Guide to the Human Genome
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Name: CSAG2 Sequence: fasta or formatted (127aa) NCBI GI: 157502216
Description:

CSAG family, member 2 isoform 1

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [110aa] CSAG family, member 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          6           1
 C cysteine            1.6          2           1
 D aspartate           3.1          4           1
 E glutamate           6.3          8           1
 F phenylalanine       3.9          5           1
 G glycine             9.4         12           1
 H histidine           2.4          3           1
 I isoleucine          2.4          3           1
 K lysine              9.4         12           1
 L leucine             8.7         11           2
 M methionine          3.1          4           1
 N asparagine          3.1          4           2
 P proline            11.0         14           2
 Q glutamine           3.1          4           1
 R arginine            9.4         12           2
 S serine              6.3          8           2
 T threonine           3.1          4           1
 V valine              4.7          6           1
 W tryptophan          3.1          4           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CSAG family, member 2 isoform 1 
CSAG3                 1.000   CSAG family, member 3 isoform a 
CSAG2                 0.810   CSAG family, member 2 isoform 2 
CSAG3                 0.810   CSAG family, member 3 isoform b 
LOC100130935          0.782   PREDICTED: similar to CSAG family, member 2 
LOC100130935          0.782   PREDICTED: similar to CSAG family, member 2 
LOC100130935          0.770   PREDICTED: similar to CSAG family, member 2 
CSAG1                 0.419   chondrosarcoma associated gene 1 
CSAG1                 0.419   chondrosarcoma associated gene 1 
C15orf39              0.036   hypothetical protein LOC56905 
BLNK                  0.028   B-cell linker isoform 1 
COL9A2                0.028   alpha 2 type IX collagen 
COL3A1                0.024   collagen type III alpha 1 preproprotein 
ZNF324                0.024   zinc finger protein 324 
EDA                   0.020   ectodysplasin A isoform EDA-A2 
EDA                   0.020   ectodysplasin A isoform EDA-A1 
CLDN19                0.020   claudin 19 isoform a 
NIPBL                 0.020   delangin isoform B 
NIPBL                 0.020   delangin isoform A 
AEBP1                 0.020   adipocyte enhancer binding protein 1 precursor [Homo...
KLRG2                 0.020   killer cell lectin-like receptor subfamily G, member...
SMG7                  0.020   SMG-7 homolog isoform 1 
SMG7                  0.020   SMG-7 homolog isoform 4 
SMG7                  0.020   SMG-7 homolog isoform 2 
MIXL1                 0.020   Mix-like homeobox protein 1 
COL18A1               0.016   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.016   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.016   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
COL6A2                0.016   alpha 2 type VI collagen isoform 2C2a' precursor [H...
COL6A2                0.016   alpha 2 type VI collagen isoform 2C2a precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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