Guide to the Human Genome
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Name: ADAMTS15 Sequence: fasta or formatted (950aa) NCBI GI: 21265058
Description:

a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 15 preproprotein

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         73           2
 C cysteine            4.9         47           1
 D aspartate           5.4         51           2
 E glutamate           3.9         37           2
 F phenylalanine       3.2         30           1
 G glycine             9.9         94           3
 H histidine           2.4         23           1
 I isoleucine          2.6         25           2
 K lysine              5.2         49           2
 L leucine             9.1         86           3
 M methionine          1.2         11           2
 N asparagine          3.4         32           1
 P proline             6.9         66           2
 Q glutamine           3.4         32           2
 R arginine            7.2         68           3
 S serine              8.0         76           2
 T threonine           4.6         44           2
 V valine              6.7         64           3
 W tryptophan          1.5         14           1
 Y tyrosine            2.9         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   a disintegrin-like and metalloprotease (reprolysin t... 
ADAMTS1               0.462   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS8               0.394   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS9               0.360   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS4               0.356   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS20              0.340   a disintegrin-like and metalloprotease with thrombo...
ADAMTS5               0.338   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS7               0.235   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS6               0.232   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS10              0.225   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS18              0.221   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS12              0.219   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS16              0.213   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS2               0.210   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS17              0.203   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS3               0.197   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS19              0.192   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS14              0.190   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.189   ADAM metallopeptidase with thrombospondin type 1 mo...
ADAMTS13              0.146   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.146   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.133   ADAM metallopeptidase with thrombospondin type 1 mot...
PAPLN                 0.104   papilin 
ADAMTS2               0.092   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTSL3              0.089   ADAMTS-like 3 precursor 
ADAMTSL1              0.085   ADAMTS-like 1 isoform 4 precursor 
ADAMTSL1              0.085   ADAMTS-like 1 isoform 2 precursor 
ADAMTSL4              0.084   thrombospondin repeat containing 1 isoform 1 
ADAMTSL4              0.084   thrombospondin repeat containing 1 isoform 2 
THSD4                 0.078   thrombospondin, type I, domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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