Guide to the Human Genome
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Name: CSAG2 Sequence: fasta or formatted (110aa) NCBI GI: 157738682
Description:

CSAG family, member 2 isoform 2

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [127aa] CSAG family, member 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          5           1
 C cysteine            1.8          2           1
 D aspartate           3.6          4           1
 E glutamate           6.4          7           1
 F phenylalanine       4.5          5           1
 G glycine             8.2          9           1
 H histidine           1.8          2           1
 I isoleucine          2.7          3           1
 K lysine             10.0         11           1
 L leucine             8.2          9           2
 M methionine          3.6          4           1
 N asparagine          2.7          3           2
 P proline            10.0         11           2
 Q glutamine           3.6          4           1
 R arginine            9.1         10           1
 S serine              5.5          6           2
 T threonine           3.6          4           1
 V valine              5.5          6           1
 W tryptophan          3.6          4           1
 Y tyrosine            0.9          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CSAG family, member 2 isoform 2 
CSAG3                 1.000   CSAG family, member 3 isoform b 
LOC100130935          0.962   PREDICTED: similar to CSAG family, member 2 
LOC100130935          0.962   PREDICTED: similar to CSAG family, member 2 
LOC100130935          0.953   PREDICTED: similar to CSAG family, member 2 
CSAG2                 0.948   CSAG family, member 2 isoform 1 
CSAG3                 0.948   CSAG family, member 3 isoform a 
CSAG1                 0.542   chondrosarcoma associated gene 1 
CSAG1                 0.542   chondrosarcoma associated gene 1 
KIAA1602              0.019   hypothetical protein LOC57701 
COL4A1                0.014   alpha 1 type IV collagen preproprotein 
CFH                   0.014   complement factor H isoform a precursor 
MMP24                 0.014   matrix metalloproteinase 24 preproprotein 
PCLO                  0.014   piccolo isoform 2 
PCLO                  0.014   piccolo isoform 1 
VPS37C                0.014   vacuolar protein sorting 37C 
ZNF324                0.014   zinc finger protein 324 
CIR1                  0.014   CBF1 interacting corepressor 
SORBS2                0.014   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.014   sorbin and SH3 domain containing 2 isoform 4 
SFRP4                 0.014   secreted frizzled-related  protein 4 
LOC100290741          0.014   PREDICTED: hypothetical protein XP_002346521 
LOC100288445          0.014   PREDICTED: hypothetical protein XP_002342359 
ZNF324B               0.014   zinc finger protein 324B 
TLE4                  0.014   transducin-like enhancer protein 4 
LOC100133500          0.009   PREDICTED: hypothetical protein 
LOC100292454          0.009   PREDICTED: similar to hCG2019076 
LOC100292294          0.009   PREDICTED: hypothetical protein 
LOC100133500          0.009   PREDICTED: hypothetical protein 
LOC100287166          0.009   PREDICTED: similar to hCG2019076 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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