Guide to the Human Genome
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Name: ADAMTS5 Sequence: fasta or formatted (930aa) NCBI GI: 195539372
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 5 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         75           5
 C cysteine            4.5         42           1
 D aspartate           4.8         45           2
 E glutamate           4.1         38           3
 F phenylalanine       2.9         27           2
 G glycine             9.9         92           3
 H histidine           3.4         32           2
 I isoleucine          3.2         30           2
 K lysine              6.3         59           3
 L leucine             8.3         77           3
 M methionine          1.1         10           1
 N asparagine          2.8         26           2
 P proline             5.3         49           2
 Q glutamine           4.0         37           2
 R arginine            6.5         60           5
 S serine              7.7         72           2
 T threonine           6.0         56           2
 V valine              6.0         56           3
 W tryptophan          1.7         16           2
 Y tyrosine            3.3         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mo... 
ADAMTS1               0.365   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.346   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS8               0.326   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS4               0.288   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS20              0.276   a disintegrin-like and metalloprotease with thrombo...
ADAMTS9               0.273   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.222   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.194   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.193   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS7               0.193   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.191   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.183   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.180   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS17              0.179   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.176   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.176   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS2               0.167   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS19              0.164   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.125   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.125   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.112   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.073   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL3              0.071   ADAMTS-like 3 precursor 
PAPLN                 0.071   papilin 
ADAMTSL5              0.070   ADAMTS-like 5 
ADAMTSL1              0.070   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.070   ADAMTS-like 1 isoform 2 precursor 
ADAMTSL2              0.068   ADAMTS-like 2 precursor 
ADAMTSL2              0.068   ADAMTS-like 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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