Guide to the Human Genome
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Name: ADAMTS10 Sequence: fasta or formatted (1103aa) NCBI GI: 56121815
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 10 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         89           3
 C cysteine            6.0         66           2
 D aspartate           4.5         50           2
 E glutamate           5.3         59           3
 F phenylalanine       2.6         29           1
 G glycine             8.5         94           3
 H histidine           3.6         40           2
 I isoleucine          3.0         33           1
 K lysine              3.7         41           1
 L leucine             7.9         87           3
 M methionine          1.1         12           2
 N asparagine          2.5         28           2
 P proline             7.5         83           4
 Q glutamine           3.9         43           2
 R arginine            7.4         82           3
 S serine              8.1         89           4
 T threonine           5.3         59           2
 V valine              6.3         69           2
 W tryptophan          2.1         23           2
 Y tyrosine            2.4         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mot... 
ADAMTS6               0.612   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.289   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.283   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS7               0.282   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.265   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS9               0.246   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS20              0.239   a disintegrin-like and metalloprotease with thrombo...
ADAMTS17              0.222   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.203   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS2               0.202   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.193   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS1               0.193   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.191   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS14              0.175   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.175   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS8               0.162   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS5               0.161   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.161   ADAM metallopeptidase with thrombospondin type 1 mo...
PAPLN                 0.140   papilin 
ADAMTS13              0.138   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.138   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.129   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL1              0.115   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL3              0.112   ADAMTS-like 3 precursor 
ADAMTSL1              0.111   ADAMTS-like 1 isoform 2 precursor 
THSD4                 0.104   thrombospondin, type I, domain containing 4 
ADAMTSL4              0.102   thrombospondin repeat containing 1 isoform 1 
ADAMTSL4              0.102   thrombospondin repeat containing 1 isoform 2 
ADAMTS2               0.085   ADAM metallopeptidase with thrombospondin type 1 mot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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