Guide to the Human Genome
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Name: ADAMTS18 Sequence: fasta or formatted (1221aa) NCBI GI: 40806187
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 18 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         78           3
 C cysteine            6.3         77           2
 D aspartate           2.9         36           2
 E glutamate           5.2         64           3
 F phenylalanine       3.8         46           3
 G glycine             8.6        105           3
 H histidine           2.9         36           2
 I isoleucine          3.4         42           1
 K lysine              6.8         83           2
 L leucine             7.3         89           3
 M methionine          1.2         15           1
 N asparagine          4.3         52           2
 P proline             6.2         76           2
 Q glutamine           5.3         65           2
 R arginine            5.1         62           2
 S serine              9.0        110           4
 T threonine           4.3         53           2
 V valine              5.4         66           4
 W tryptophan          2.0         24           1
 Y tyrosine            3.4         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mot... 
ADAMTS16              0.557   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS6               0.301   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.261   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.244   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS7               0.240   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS9               0.221   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.204   a disintegrin-like and metalloprotease with thrombo...
ADAMTS17              0.201   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.198   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.198   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.189   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.182   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.181   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS1               0.170   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.169   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS8               0.147   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.146   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.146   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.135   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS5               0.134   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.130   ADAM metallopeptidase with thrombospondin type 1 mo...
PAPLN                 0.123   papilin 
ADAMTSL4              0.122   thrombospondin repeat containing 1 isoform 1 
THSD4                 0.113   thrombospondin, type I, domain containing 4 
ADAMTSL4              0.103   thrombospondin repeat containing 1 isoform 2 
ADAMTSL3              0.101   ADAMTS-like 3 precursor 
ADAMTSL1              0.097   ADAMTS-like 1 isoform 4 precursor 
ADAMTS2               0.082   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL1              0.082   ADAMTS-like 1 isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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