Guide to the Human Genome
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Name: ADAMTS1 Sequence: fasta or formatted (967aa) NCBI GI: 50845384
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 1 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         67           3
 C cysteine            4.9         47           1
 D aspartate           6.0         58           2
 E glutamate           5.8         56           2
 F phenylalanine       3.6         35           2
 G glycine             9.5         92           3
 H histidine           2.8         27           1
 I isoleucine          3.1         30           2
 K lysine              6.0         58           4
 L leucine             7.5         73           4
 M methionine          1.6         15           2
 N asparagine          3.4         33           2
 P proline             6.3         61           2
 Q glutamine           4.1         40           2
 R arginine            5.0         48           2
 S serine              8.4         81           2
 T threonine           5.8         56           2
 V valine              5.5         53           3
 W tryptophan          1.6         15           1
 Y tyrosine            2.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mot... 
ADAMTS15              0.453   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS8               0.428   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.387   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS5               0.350   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.319   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.305   a disintegrin-like and metalloprotease with thrombo...
ADAMTS6               0.229   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS7               0.226   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.223   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.220   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.218   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.216   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS2               0.187   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS17              0.186   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.183   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.175   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.175   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.171   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.150   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.150   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.138   ADAM metallopeptidase with thrombospondin type 1 mot...
PAPLN                 0.103   papilin 
ADAMTSL1              0.088   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.088   ADAMTS-like 1 isoform 2 precursor 
ADAMTSL3              0.087   ADAMTS-like 3 precursor 
ADAMTS2               0.075   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL5              0.066   ADAMTS-like 5 
THSD4                 0.061   thrombospondin, type I, domain containing 4 
ADAMTSL2              0.057   ADAMTS-like 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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