LMCD1 35712

Name: LMCD1	Sequence: fasta or formatted (365aa)		NCBI GI: 7657309
Description: LIM and cysteine-rich domains 1		Referenced in: LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 21 2 C cysteine 5.8 21 1 D aspartate 5.2 19 2 E glutamate 7.7 28 2 F phenylalanine 2.2 8 1 G glycine 8.8 32 2 H histidine 1.9 7 1 I isoleucine 3.6 13 2 K lysine 8.5 31 2 L leucine 8.5 31 2 M methionine 2.2 8 1 N asparagine 1.6 6 1 P proline 6.0 22 2 Q glutamine 4.7 17 2 R arginine 5.8 21 3 S serine 6.3 23 1 T threonine 5.2 19 2 V valine 4.9 18 2 W tryptophan 1.6 6 1 Y tyrosine 3.8 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM and cysteine-rich domains 1 TES 0.483 testin isoform 1 TES 0.472 testin isoform 2 PRICKLE3 0.229 LIM domain only 6 PRICKLE2 0.206 prickle-like 2 PRICKLE1 0.198 prickle homolog 1 PRICKLE1 0.198 prickle homolog 1 PRICKLE1 0.198 prickle homolog 1 PRICKLE1 0.198 prickle homolog 1 PRICKLE4 0.144 over-expressed breast tumor protein FHL1 0.064 four and a half LIM domains 1 isoform 4 FHL1 0.064 four and a half LIM domains 1 isoform 2 FHL1 0.064 four and a half LIM domains 1 isoform 1 FHL1 0.064 four and a half LIM domains 1 isoform 2 FHL1 0.064 four and a half LIM domains 1 isoform 3 FHL1 0.064 four and a half LIM domains 1 isoform 5 FHL1 0.064 four and a half LIM domains 1 isoform 2 FHL2 0.063 four and a half LIM domains 2 FHL2 0.063 four and a half LIM domains 2 FHL2 0.063 four and a half LIM domains 2 FHL2 0.063 four and a half LIM domains 2 FHL3 0.063 four and a half LIM domains 3 LDB3 0.061 LIM domain binding 3 isoform 2 LDB3 0.061 LIM domain binding 3 isoform 1 TGFB1I1 0.059 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.059 transforming growth factor beta 1 induced transcript... PDLIM7 0.059 PDZ and LIM domain 7 isoform 2 PDLIM7 0.059 PDZ and LIM domain 7 isoform 1 LOC100288695 0.057 PREDICTED: hypothetical protein XP_002342298 LIMS1 0.057 LIM and senescent cell antigen-like domains 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.