Guide to the Human Genome
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Name: ADAMTS4 Sequence: fasta or formatted (837aa) NCBI GI: 157427675
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 4 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         69           4
 C cysteine            4.2         35           1
 D aspartate           5.0         42           2
 E glutamate           3.6         30           3
 F phenylalanine       3.1         26           2
 G glycine            10.5         88           3
 H histidine           3.0         25           1
 I isoleucine          2.3         19           2
 K lysine              2.7         23           3
 L leucine            10.9         91           6
 M methionine          1.7         14           1
 N asparagine          2.4         20           2
 P proline             9.1         76           3
 Q glutamine           4.5         38           2
 R arginine            6.6         55           3
 S serine              7.2         60           3
 T threonine           5.4         45           1
 V valine              5.6         47           2
 W tryptophan          1.8         15           1
 Y tyrosine            2.3         19           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mo... 
ADAMTS1               0.447   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.403   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS8               0.380   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS5               0.319   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.305   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.300   a disintegrin-like and metalloprotease with thrombo...
ADAMTS6               0.231   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.215   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.204   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS7               0.202   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.193   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.188   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS17              0.180   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS2               0.176   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.173   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.173   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.166   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS19              0.163   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.140   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.140   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.126   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL5              0.083   ADAMTS-like 5 
PAPLN                 0.078   papilin 
ADAMTSL1              0.075   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.075   ADAMTS-like 1 isoform 2 precursor 
ADAMTSL3              0.075   ADAMTS-like 3 precursor 
ADAMTS2               0.075   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL2              0.063   ADAMTS-like 2 precursor 
ADAMTSL2              0.063   ADAMTS-like 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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