Guide to the Human Genome
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Name: ADAMTS16 Sequence: fasta or formatted (1224aa) NCBI GI: 110735441
Description:

ADAM metallopeptidase with thrombospondin type 1 motif, 16 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         82           4
 C cysteine            6.0         73           2
 D aspartate           3.7         45           1
 E glutamate           4.9         60           2
 F phenylalanine       2.9         36           3
 G glycine             7.9         97           3
 H histidine           4.2         52           3
 I isoleucine          2.9         35           1
 K lysine              6.0         73           2
 L leucine             7.6         93           2
 M methionine          2.1         26           2
 N asparagine          3.2         39           2
 P proline             6.9         85           4
 Q glutamine           3.9         48           1
 R arginine            6.5         79           4
 S serine              9.2        113           3
 T threonine           5.0         61           2
 V valine              5.0         61           3
 W tryptophan          2.4         29           1
 Y tyrosine            3.0         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase with thrombospondin type 1 mo... 
ADAMTS18              0.551   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.276   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.253   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS7               0.236   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.234   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS9               0.208   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS19              0.207   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS20              0.193   a disintegrin-like and metalloprotease with thrombo...
ADAMTS17              0.192   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.187   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS2               0.186   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.170   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.169   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS1               0.167   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS15              0.161   a disintegrin-like and metalloprotease (reprolysin t...
ADAMTS13              0.143   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.143   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS5               0.141   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS8               0.133   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.133   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS4               0.125   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTSL4              0.119   thrombospondin repeat containing 1 isoform 1 
PAPLN                 0.116   papilin 
THSD4                 0.108   thrombospondin, type I, domain containing 4 
ADAMTSL3              0.099   ADAMTS-like 3 precursor 
ADAMTSL1              0.097   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL4              0.095   thrombospondin repeat containing 1 isoform 2 
ADAMTS2               0.082   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL1              0.082   ADAMTS-like 1 isoform 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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