHNPGGLKPP----ATGGLSSLGSPPQQLSAATP 95
Query: 281 SFWSSVPVMGPSLASPSR-AASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPW 339
+ + L+ PS AS A+PS S S++S ++A + +S
Sbjct: 96 HGINDI------LSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAA 149
Query: 340 ASSGVSI---------LSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASP 384
ASS + LS P PP L SP A ++ + P LP +P
Sbjct: 150 ASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLA-ELPGRTP 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,787,646
Number of Sequences: 37866
Number of extensions: 2583041
Number of successful extensions: 26007
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 1151
Number of HSP's that attempted gapping in prelim test: 18489
Number of HSP's gapped (non-prelim): 7141
length of query: 1302
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1188
effective length of database: 13,930,794
effective search space: 16549783272
effective search space used: 16549783272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.